mRNA_P-wetherbeei_contig57793.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57793.1.1 vs. uniprot
Match: A0A346A3G8_9HYPH (ABC transporter permease n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A346A3G8_9HYPH) HSP 1 Score: 170 bits (431), Expect = 1.280e-50 Identity = 85/132 (64.39%), Postives = 105/132 (79.55%), Query Frame = 1
Query: 28 RNVPLLLLALAWEFASRTGLVSRSVLPALSEVVAAWGEMAVSGELMRHGAVSLYRSFAGLLLAVGFGVLLGVAMAWWKPVRLALSGLVEVFYPLPKSALIPVTALWLGFGDASKILLIFLACLLPVTVAAYN 423
R PLL+LA AWE +SR GLVS LP LS+VV+AW +M GEL+ +G S+YR+FAGL LAV G +LG+AMAW+KPV + L+ +VE+FYPLPKSALIPVT +WLGFGD SKILLIFL C+LPVT+ A+N
Sbjct: 6 RYSPLLILAAAWELSSRLGLVSPLALPPLSDVVSAWIDMIKDGELVTNGVTSIYRAFAGLALAVVIGGVLGIAMAWFKPVNVLLAPIVEIFYPLPKSALIPVTVIWLGFGDGSKILLIFLGCMLPVTIGAFN 137
BLAST of mRNA_P-wetherbeei_contig57793.1.1 vs. uniprot
Match: A0A1Q7BZM4_9PROT (ABC transmembrane type-1 domain-containing protein n=7 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A1Q7BZM4_9PROT) HSP 1 Score: 168 bits (425), Expect = 1.300e-49 Identity = 86/136 (63.24%), Postives = 105/136 (77.21%), Query Frame = 1
Query: 16 AILWRNVPLLLLALAWEFASRTGLVSRSVLPALSEVVAAWGEMAVSGELMRHGAVSLYRSFAGLLLAVGFGVLLGVAMAWWKPVRLALSGLVEVFYPLPKSALIPVTALWLGFGDASKILLIFLACLLPVTVAAYN 423
A L R +PLLLLALAWE +R+GL+S LP LS V AAW E+ GEL+ +GA SL+R+ AGL LA+ G LG+ MAWW+PV + LS LVE+FYP+PKSALIPVT LWLGFG+ SKILLIFL C+LPVT+ A+N
Sbjct: 10 AALLRYLPLLLLALAWEAGARSGLISTLALPPLSAVGAAWIELVRDGELISNGAASLWRAGAGLFLAIVIGGALGIVMAWWRPVNVLLSPLVEMFYPMPKSALIPVTVLWLGFGNGSKILLIFLGCMLPVTIGAFN 145
BLAST of mRNA_P-wetherbeei_contig57793.1.1 vs. uniprot
Match: A0A1W6ZPT0_9HYPH (ABC transmembrane type-1 domain-containing protein n=1 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZPT0_9HYPH) HSP 1 Score: 166 bits (420), Expect = 5.880e-49 Identity = 82/132 (62.12%), Postives = 101/132 (76.52%), Query Frame = 1
Query: 28 RNVPLLLLALAWEFASRTGLVSRSVLPALSEVVAAWGEMAVSGELMRHGAVSLYRSFAGLLLAVGFGVLLGVAMAWWKPVRLALSGLVEVFYPLPKSALIPVTALWLGFGDASKILLIFLACLLPVTVAAYN 423
R +PLL+LA+AWE ASR LVS LP LS+V+ AW ++ SGEL+ +GA SL+R+ AGL LA+ G LG+ MAWW+PV + LS LVE YP+PKSALIPVT +WLGFGD SKILLI L C+LPVT+ AYN
Sbjct: 6 RYLPLLILAVAWEAASRLQLVSSLALPPLSDVIVAWWDLLKSGELLTNGAASLWRASAGLFLAIVIGATLGIFMAWWRPVNVVLSPLVEALYPMPKSALIPVTVIWLGFGDGSKILLILLGCMLPVTIGAYN 137
BLAST of mRNA_P-wetherbeei_contig57793.1.1 vs. uniprot
Match: A0A537NA97_9PROT (ABC transporter permease n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NA97_9PROT) HSP 1 Score: 166 bits (420), Expect = 5.880e-49 Identity = 82/132 (62.12%), Postives = 104/132 (78.79%), Query Frame = 1
Query: 28 RNVPLLLLALAWEFASRTGLVSRSVLPALSEVVAAWGEMAVSGELMRHGAVSLYRSFAGLLLAVGFGVLLGVAMAWWKPVRLALSGLVEVFYPLPKSALIPVTALWLGFGDASKILLIFLACLLPVTVAAYN 423
R +PLL+LALAWE ++R GLVS LP LS+V AAW E+ GEL+ +GA SL+R+ AGL+LA+ G +G+ MAWW+PV + L LVE+FYP+PKSALIPVT LWLGFG+ SKILLIFL C+LPVT+ A+N
