mRNA_P-wetherbeei_contig5770.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5770.1.1 vs. uniprot
Match: A0A061SB07_9CHLO (Uncharacterized protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SB07_9CHLO) HSP 1 Score: 61.6 bits (148), Expect = 1.310e-9 Identity = 33/57 (57.89%), Postives = 37/57 (64.91%), Query Frame = 1
Query: 10 GPTDAAGIVADLSDRPLLAASRPCGGVYGEVVFASADHALYGVDVATGRPTRRLYGK 180
GP D G++ DLSDRP L AS G GE V S+DHALYGVDV +GR R LY K
Sbjct: 172 GPRDPQGLLTDLSDRPNLCASVDWGA--GEAVVGSSDHALYGVDVRSGRLRRTLYTK 226
BLAST of mRNA_P-wetherbeei_contig5770.1.1 vs. uniprot
Match: A0A5J4XZV4_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XZV4_9CHLO) HSP 1 Score: 57.8 bits (138), Expect = 2.890e-8 Identity = 32/60 (53.33%), Postives = 36/60 (60.00%), Query Frame = 1
Query: 1 WLLGPTDAAGIVADLSDRPLLAASRPCGGVYGEVVFASADHALYGVDVATGRPTRRLYGK 180
W GP D AG V +SD PL+ +S GEVV SADHALY VDV TG+ R LY K
Sbjct: 87 WRSGPADPAGRVCHVSDVPLMCSSINWSA--GEVVVGSADHALYVVDVQTGKKRRTLYTK 144
BLAST of mRNA_P-wetherbeei_contig5770.1.1 vs. uniprot
Match: A0A7R9YRK8_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9YRK8_9CHLO) HSP 1 Score: 56.6 bits (135), Expect = 7.530e-8 Identity = 27/57 (47.37%), Postives = 37/57 (64.91%), Query Frame = 1
Query: 10 GPTDAAGIVADLSDRPLLAASRPCGGVYGEVVFASADHALYGVDVATGRPTRRLYGK 180
GP+DAAG++ D+SDRP L ++ GE+V S+DHALY +D G+ R LY K
Sbjct: 42 GPSDAAGVLEDVSDRPSLCSAA--NWARGEIVVGSSDHALYVIDAVKGKRKRTLYSK 96
BLAST of mRNA_P-wetherbeei_contig5770.1.1 vs. uniprot
Match: A0A1Y1I2U3_KLENI (F-box and WD-40 domain protein 7 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I2U3_KLENI) HSP 1 Score: 55.1 bits (131), Expect = 2.680e-7 Identity = 31/61 (50.82%), Postives = 36/61 (59.02%), Query Frame = 1
Query: 1 WLLGPTDAAGIVADLSDRPLLAASRPCGGVYG-EVVFASADHALYGVDVATGRPTRRLYGK 180
W GP D AG V LS+ P+L C V G E V S+DHA+Y VD+ TGR R LYGK
Sbjct: 278 WNKGPMDEAGRVTKLSELPIL-----CMSVLGNEAVVGSSDHAVYTVDLDTGRKKRTLYGK 333
BLAST of mRNA_P-wetherbeei_contig5770.1.1 vs. uniprot
Match: A0A7S0SFL7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SFL7_9CHLO) HSP 1 Score: 53.1 bits (126), Expect = 6.770e-7 Identity = 28/60 (46.67%), Postives = 32/60 (53.33%), Query Frame = 1
Query: 1 WLLGPTDAAGIVADLSDRPLLAASRPCGGVYGEVVFASADHALYGVDVATGRPTRRLYGK 180
W P D +G V LSDRPL S G + V DHALY V+V +GR TR LY K
Sbjct: 45 WFTSPKDPSGRVTSLSDRPLSCGSLNPGQTHA--VIGGTDHALYEVEVRSGRKTRTLYSK 102
BLAST of mRNA_P-wetherbeei_contig5770.1.1 vs. uniprot
Match: C1EJE3_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EJE3_MICCC) HSP 1 Score: 48.9 bits (115), Expect = 4.010e-5 Identity = 25/58 (43.10%), Postives = 34/58 (58.62%), Query Frame = 1
Query: 1 WLLGPTDAAGIVADLSDRPLLAASRPCGGVYGEVVFASADHALYGVDVATGRPTRRLY 174
W GP DAAG+ L+D+P+ S G + +V S DHALY V +ATG+ TR +
Sbjct: 132 WYDGPIDAAGVRVALTDQPICVGSVNPRGTH--LVVGSTDHALYEVQLATGKKTRTFH 187 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5770.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5770.1.1 >prot_P-wetherbeei_contig5770.1.1 ID=prot_P-wetherbeei_contig5770.1.1|Name=mRNA_P-wetherbeei_contig5770.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=60bp WLLGPTDAAGIVADLSDRPLLAASRPCGGVYGEVVFASADHALYGVDVATback to top mRNA from alignment at P-wetherbeei_contig5770:53..232- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5770.1.1 ID=mRNA_P-wetherbeei_contig5770.1.1|Name=mRNA_P-wetherbeei_contig5770.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=180bp|location=Sequence derived from alignment at P-wetherbeei_contig5770:53..232- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5770:53..232- >mRNA_P-wetherbeei_contig5770.1.1 ID=mRNA_P-wetherbeei_contig5770.1.1|Name=mRNA_P-wetherbeei_contig5770.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=180bp|location=Sequence derived from alignment at P-wetherbeei_contig5770:53..232- (Phaeothamnion wetherbeei SAG_119_79)back to top |