mRNA_P-wetherbeei_contig5801.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5801.2.1
Unique NamemRNA_P-wetherbeei_contig5801.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5801.2.1 vs. uniprot
Match: A0A7S4D790_HETAK (tRNA pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D790_HETAK)

HSP 1 Score: 115 bits (288), Expect = 1.680e-25
Identity = 72/184 (39.13%), Postives = 89/184 (48.37%), Query Frame = 2
Query: 1031 YRAPPARLAALRAALKQLEGTRNFHNYTAKRRAGDPACHRYIISTEVGEPFVVAGGDGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSGSSHGDGGXXXXXXXXXXGLEWAAITVTGQSFLLHQIRKMVAVATDVARGGCSAADVARTFGNVKVXXAPAPGAGLFLDMLFFDEYNRNLATE 1582
            YRAPP +LAAL +AL    GT NFHN+T++R A D +CHRYI+S + GEP+V                                          HG               EW  +TV GQSFLL+QIRK+VA+A  VARG  +   V       K     APG GL+LD LFFD YN+NLA +
Sbjct:   27 YRAPPEKLAALASALAGYRGTHNFHNFTSRRAATDKSCHRYIMSFDTGEPWV----------------------------------------DDHGT--------------EWVCLTVLGQSFLLNQIRKLVALAVQVARGAQTRGAVRTALSKKKHCLPMAPGDGLYLDSLFFDAYNKNLAKD 156          
BLAST of mRNA_P-wetherbeei_contig5801.2.1 vs. uniprot
Match: A0A835YJ34_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ34_9STRA)

HSP 1 Score: 110 bits (274), Expect = 2.320e-21
Identity = 163/532 (30.64%), Postives = 199/532 (37.41%), Query Frame = 2
Query:  380 GGEA--------AMTAAINARLPPAVRVMDVRRVTGSFDARNACTRRRYRYLLPTALLMPRAEAAALLGRAEAMAAGGEASEXXXXXXXXXXXXXXEASXXXXEVVAXXXXXEEMVVERVSAEFGAAATNRAATANGDTAVKHREQGTGGGEAM---------ANNXXXXXXXXXXXXXXXXXXAGTSRCGRSRGVGGSICDDXXXXXXXXXXGCG-------------KYALPPAVRTAAFAELAAYRAPPARLAALRAALKQLEGTRNFHNYTAKRRAGDPACHRYIISTEVGEPFVVAGGDGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSGSSHGDGGXXXXXXXXXXGLEWAAITVTGQSFLLHQIRKMVAVATDVARGGCSAADVARTFGNVKVXXAPAPGAGLFLDMLFFDEYNRNLATETGRRPLRWGAESEPGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNATEEWVPDAADAASAAAVDAFRRERIVGHIVRSPAARARFVGWMDAMRHSPPNYA 1885
            GGEA        A+   +NA LP A+RV+ V RVTG F+A+NACT RRY YLLPT  L        LL  A+A  A    S         XXXXXX   X     V                          A +   +A+     G G              A        XXXXXXXXXXXX                   XXXXXXX   G G             ++   PAV      +L  +R  P +LA LR  L    GT+N+HNYT +R A DP+C R + S   GEPFV                                                         G+EW  ++V GQSF+LHQIRKMVA A DV R   S  D+ R+     +    AP  GLFLD LFF  Y             R+GA                                   +AT     + +  A+AA V A R +RIV HIV   AA  +F  W+D M   P NY+