Sbjct: 6 RYLPLLILALAWEVSARAGLVSTLALPPLSDVAAAWLELVKDGELVTNGAASLWRAGAGLVLAIVIGAGVGIFMAWWRPVNVLLGPLVEMFYPMPKSALIPVTVLWLGFGNGSKILLIFLGCMLPVTIGAFN 137
BLAST of mRNA_P-wetherbeei_contig57793.1.1 vs. uniprot
Match: A0A1Q4BGE6_9HYPH (ABC transmembrane type-1 domain-containing protein n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A1Q4BGE6_9HYPH) HSP 1 Score: 163 bits (412), Expect = 9.250e-48 Identity = 83/132 (62.88%), Postives = 105/132 (79.55%), Query Frame = 1
Query: 28 RNVPLLLLALAWEFASRTGLVSRSVLPALSEVVAAWGEMAVSGELMRHGAVSLYRSFAGLLLAVGFGVLLGVAMAWWKPVRLALSGLVEVFYPLPKSALIPVTALWLGFGDASKILLIFLACLLPVTVAAYN 423
R PLL+LA+ WE +R+GLV+RS LP LS+V+ AW ++A + + + A SLYR+FAGL+LA+ G L+G+AMA KP+R L+ +VEVFYPLPKSALIPVTALWLG GDASKILLIFL C+LPVT+ AYN
Sbjct: 6 RYSPLLILAVLWEAVARSGLVARSALPPLSDVIVAWFQLAGTSDFWINAADSLYRTFAGLILAIVIGALIGIAMASSKPIRTLLNPIVEVFYPLPKSALIPVTALWLGLGDASKILLIFLGCMLPVTLGAYN 137
BLAST of mRNA_P-wetherbeei_contig57793.1.1 vs. uniprot
Match: A0A140GVX4_9HYPH (Taurine transport system permease protein TauC n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A140GVX4_9HYPH) HSP 1 Score: 161 bits (407), Expect = 6.060e-47 Identity = 78/132 (59.09%), Postives = 102/132 (77.27%), Query Frame = 1
Query: 28 RNVPLLLLALAWEFASRTGLVSRSVLPALSEVVAAWGEMAVSGELMRHGAVSLYRSFAGLLLAVGFGVLLGVAMAWWKPVRLALSGLVEVFYPLPKSALIPVTALWLGFGDASKILLIFLACLLPVTVAAYN 423
R +PL+LLA+AWE SR GLVS S LP LS+V+A+W ++ +GEL+ + SLYR+ AGL LA+ G LG+ MAW KPV + ++ +VE+FYPLPKSALIPVT +WLG GD SKILLIFL C++PVT+ A+N
Sbjct: 7 RYLPLVLLAIAWEAVSRLGLVSSSALPPLSDVIASWIDLIKTGELVSNAGASLYRAAAGLALAIVIGAALGIGMAWSKPVNVVVAPIVEIFYPLPKSALIPVTVIWLGLGDGSKILLIFLGCMIPVTIGAFN 138
BLAST of mRNA_P-wetherbeei_contig57793.1.1 vs. uniprot
Match: A0A1F4DUH2_9PROT (ABC transmembrane type-1 domain-containing protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4DUH2_9PROT) HSP 1 Score: 160 bits (405), Expect = 1.250e-46 Identity = 82/135 (60.74%), Postives = 103/135 (76.30%), Query Frame = 1
Query: 19 ILWRNVPLLLLALAWEFASRTGLVSRSVLPALSEVVAAWGEMAVSGELMRHGAVSLYRSFAGLLLAVGFGVLLGVAMAWWKPVRLALSGLVEVFYPLPKSALIPVTALWLGFGDASKILLIFLACLLPVTVAAYN 423
+L R PLLLLA+ W+ A +VS + LP+L +V +AW ++ SGEL+R+ A SLYR AG LLAV G LG+ MAWW+P+ L LS LVE+FYPLPK+ALIPVT +WLGFGDASKILLIFL C+LPVT+ A+N
Sbjct: 4 LLARYSPLLLLAVLWQLAWYFEMVSSTALPSLVDVASAWVDLLRSGELLRNAAASLYRGGAGFLLAVVVGGALGMIMAWWRPLNLMLSPLVEIFYPLPKTALIPVTVIWLGFGDASKILLIFLGCMLPVTIGAFN 138
BLAST of mRNA_P-wetherbeei_contig57793.1.1 vs. uniprot
Match: A0A1E4PQ18_9BURK (ABC transmembrane type-1 domain-containing protein n=1 Tax=Rubrivivax sp. SCN 70-15 TaxID=1660139 RepID=A0A1E4PQ18_9BURK) HSP 1 Score: 160 bits (404), Expect = 1.580e-46 Identity = 86/136 (63.24%), Postives = 103/136 (75.74%), Query Frame = 1
Query: 16 AILWRNVPLLLLALAWEFASRTGLVSRSVLPALSEVVAAWGEMAVSGELMRHGAVSLYRSFAGLLLAVGFGVLLGVAMAWWKPVRLALSGLVEVFYPLPKSALIPVTALWLGFGDASKILLIFLACLLPVTVAAYN 423
