mRNA_P-wetherbeei_contig57928.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57928.1.1 vs. uniprot
Match: A0A7C4I8L3_9PROT (Response regulator n=3 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C4I8L3_9PROT) HSP 1 Score: 131 bits (329), Expect = 1.930e-33 Identity = 70/165 (42.42%), Postives = 98/165 (59.39%), Query Frame = 1
Query: 1 ATQMERAVTQFQEYQPDVLVLAFNTLAKADQYYLGLYRRSGDASICDHRSIVLCGKDDVATAYKRCIEGHFDDYALFWPMAQDAFRLPMAIRHALSERDRSRTTLSASGELISAARRLPQLEQSLIEQCVDGRQHAEYALARVLYEEQRLAATLNGVTDQVTVSE 495
+T +R+V F+ +P+VLVLAFN L KA++YYLGLYRR HR+++LC KDDV Y+ C + +FDDY LFWPM DA RLPMA+ HAL + SR + + EL + ARR+ +LE L + G+ E A + Q + A L+ ++T E
Sbjct: 48 STDPDRSVEDFERRKPEVLVLAFNALEKAERYYLGLYRRGTAVHALPHRTVILCNKDDVRRVYELCKKEYFDDYILFWPMTHDAPRLPMAVHHALRQMAASRAAPANTAELAAQARRIAELEAQLEQYAARGQARVEEASRSLRAAGQHIGAALDHFGRRLTEGE 212
BLAST of mRNA_P-wetherbeei_contig57928.1.1 vs. uniprot
Match: UPI00036A3834 (response regulator n=1 Tax=Aromatoleum toluclasticum TaxID=92003 RepID=UPI00036A3834) HSP 1 Score: 124 bits (312), Expect = 4.530e-31 Identity = 72/169 (42.60%), Postives = 95/169 (56.21%), Query Frame = 1
Query: 1 ATQMERAVTQFQEYQPDVLVLAFNTLAKADQYYLGLYRRSGDASICDHRSIVLCGKDDVATAYKRCIEGHFDDYALFWPMAQDAFRLPMAIRHALSERDRSRTTLSASG----ELISAARRLPQLEQSLIEQCVDGRQHAEYALARVLYEEQRLAATLNGVTDQVTVSE 495
+T+ +R+V F+ +P VL+LAF+TL KA++YYLGLYR S HR+++LC KDDV Y C + HFDDY LFWPM D RLPMA+ HAL R T A G EL ARR+ +LE L G H E A + Q + A L G + +++ E
Sbjct: 34 STEPDRSVQDFERCKPQVLILAFDTLEKAERYYLGLYRLSTLIHALPHRTLILCNKDDVRRVYALCKKEHFDDYILFWPMTHDTPRLPMAVIHAL----RQMTDAGADGPTVRELAVQARRIAELESQLARYATTGGLHVELANRSLQQAGQEIGAALEGFSRKLSGGE 198
BLAST of mRNA_P-wetherbeei_contig57928.1.1 vs. uniprot
Match: A0A521HMF4_9PROT (Response regulator n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521HMF4_9PROT) HSP 1 Score: 123 bits (308), Expect = 1.620e-30 Identity = 62/135 (45.93%), Postives = 83/135 (61.48%), Query Frame = 1
Query: 13 ERAVTQFQEYQPDVLVLAFNTLAKADQYYLGLYRRSGDASICDHRSIVLCGKDDVATAYKRCIEGHFDDYALFWPMAQDAFRLPMAIRHALSERDRSRTTLSASGELISAARRLPQLEQSLIEQCVDGRQHAEYA 417
ER V F+ +P VL+LAFN+L KA++YYLGLYR S HR+++LC +DD+ Y C + HFDDY LFWPM D RLPMA+ HAL + + A+ EL + ARR+ +LE + E G QH + A
Sbjct: 38 ERHVADFERCKPAVLILAFNSLEKAERYYLGLYRLSSVVHALPHRTLILCNQDDLRNVYDLCKKEHFDDYVLFWPMIHDTPRLPMAVIHALRQMSDGASGAPAARELAAQARRIAELELVINEYATRGEQHIKVA 172
BLAST of mRNA_P-wetherbeei_contig57928.1.1 vs. uniprot
Match: A0A7C9K8T5_9PROT (Response regulator n=1 Tax=Sulfuriferula multivorans TaxID=1559896 RepID=A0A7C9K8T5_9PROT) HSP 1 Score: 123 bits (308), Expect = 1.990e-30 Identity = 70/165 (42.42%), Postives = 97/165 (58.79%), Query Frame = 1
Query: 1 ATQMERAVTQFQEYQPDVLVLAFNTLAKADQYYLGLYRRSGDASICDHRSIVLCGKDDVATAYKRCIEGHFDDYALFWPMAQDAFRLPMAIRHALSERDRSRTTLSASG----ELISAARRLPQLEQSLIEQCVDGRQHAEYALARVLYEEQRLAATLNGVTDQV 483
+T AV F+ + PDVLVLAFNTLAKA++YYLGLYR SG + HR++VLC D+V+ AY+ C + +FDDY FWPM DA RL M++ H+L R +S G E + ARRL +L L + G Q + A + EQ + A L+G + ++