Sbjct:  197 GGEAEDEAAQHEAIRTGVNAHLPDAIRVLKVARVTGGFNAKNACTGRRYAYLLPTCTLAAPEYIDGLLAEAKAWEASQPRSAGDNVDVAAXXXXXXXXXXAAPMAVVEPAENPAXXXXXXXXXXXXXXXXVTAASADQSALPGSSHGNGXXXXXXXXXXXXXXAGTNATAATXXXXXXXXXXXXXXXXXXXXXXXXAPXXXXXXXXXXXXEREGAGXXXXXXXPEGEEKRWLSSPAVIARVAEKLRTFRITPEKLARLREVLALFRGTKNYHNYTIRRAATDPSCSRVMRSFTAGEPFV-------------------------------------------------------RGGVEWVLLSVEGQSFMLHQIRKMVATAVDVVRAQASVEDMQRSLTQAHMILGLAPSKGLFLDKLFFSMYEE-----------RYGAA----------------------------------DATSLKCREGS--AAAARVTAMR-DRIVSHIVDGEAAHLQFCAWLDYMSKFPKNYS 625          
BLAST of mRNA_P-wetherbeei_contig5801.2.1 vs. uniprot
Match: D8LBC7_ECTSI (tRNA Pseudouridine Synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBC7_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 1.240e-20
Identity = 112/439 (25.51%), Postives = 155/439 (35.31%), Query Frame = 2
Query:  341 STQLICLKLAYPDGGEAAMTAAINARLPPAVRVMDVRRVTGSFDARNACTRRRYRYLLPTALLMPRAEAAALLGRA----EAMAAGGEASEXXXXXXXXXXXXXXEASXXXXEVVAXXXXXEEMVVERVSAEFGAAATNRAATANGDTAVKHREQGTGGGEAMANNXXXXXXXXXXXXXXXXXXAGTSRCGRSRGVGGSICDDXXXXXXXXXXGCGKYALPPAVRTAAFA------------ELAAYRAPPARLAALRAALKQLEGTRNFHNYTAKRRAGDPACHRYIISTEVGEPFVVAGGDGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSGSSHGDGGXXXXXXXXXXGLEWAAITVTGQSFLLHQIRKMVAVATDVARGGCSAADVARTFGNVKVXXAPAPGAGLFLDMLFFDEYNRNLATETGR-RPLRW 1606
            + Q+I +KL Y + GE      IN  LP  +R +D+RR   SFD+R  C+ RRY Y++PT +L P+A    L   A     A A GG++S                 S                  +  +A  GA   +  A     T             A +                      +   GRS   G    DD          G G       +R AA              +L  YR  P RL  LR  LK   GT+N+HNYT  ++A D +C R I S    +PF                                                          G+EW  +TV GQSF++HQIRKMVA   D  RG  +  D  ++F   K+    AP  GL+L+   ++ YN+++       R L W
Sbjct:  256 AAQVISVKLTYLNDGERETVEKINKYLPDDIRAVDIRRAPKSFDSRTRCSGRRYEYIMPTYVLAPKAYVTDLFETALEWEMAHAGGGDSSAVDDLGETADISAVAGGSIQVDAAQLAAGSPPPEAAQAENASSGAVLPSAGAVG---TEASGLTDAADAAAAASMETPAAGRRQGHAVGAADDDGASEYSGRSDTEG----DDDDGNSQQEYEGSGDEGKEARLRQAAVELSSPAVVQRVAEQLKGYRLKPDRLEDLRETLKGFLGTKNYHNYTNHKKATDASCKRLITSFTASDPF-------------------------------------------------------EHEGMEWIRLTVGGQSFIMHQIRKMVASTVDRVRGQSNPEDFTKSFLPEKINLGIAPSDGLYLERPLYEPYNKDVKRAKAHDRLLEW 632          
BLAST of mRNA_P-wetherbeei_contig5801.2.1 vs. uniprot
Match: A0A6U2S3D4_9STRA (tRNA pseudouridine synthase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2S3D4_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.550e-20
Identity = 67/196 (34.18%), Postives = 86/196 (43.88%), Query Frame = 2