A L R PLL+LA AWE R GLVS SVLP+L +VV AW + SG+L + AVSLYR+ AGL LAV G +LG+AMAW++PV S LVE+ YP+PKSALIPVTA+WLGFGD SKILLIFL C+LPVT+ A+N
Sbjct: 3 AALVRYAPLLILAAAWEAVVRFGLVSDSVLPSLVDVVRAWFGLMKSGDLWLNTAVSLYRAGAGLALAVVVGAVLGIAMAWYRPVNALASPLVEMLYPMPKSALIPVTAVWLGFGDGSKILLIFLGCMLPVTLGAFN 138
BLAST of mRNA_P-wetherbeei_contig57793.1.1 vs. uniprot
Match: A0A537QZ16_9PROT (ABC transporter permease n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537QZ16_9PROT) HSP 1 Score: 159 bits (402), Expect = 3.440e-46 Identity = 81/141 (57.45%), Postives = 104/141 (73.76%), Query Frame = 1
Query: 1 MTSSVAILWRNVPLLLLALAWEFASRTGLVSRSVLPALSEVVAAWGEMAVSGELMRHGAVSLYRSFAGLLLAVGFGVLLGVAMAWWKPVRLALSGLVEVFYPLPKSALIPVTALWLGFGDASKILLIFLACLLPVTVAAYN 423
M + IL R VPLLLLA+AWE +RTGLV + LP L V AAW ++AV G+L +G S+ R AGL LA+ G L+GV MAW+KPVR+A++ V+ FYP+PKSALIPV LWLGFGDASK+ IF+ CLLP+T++A+N
Sbjct: 1 MNAVAQILPRYVPLLLLAMAWEVVTRTGLVPTAALPPLDTVAAAWLDLAVGGDLWSNGVASISRGAAGLGLAICLGSLIGVLMAWYKPVRIAVNPTVQFFYPMPKSALIPVMVLWLGFGDASKVATIFIGCLLPITLSAFN 141
BLAST of mRNA_P-wetherbeei_contig57793.1.1 vs. uniprot
Match: A0A1Q7WM65_9PROT (ABC transmembrane type-1 domain-containing protein n=4 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A1Q7WM65_9PROT) HSP 1 Score: 158 bits (399), Expect = 1.440e-45 Identity = 80/136 (58.82%), Postives = 103/136 (75.74%), Query Frame = 1
Query: 16 AILWRNVPLLLLALAWEFASRTGLVSRSVLPALSEVVAAWGEMAVSGELMRHGAVSLYRSFAGLLLAVGFGVLLGVAMAWWKPVRLALSGLVEVFYPLPKSALIPVTALWLGFGDASKILLIFLACLLPVTVAAYN 423
A++ R +PLLLLAL WE +RTGLV S LP L V AW E+A SG+L +G S+ R AGL LA+ G L+G+ MAW+KPVR A++ +V+ FYP+PKSALIPV LWLGFGDASK++LIF+ CLLPVT++A+N
Sbjct: 20 AVVPRYLPLLLLALGWEALTRTGLVPTSALPPLDTVARAWYELASSGDLWTNGVASMTRGAAGLGLAIAGGSLIGILMAWYKPVRAAVNPIVQFFYPMPKSALIPVMVLWLGFGDASKVVLIFVGCLLPVTLSAFN 155 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57793.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57793.1.1 >prot_P-wetherbeei_contig57793.1.1 ID=prot_P-wetherbeei_contig57793.1.1|Name=mRNA_P-wetherbeei_contig57793.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=142bp MTSSVAILWRNVPLLLLALAWEFASRTGLVSRSVLPALSEVVAAWGEMAVback to top mRNA from alignment at P-wetherbeei_contig57793:16..441- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57793.1.1 ID=mRNA_P-wetherbeei_contig57793.1.1|Name=mRNA_P-wetherbeei_contig57793.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=426bp|location=Sequence derived from alignment at P-wetherbeei_contig57793:16..441- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57793:16..441- >mRNA_P-wetherbeei_contig57793.1.1 ID=mRNA_P-wetherbeei_contig57793.1.1|Name=mRNA_P-wetherbeei_contig57793.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=426bp|location=Sequence derived from alignment at P-wetherbeei_contig57793:16..441- (Phaeothamnion wetherbeei SAG_119_79)back to top |