Sbjct: 44 STNQVLAVKDFESHVPDVLVLAFNTLAKAERYYLGLYRLSGKIHLHPHRTVVLCNMDEVSQAYQACRKQYFDDYVQFWPMTNDAPRLLMSVHHSL----RGLMAISEGGPSAAEFAAQARRLAELGSMLDQHVAQGSQKIDMANRAMAQAEQDIGAALDGFSSKL 204
BLAST of mRNA_P-wetherbeei_contig57928.1.1 vs. uniprot
Match: A0A838LTI5_9RHOO (Response regulator n=1 Tax=Rhodocyclaceae bacterium TaxID=1898103 RepID=A0A838LTI5_9RHOO) HSP 1 Score: 121 bits (304), Expect = 7.120e-30 Identity = 66/156 (42.31%), Postives = 91/156 (58.33%), Query Frame = 1
Query: 1 ATQMERAVTQFQEYQPDVLVLAFNTLAKADQYYLGLYRRSGDASICDHRSIVLCGKDDVATAYKRCIEGHFDDYALFWPMAQDAFRLPMAIRHALSERDRSRTTLSASGELISAARRLPQLEQSLIEQCVDGRQHAEYALARVLYEEQRLAATLNG 468
+T + A F+ Y+PDVLVLAF+ L KA++YYLGLYR HR+++LC K++V Y+ C + +FDDY LFWPM D RL MAI HAL E + + E + ARRL +LE L ++ +G QH A + EQ + A L+G
Sbjct: 38 STDADAAAKDFERYRPDVLVLAFDNLEKAERYYLGLYRLCPTVQQHIHRTVILCNKEEVKRVYELCKKNYFDDYVLFWPMTYDMSRLAMAIHHALRELATLKDDGPSVAEFAAQARRLVELEGLLEQRLAEGSQHLAGAGRAMAQAEQDIGAALDG 193
BLAST of mRNA_P-wetherbeei_contig57928.1.1 vs. uniprot
Match: A0A1M7KTP0_9BURK (Response regulator receiver domain-containing protein n=1 Tax=Duganella sacchari TaxID=551987 RepID=A0A1M7KTP0_9BURK) HSP 1 Score: 119 bits (299), Expect = 4.110e-29 Identity = 67/167 (40.12%), Postives = 96/167 (57.49%), Query Frame = 1
Query: 1 ATQMERAVTQFQEYQPDVLVLAFNTLAKADQYYLGLYRRSGDASICDHRSIVLCGKDDVATAYKRCIEGHFDDYALFWPMAQDAFRLPMAIRHALSERDRSRTTLSASGELISAARRLPQLEQSLIEQCVDGRQHAEYALARVLYEEQRLAATLNGVTDQVTVSERT 501
+T E++ F+++ PDVLVLAF +LA+A+++YLGLYR S+ HR+I+LCGKD+V K C++ HFDDY LFWPM DA RL MAI A E + E S ARRL +LE L + G V + E+ + A ++G + Q++ + T
Sbjct: 35 STVEEKSAADFEQHLPDVLVLAFKSLAQAERFYLGLYRHCARLSLQPHRTIILCGKDEVHRVAKLCLQQHFDDYVLFWPMNHDAPRLTMAIHLAYRELSKFNNDGPTLAEFASQARRLSELEGLLQQYMAAGLNQVSVTQQAVEHAEREINAVVDGWSRQLSQAANT 201
BLAST of mRNA_P-wetherbeei_contig57928.1.1 vs. uniprot
Match: UPI00198F3BBE (Response regulator n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI00198F3BBE) HSP 1 Score: 119 bits (298), Expect = 4.960e-29 Identity = 63/161 (39.13%), Postives = 99/161 (61.49%), Query Frame = 1
Query: 1 ATQMERAVTQFQEYQPDVLVLAFNTLAKADQYYLGLYRRSGDASICDHRSIVLCGKDDVATAYKRCIEGHFDDYALFWPMAQDAFRLPMAIRHALSERDRSRTTLSASGELISAARRLPQLEQSLIEQCVDGRQHAEYALARVLYEEQRLAATLNGVTDQV 483
+T ERAV F+E++PDVLVLAF+ L KA +YYLGLYR + HR+++LC KD+V + C + +FDDY L+WP+A D RL M+I A + R+ L EL++ AR L L+++L + VDG + + A + +L E+ + L+ ++++
Sbjct: 37 STLAERAVQDFEEFKPDVLVLAFDQLDKAQRYYLGLYRLGASLQLNLHRTVILCSKDEVQGVFDLCKKAYFDDYVLYWPLAYDGTRLAMSIWLAGRQVAAMRSNLPRPAELLAHARHLGDLDKALAREYVDGARRSNVAQSSMLEVERDMTGALDEFSERL 197
BLAST of mRNA_P-wetherbeei_contig57928.1.1 vs. uniprot
Match: UPI0019C78BFF (Response regulator n=1 Tax=Rhodoferax sp. TaxID=50421 RepID=UPI0019C78BFF) HSP 1 Score: 117 bits (293), Expect = 8.670e-29 Identity = 64/154 (41.56%), Postives = 90/154 (58.44%), Query Frame = 1