Query: 1019 ELAAYRAPPARLAALRAALKQLEGTRNFHNYTAKRRAGDPACHRYIISTEVGEPFVVAGGDGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSGSSHGDGGXXXXXXXXXXGLEWAAITVTGQSFLLHQIRKMVAVATDVARGGCSAADVARTFGNVKVXXAPAPGAGLFLDMLFFDEYNRNLATETGRRPLRW 1606
            +L+ YR P  RL  LRAALK+ EGT ++HNYT  + + D +  RY++S    +P V                                                         G EW    V GQSFLLHQIRKMV +AT+VARG         TF N+K+  A AP  GLFLDM +FD YN +   +    P+ W
Sbjct:    2 QLSKYRVPSDRLEKLRAALKRYEGTHSYHNYTNGKTSDDKSAKRYMMSFIALDPVV------------------------------------------------------DEFGTEWIPTQVVGQSFLLHQIRKMVCMATEVARGATDMDAFESTFTNIKIPTATAPAQGLFLDMSYFDAYNNDKRHQI-ENPILW 142          
BLAST of mRNA_P-wetherbeei_contig5801.2.1 vs. uniprot
Match: A0A7S1TVP3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVP3_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.350e-18
Identity = 71/207 (34.30%), Postives = 93/207 (44.93%), Query Frame = 2
Query:  989 PPAVRTAAFAELAAYRAPPARLAALRAALKQLEGTRNFHNYTAKRRAGDPA-CHRYIISTEVGEPFVVAGGDGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSGSSHGDGGXXXXXXXXXXGLEWAAITVTGQSFLLHQIRKMVAVATDVARGGCSAADVARTFGNVKVXXAPAPGAGLFLDMLFFDEYNRNLATETGRRPLRW 1606
            PP V+    AELA YR    ++  L+  +K  EGT  +HNYT  +     A C RYI   +V +P+V +                                                       G+EW  IT+ GQSFLL+QIRKMVA+  +V RG C+   + R+F  VK+    AP  GLFL+  FFDEYNR LA +  R PL W
Sbjct:  383 PPEVKAEVAAELAKYRVTEEQMDKLKDVVKAFEGTHRYHNYTQIKAVKTFASCLRYIKHMDVSDPYVPS---------------------------------------------------EDPSGMEWVRITLIGQSFLLNQIRKMVAMMAEVTRGQCTMEKMERSFAEVKMDLDIAPPTGLFLEKPFFDEYNRRLADD--RMPLGW 536          
BLAST of mRNA_P-wetherbeei_contig5801.2.1 vs. uniprot
Match: A0A7S2MCN9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MCN9_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 3.080e-18
Identity = 75/209 (35.89%), Postives = 88/209 (42.11%), Query Frame = 2
Query: 1007 AAFAELAAYRAPPARLAALRAALKQLEGTRNFHNYTAKRRAGDPACHRYIISTEVGEPFVVAGGDGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSGSSHGDGGXXXXXXXXXXGLEWAAITVTGQSFLLHQIRKMVAVATDVARGGCSAADVAR--TFGNVKVXXAPAPGAGLFLDMLFFDEYNRNLATETGRRPLRWGAESEPG 1627
            AA  E AAYR  P  L   R AL   EGT +FHNYT+ ++  DP   R I S   G+PFV                                                         G EW  +T+ GQSFLLHQIRKMVA A D+A    S A  A   TFG+ KV    AP  GLFL   FF+ YN +    TG RPLR   + + G
Sbjct:  287 AAAPEAAAYRVTPNLLDGFRLALSLFEGTHHFHNYTSSKKFSDPQSQRNIHSVSCGDPFV------------------------------------------------------REDGREWVVVTIMGQSFLLHQIRKMVATAIDLAHKQRSEATAAMETTFGDNKVLLPLAPSLGLFLHRPFFEPYNAHF---TGDRPLRRNLDDQQG 438          
BLAST of mRNA_P-wetherbeei_contig5801.2.1 vs. uniprot
Match: A0A1V6NSK4_PENDC (PseudoU_synth_1 domain-containing protein n=1 Tax=Penicillium decumbens TaxID=69771 RepID=A0A1V6NSK4_PENDC)

HSP 1 Score: 99.4 bits (246), Expect = 5.840e-18
Identity = 68/202 (33.66%), Postives = 93/202 (46.04%), Query Frame = 2
Query:  995 AVRTAAFAELAAYRAPPARLAALRAALKQLEGTRNFHNYTAKRRAGDPACHRYIISTEVGEPFVVAGGDGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSGSSHGDGGXXXXXXXXXXGLEWAAITVTGQSFLLHQIRKMVAVATDVARGGCSAADVARTFGNVKVXXAPAPGAGLFLDMLFFDEYNRNLATETGRRPL 1600
            A++TA      AYR PP+R+A L+ AL +  GT+NFHNYT ++   DP+  RYI S  V    +V  G                                                       EW ++ V GQSF++HQIRKMVA+AT V R GC+A  +  T+G  ++    APG GL L+   FD YN+  A   GR+P+
Sbjct:  416 AIKTAYTTARRAYRVPPSRVARLQEALDRYVGTKNFHNYTIQKTHTDPSAKRYIKSFNVDPTPIVINGT------------------------------------------------------EWLSLKVHGQSFMMHQIRKMVAMATLVVRSGCTADRIDDTYGPHRIAIPKAPGLGLLLERPIFDTYNQK-AEGLGRQPV 562          
BLAST of mRNA_P-wetherbeei_contig5801.2.1 vs. uniprot
Match: A0A8J5QLP7_9ASCO (PUS1 n=1 Tax=[Candida] subhashii TaxID=561895 RepID=A0A8J5QLP7_9ASCO)

HSP 1 Score: 97.1 bits (240), Expect = 2.260e-17
Identity = 65/198 (32.83%), Postives = 89/198 (44.95%), Query Frame = 2
Query: 1028 AYRAPPARLAALRAALKQLEGTRNFHNYTAKRRAGDPACHRYIISTEVGEPFVVAGGDGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSGSSHGDGGXXXXXXXXXXGLEWAAITVTGQSFLLHQIRKMVAVATDVARGGCSAADVARTFGNVKVXXAPAPGAGLFLDMLFFDEYNRNLATETGRRPLRWGAESE 1621
            AYR P  RL+  R+A++Q +GT NFHN+T  +   D +  RYIIST+V +PFV+ G D                                                      EW +I + GQSF+LHQIRKMV++A+ V R GC    +   F   K+    AP  GL L+   FD YN+ L T+    P+ +G   E
Sbjct:  328 AYRIPNNRLSQFRSAMEQYQGTHNFHNFTIGKSFKDQSAQRYIISTKVSDPFVIEGTD-----------------------------------------------------TEWISIRIHGQSFMLHQIRKMVSMASMVVRIGCPVEIIQDFFNKEKINIPKAPALGLLLENPVFDAYNQML-TKLEYDPIEFGKYDE 471          
BLAST of mRNA_P-wetherbeei_contig5801.2.1 vs. uniprot
Match: C4JEG8_UNCRE (PseudoU_synth_1 domain-containing protein n=1 Tax=Uncinocarpus reesii (strain UAMH 1704) TaxID=336963 RepID=C4JEG8_UNCRE)

HSP 1 Score: 97.1 bits (240), Expect = 2.460e-17
Identity = 63/201 (31.34%), Postives = 89/201 (44.28%), Query Frame = 2