Query: 13 ERAVTQFQEYQPDVLVLAFNTLAKADQYYLGLYRRSGDASICDHRSIVLCGKDDVATAYKRCIEGHFDDYALFWPMAQDAFRLPMAIRHALSERDRSRTTLSASGELISAARRLPQLEQSLIEQCVDGRQHAEYALARVLYEEQRLAATLNGVT 474
++AV+ F+++ P VL+LAF+TL KA++Y L LYR+S HR+I LC KD+ AY C G FDDY LFWPM D+ RLPM+I AL E R ++ E + ARR+ ++E L + G Q E A V E R+ A +G++
Sbjct: 42 DKAVSDFEQHLPKVLLLAFDTLEKAERYSLNLYRQSDKIHAHPHRTITLCHKDEAKQAYTLCRSGSFDDYILFWPMTDDSARLPMSIHIALRELAVQRNGNPSAAEFAAQARRMAEMETLLQDSLASGDQRLETAGRAVAQAESRIGAVFDGLS 195
BLAST of mRNA_P-wetherbeei_contig57928.1.1 vs. uniprot
Match: A0A1I4HQ78_9PROT (Response regulator receiver domain-containing protein n=3 Tax=Nitrosomonas aestuarii TaxID=52441 RepID=A0A1I4HQ78_9PROT) HSP 1 Score: 117 bits (294), Expect = 1.970e-28 Identity = 64/160 (40.00%), Postives = 89/160 (55.62%), Query Frame = 1
Query: 4 TQMERAVTQFQEYQPDVLVLAFNTLAKADQYYLGLYRRSGDASICDHRSIVLCGKDDVATAYKRCIEGHFDDYALFWPMAQDAFRLPMAIRHALSERDRSRTTLSASGELISAARRLPQLEQSLIEQCVDGRQHAEYALARVLYEEQRLAATLNGVTDQV 483
T ++A F +++P+VLVL F L K+ +YYLGLYR + HR+IVLCGKD+V AYK C EG FDDY LFWPM D+ RLPM++ AL E R + + + + RRL LE+ L +Q G E V + A+ L + ++
Sbjct: 39 TDSDQASADFDQHRPEVLVLVFKELEKSQRYYLGLYREDCAVQLQPHRTIVLCGKDEVRQAYKLCREGIFDDYTLFWPMTIDSSRLPMSVCLALRELASLRVSSPTAADFAAQVRRLATLEKMLTDQLAQGDNRIEAIGQAVTHATNHAASALENFSQRL 198
BLAST of mRNA_P-wetherbeei_contig57928.1.1 vs. uniprot
Match: A0A1J5BCH5_9PROT (Response regulatory domain-containing protein n=3 Tax=Betaproteobacteria TaxID=28216 RepID=A0A1J5BCH5_9PROT) HSP 1 Score: 117 bits (292), Expect = 3.720e-28 Identity = 60/137 (43.80%), Postives = 85/137 (62.04%), Query Frame = 1
Query: 1 ATQMERAVTQFQEYQPDVLVLAFNTLAKADQYYLGLYRRSGDASICDHRSIVLCGKDDVATAYKRCIEGHFDDYALFWPMAQDAFRLPMAIRHALSERDRSRTTLSASGELISAARRLPQLEQSLIEQCVDGRQHAE 411
+T ++ F +PDVLVLAF+++ K++++ LGLYR S + HR+IVLCGK++V A++ C EG FDDY LFWPM DA RLPM++ AL E ++ E + ARRL LE+ L +Q G +H E
Sbjct: 38 STDPDQTAADFDRNRPDVLVLAFDSIEKSERHNLGLYRHSATIHVQPHRTIVLCGKEEVQRAFRLCREGIFDDYVLFWPMTHDAPRLPMSVHLALRELAGLAARAPSAEEFAAQARRLATLEELLSQQMARGEEHIE 174 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57928.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57928.1.1 >prot_P-wetherbeei_contig57928.1.1 ID=prot_P-wetherbeei_contig57928.1.1|Name=mRNA_P-wetherbeei_contig57928.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=164bp MERAVTQFQEYQPDVLVLAFNTLAKADQYYLGLYRRSGDASICDHRSIVLback to top mRNA from alignment at P-wetherbeei_contig57928:6..506- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57928.1.1 ID=mRNA_P-wetherbeei_contig57928.1.1|Name=mRNA_P-wetherbeei_contig57928.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig57928:6..506- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57928:6..506- >mRNA_P-wetherbeei_contig57928.1.1 ID=mRNA_P-wetherbeei_contig57928.1.1|Name=mRNA_P-wetherbeei_contig57928.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=492bp|location=Sequence derived from alignment at P-wetherbeei_contig57928:6..506- (Phaeothamnion wetherbeei SAG_119_79)back to top |