Query:  998 VRTAAFAELAAYRAPPARLAALRAALKQLEGTRNFHNYTAKRRAGDPACHRYIISTEVGEPFVVAGGDGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSGSSHGDGGXXXXXXXXXXGLEWAAITVTGQSFLLHQIRKMVAVATDVARGGCSAADVARTFGNVKVXXAPAPGAGLFLDMLFFDEYNRNLATETGRRPL 1600
            VR A F    AYR PPARLA ++  L    GTRNFHNYT ++   DP+  R I S ++ +  ++ GG                                                       EW ++ V GQSF++HQIRKMVA+A  + R G     +A+++G  K+    APG GL L+   FD YN+    + G+ P+
Sbjct:  338 VRAAYFKAKRAYRIPPARLARVQEVLDLYVGTRNFHNYTIQKTFRDPSAKRVIKSFKISKDPIIIGGT------------------------------------------------------EWLSLKVHGQSFMMHQIRKMVAMAALIVRCGSDPQLIAQSYGPPKIPIPKAPGLGLLLERPIFDTYNKKATKDLGKNPI 484          
BLAST of mRNA_P-wetherbeei_contig5801.2.1 vs. uniprot
Match: A0A7S3GQ99_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GQ99_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 2.560e-17
Identity = 63/185 (34.05%), Postives = 84/185 (45.41%), Query Frame = 2
Query: 1013 FAELAAYRAPPARLAALRAALKQLEGTRNFHNYTAKRRAGDPACHRYIISTEVGEPFVVAGGDGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSGSSHGDGGXXXXXXXXXXGLEWAAITVTGQSFLLHQIRKMVAVATDVARGGCSAADVARTFGNVKVXXAPAPGAGLFLDMLFFDEYNR 1567
            + ++ ++R+   ++A LRAALK  EGTR +HN+T  +   D    R+IIS E GEPFV  G                                                      G EW  +TV GQSFLL+QIRKMVA+A +V RG    + +   F N K+    AP  GL+L  LFFD YN+
Sbjct:  226 YGQVKSHRSTSEQIATLRAALKSYEGTRAYHNFTTGKHPEDANAKRFIISFEAGEPFVDEG-----------------------------------------------------TGAEWVLLTVLGQSFLLNQIRKMVAMAVEVTRGAAQLSTIMDAFTNRKMDLPMAPALGLYLGELFFDGYNK 357          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5801.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4D790_HETAK1.680e-2539.13tRNA pseudouridine synthase n=1 Tax=Heterosigma ak... [more]
A0A835YJ34_9STRA2.320e-2130.64Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
D8LBC7_ECTSI1.240e-2025.51tRNA Pseudouridine Synthase n=2 Tax=Ectocarpus Tax... [more]
A0A6U2S3D4_9STRA1.550e-2034.18tRNA pseudouridine synthase n=1 Tax=Leptocylindrus... [more]
A0A7S1TVP3_9STRA1.350e-1834.30Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2MCN9_9STRA3.080e-1835.89Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1V6NSK4_PENDC5.840e-1833.66PseudoU_synth_1 domain-containing protein n=1 Tax=... [more]
A0A8J5QLP7_9ASCO2.260e-1732.83PUS1 n=1 Tax=[Candida] subhashii TaxID=561895 RepI... [more]
C4JEG8_UNCRE2.460e-1731.34PseudoU_synth_1 domain-containing protein n=1 Tax=... [more]
A0A7S3GQ99_9STRA2.560e-1734.05Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5801contigP-wetherbeei_contig5801:1447..3697 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog33188.XP_002541293.1
Preferred namePUS1
PFAMsPseudoU_synth_1
Model size2019
Max annot lvl4751|Fungi
KEGG koko:K06173,ko:K15452
Hectar predicted targeting categoryother localisation
GOsGO:0001522,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016073,GO:0016556,GO:0016853,GO:0016866,GO:0031119,GO:0031120,GO:0034470,GO:0034641,GO:0034660,GO:0040031,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0106032,GO:0140098,GO:1901360,GO:1901363,GO:1990481
Exons2
Evalue6.77e-18
EggNOG OGsCOG0101@1|root,KOG2553@2759|Eukaryota,38F38@33154|Opisthokonta,3NVYM@4751|Fungi,3QNKA@4890|Ascomycota,20D02@147545|Eurotiomycetes,3B0JS@33183|Onygenales
Ec32 ortholog descriptiontRNA Pseudouridine Synthase
Ec32 orthologEc-27_004410.1
EC5.4.99.12,5.4.99.44
DescriptiontRNA pseudouridine synthase
Cds size1599
COG categoryJ
BiGG ReactioniMM904.YGL063W,iND750.YGL063W
BRITEko00000,ko01000,ko03016
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186860.0078287-UTR-P-wetherbeei_contig5801:1446..14721683186860.0078287-UTR-P-wetherbeei_contig5801:1446..1472Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5801 1447..1472 -
1683186860.0381823-UTR-P-wetherbeei_contig5801:3303..36971683186860.0381823-UTR-P-wetherbeei_contig5801:3303..3697Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5801 3304..3697 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186860.019408-CDS-P-wetherbeei_contig5801:1472..19651683186860.019408-CDS-P-wetherbeei_contig5801:1472..1965Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5801 1473..1965 -
1683186860.028612-CDS-P-wetherbeei_contig5801:2197..33031683186860.028612-CDS-P-wetherbeei_contig5801:2197..3303Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5801 2198..3303 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5801.2.1prot_P-wetherbeei_contig5801.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5801 1473..3303 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5801.2.1

>prot_P-wetherbeei_contig5801.2.1 ID=prot_P-wetherbeei_contig5801.2.1|Name=mRNA_P-wetherbeei_contig5801.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=533bp
MTAAINARLPPAVRVMDVRRVTGSFDARNACTRRRYRYLLPTALLMPRAE
AAALLGRAEAMAAGGEASEAAAAAREAPEAAAGEASEATEEVVAAKEAGE
EMVVERVSAEFGAAATNRAATANGDTAVKHREQGTGGGEAMANNGGRTLS
GSAAASLRGSAAAGTSRCGRSRGVGGSICDDEDEEEDDDDDGCGKYALPP
AVRTAAFAELAAYRAPPARLAALRAALKQLEGTRNFHNYTAKRRAGDPAC
HRYIISTEVGEPFVVAGGDGDGGGGSGGDSGGGGGDSGGGDSGGGISGGD
CSSGSSHGDGGSTSDDDGGGGGLEWAAITVTGQSFLLHQIRKMVAVATDV
ARGGCSAADVARTFGNVKXXXAPAPGAGLFLDMLFFDEYNRNLATETGRR
PLRWGAESEPGTGTGAGTESGNGTGTKEGAGIAPEPAKAKANATEEWVPD
AADAASAAAVDAFRRERIVGHIVRSPAARARFVGWMDAMRHSPPNYAAVA
EGAAGGGGGGGGGGASTASSGAAPSGASPADA*
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mRNA from alignment at P-wetherbeei_contig5801:1447..3697-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5801.2.1 ID=mRNA_P-wetherbeei_contig5801.2.1|Name=mRNA_P-wetherbeei_contig5801.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2251bp|location=Sequence derived from alignment at P-wetherbeei_contig5801:1447..3697- (Phaeothamnion wetherbeei SAG_119_79)
CGCGCACCGACAAGGGAGTCCACGCTGCAGCGCAGGTGGGGTTGCTGTTC TCCCTCTCCTACTCCAACCATCCAAGGTTTTTTGTTCGAAAGAATAAATT ACTGTAATCCATGCAGCACCTCAGCATTTCTCATACGGCCTGGTGCAGCA GGCTGAGGCCCTCGTAGCTGGTTATTCCGGCACTGGTCCCGTAAGAACCA TTTTAGGCCTGCCGTTCGTTCCGCAGGCGTAGAGGTTGTGAGACGAACTG CCTTGATGCACTTCCTTCTGACGTTCTTTTTTCCGCCGTTGCGCACGCAC GCATGCACATGCCGGCCCTTTCTGTCCTCCGGCCGCACAATCAACCCAGC TGATTTGCCTCAAGCTAGCCTACCCAGACGGCGGCGAGGCGGCCATGACA GCGGCCATCAACGCCCGCCTGCCGCCGGCGGTCCGGGTCATGGACGTGCG GCGCGTGACGGGTTCGTTCGACGCTCGCAACGCCTGCACGCGGCGCCGCT ACCGCTACCTGCTCCCGACGGCACTGCTGATGCCACGCGCCGAGGCTGCC GCGCTGTTGGGGCGGGCCGAGGCGATGGCGGCCGGGGGGGAAGCGTCGGA GGCGGCGGCAGCAGCAAGAGAGGCTCCAGAGGCGGCGGCGGGGGAGGCGT CAGAGGCGACGGAGGAGGTGGTGGCAGCAAAGGAAGCCGGAGAGGAGATG GTGGTGGAAAGGGTGAGCGCTGAATTTGGAGCCGCTGCAACAAACCGCGC CGCGACAGCAAATGGAGATACGGCAGTAAAACACAGGGAGCAGGGCACTG GTGGAGGCGAAGCAATGGCGAACAACGGCGGCAGGACCCTTAGCGGGAGC GCCGCGGCTAGCCTTCGCGGGAGCGCCGCCGCTGGGACTTCTCGCTGCGG CCGAAGCCGGGGCGTAGGCGGCTCCATTTGCGACGACGAAGACGAAGAGG AAGACGACGACGACGACGGCTGCGGCAAATACGCGCTGCCACCCGCCGTC CGCACCGCCGCCTTCGCCGAGCTGGCGGCGTACCGCGCCCCGCCGGCACG GCTGGCGGCGCTGCGCGCGGCACTGAAGCAGCTGGAGGGCACGCGCAACT TTCACAATTACACGGCGAAACGGCGCGCCGGCGATCCGGCCTGCCACCGC TACATCATCTCGACCGAGGTCGGCGAGCCGTTCGTGGTAGCGGGCGGTGA CGGTGATGGCGGCGGCGGTAGCGGCGGCGATAGCGGCGGCGGCGGCGGCG ATAGCGGCGGCGGCGATAGCGGCGGCGGCATTAGCGGTGGTGACTGTAGC AGTGGCAGTAGCCACGGCGATGGCGGCAGCACTAGTGATGACGACGGGGG CGGCGGCGGTTTGGAGTGGGCGGCGATCACGGTGACGGGGCAGAGCTTCC TGCTGCATCAGATCCGCAAGATGGTGGCGGTGGCAACGGACGTGGCGCGG GGCGGCTGCAGCGCTGCGGACGTCGCTCGAACCTTTGGCAACGTTAAGGT GAGTTTAGCGAATGAGGCGGAGACGTCGCACCGCTGTTTGGAGGAGCATT TAGTTGCTTCTGTCGTGTAGTACCTGTAGGCTCTTCCTTGCTTCCTGCCT TCTCCAAATCCGCCGCGACTCCGGGTCGTCGGCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCGCGCGCCCCCCGGGGCCCCCCTTTTCCCTC GGCCCCTCTTCTTCTGCGACCCACCATCNNNNNNNNNNTGCGCCGGCGCC TGGCGCGGGCCTCTTTCTCGACATGCTCTTCTTTGACGAGTACAACCGCA ATCTTGCCACAGAGACTGGCCGCCGCCCACTGCGCTGGGGCGCCGAGAGC GAACCCGGGACCGGAACTGGAGCCGGAACTGAGAGCGGGAACGGGACCGG AACCAAAGAAGGCGCGGGAATTGCGCCAGAGCCGGCAAAGGCGAAAGCAA ACGCGACGGAAGAATGGGTCCCGGACGCGGCCGATGCGGCGTCAGCGGCG GCGGTGGACGCGTTCCGGCGGGAGCGAATCGTGGGGCACATCGTGCGGAG CCCGGCGGCGCGGGCCCGGTTTGTGGGATGGATGGACGCGATGCGGCACT CGCCGCCGAATTACGCGGCTGTGGCGGAGGGAGCCGCAGGCGGCGGCGGC GGCGGCGGCGGCGGCGGCGCAAGCACGGCTTCTAGCGGCGCCGCACCAAG CGGCGCGAGTCCAGCCGATGCGTAATCGTAATATCTACGCTGATCCCACC C
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5801:1447..3697-

>mRNA_P-wetherbeei_contig5801.2.1 ID=mRNA_P-wetherbeei_contig5801.2.1|Name=mRNA_P-wetherbeei_contig5801.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1599bp|location=Sequence derived from alignment at P-wetherbeei_contig5801:1447..3697- (Phaeothamnion wetherbeei SAG_119_79)
ATGACAGCGGCCATCAACGCCCGCCTGCCGCCGGCGGTCCGGGTCATGGA
CGTGCGGCGCGTGACGGGTTCGTTCGACGCTCGCAACGCCTGCACGCGGC
GCCGCTACCGCTACCTGCTCCCGACGGCACTGCTGATGCCACGCGCCGAG
GCTGCCGCGCTGTTGGGGCGGGCCGAGGCGATGGCGGCCGGGGGGGAAGC
GTCGGAGGCGGCGGCAGCAGCAAGAGAGGCTCCAGAGGCGGCGGCGGGGG
AGGCGTCAGAGGCGACGGAGGAGGTGGTGGCAGCAAAGGAAGCCGGAGAG
GAGATGGTGGTGGAAAGGGTGAGCGCTGAATTTGGAGCCGCTGCAACAAA
CCGCGCCGCGACAGCAAATGGAGATACGGCAGTAAAACACAGGGAGCAGG
GCACTGGTGGAGGCGAAGCAATGGCGAACAACGGCGGCAGGACCCTTAGC
GGGAGCGCCGCGGCTAGCCTTCGCGGGAGCGCCGCCGCTGGGACTTCTCG
CTGCGGCCGAAGCCGGGGCGTAGGCGGCTCCATTTGCGACGACGAAGACG
AAGAGGAAGACGACGACGACGACGGCTGCGGCAAATACGCGCTGCCACCC
GCCGTCCGCACCGCCGCCTTCGCCGAGCTGGCGGCGTACCGCGCCCCGCC
GGCACGGCTGGCGGCGCTGCGCGCGGCACTGAAGCAGCTGGAGGGCACGC
GCAACTTTCACAATTACACGGCGAAACGGCGCGCCGGCGATCCGGCCTGC
CACCGCTACATCATCTCGACCGAGGTCGGCGAGCCGTTCGTGGTAGCGGG
CGGTGACGGTGATGGCGGCGGCGGTAGCGGCGGCGATAGCGGCGGCGGCG
GCGGCGATAGCGGCGGCGGCGATAGCGGCGGCGGCATTAGCGGTGGTGAC
TGTAGCAGTGGCAGTAGCCACGGCGATGGCGGCAGCACTAGTGATGACGA
CGGGGGCGGCGGCGGTTTGGAGTGGGCGGCGATCACGGTGACGGGGCAGA
GCTTCCTGCTGCATCAGATCCGCAAGATGGTGGCGGTGGCAACGGACGTG
GCGCGGGGCGGCTGCAGCGCTGCGGACGTCGCTCGAACCTTTGGCAACGT
TAAGGTNNNNNNTGCGCCGGCGCCTGGCGCGGGCCTCTTTCTCGACATGC
TCTTCTTTGACGAGTACAACCGCAATCTTGCCACAGAGACTGGCCGCCGC
CCACTGCGCTGGGGCGCCGAGAGCGAACCCGGGACCGGAACTGGAGCCGG
AACTGAGAGCGGGAACGGGACCGGAACCAAAGAAGGCGCGGGAATTGCGC
CAGAGCCGGCAAAGGCGAAAGCAAACGCGACGGAAGAATGGGTCCCGGAC
GCGGCCGATGCGGCGTCAGCGGCGGCGGTGGACGCGTTCCGGCGGGAGCG
AATCGTGGGGCACATCGTGCGGAGCCCGGCGGCGCGGGCCCGGTTTGTGG
GATGGATGGACGCGATGCGGCACTCGCCGCCGAATTACGCGGCTGTGGCG
GAGGGAGCCGCAGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGCAAGCAC
GGCTTCTAGCGGCGCCGCACCAAGCGGCGCGAGTCCAGCCGATGCGTAA
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