mRNA_P-wetherbeei_contig5675.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5675.1.1 vs. uniprot
Match: D7FTF5_ECTSI (NADH dehydrogenase (Ubiquinone) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTF5_ECTSI) HSP 1 Score: 86.3 bits (212), Expect = 9.210e-20 Identity = 49/84 (58.33%), Postives = 60/84 (71.43%), Query Frame = 1
Query: 31 RKTATGLTGLAVDPNARANLIKVQQQVLEKIKIIPAGVAYRDAVEKTFSYRLKVAQDAEDEDKIEEEIGMGAPIQLEELIDEAK 282
+KT+TGL GLAVD NARAN I +Q+Q+LEKIK+IP YR VE YRLKVA + EDE+ IE+EI G QLEEL+ + K
Sbjct: 14 KKTSTGLVGLAVDVNARANFIALQKQILEKIKVIPDHAQYRKDVEAISGYRLKVATETEDEETIEDEINHG---QLEELLVDGK 94
BLAST of mRNA_P-wetherbeei_contig5675.1.1 vs. uniprot
Match: A0A7S2BEJ1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BEJ1_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 1.240e-19 Identity = 49/83 (59.04%), Postives = 60/83 (72.29%), Query Frame = 1
Query: 34 KTATGLTGLAVDPNARANLIKVQQQVLEKIKIIPAGVAYRDAVEKTFSYRLKVAQDAEDEDKIEEEIGMGAPIQLEELIDEAK 282
KT+TGL GL VD N RANLI +QQQ+LE +K IP AYR +VE T +YRLKVA + DE+ IE+ IG G QLEELI++ K
Sbjct: 20 KTSTGLVGLKVDLNGRANLIAMQQQLLEAVKAIPETAAYRQSVEATATYRLKVATEETDEEAIEKTIGFG---QLEELIEQGK 99
BLAST of mRNA_P-wetherbeei_contig5675.1.1 vs. uniprot
Match: A0A024GNY3_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GNY3_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 3.010e-19 Identity = 47/86 (54.65%), Postives = 65/86 (75.58%), Query Frame = 1
Query: 31 RKTATGLTGLAVDPNARANLIKVQQQVLEKIKI--IPAGVAYRDAVEKTFSYRLKVAQDAEDEDKIEEEIGMGAPIQLEELIDEAK 282
RKT+TGL GLAV+PNAR +L+ + Q+ LE++KI +P AYRDAVE+ +RLK+ +D E+ED IE+EI G QLEELI++A+
Sbjct: 12 RKTSTGLVGLAVNPNARQDLVHLYQRTLEEVKIQVLPEDAAYRDAVERITKFRLKIVEDNENEDVIEKEINCG---QLEELIEQAE 94
BLAST of mRNA_P-wetherbeei_contig5675.1.1 vs. uniprot
Match: F0WM77_9STRA (Uncharacterized protein AlNc14C153G7580 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WM77_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 1.720e-18 Identity = 49/97 (50.52%), Postives = 71/97 (73.20%), Query Frame = 1
Query: 1 MFAARVLLRA-RKTATGLTGLAVDPNARANLIKVQQQVLEKIK--IIPAGVAYRDAVEKTFSYRLKVAQDAEDEDKIEEEIGMGAPIQLEELIDEAK 282
M+ R L A RKT+TGL GLAV+PNAR +L+++ ++ LE++K ++P AYRDAVE+ +RLKV ++ EDE+ IE+EI G QLEELI++A+
Sbjct: 1 MWVTRALCAAVRKTSTGLVGLAVNPNARKDLMQLYRKTLEEVKNQVLPEDAAYRDAVERITKFRLKVVEENEDEEVIEKEINCG---QLEELIEQAE 94
BLAST of mRNA_P-wetherbeei_contig5675.1.1 vs. uniprot
Match: A0A835Z296_9STRA (NADH dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z296_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.030e-16 Identity = 45/83 (54.22%), Postives = 56/83 (67.47%), Query Frame = 1
Query: 31 RKTATGLTGLAVDPNARANLIKVQQQVLEKIKIIPAGVAYRDAVEKTFSYRLKVAQDAEDEDKIEEEIGMGAPIQLEELIDEA 279
+KT+TGL GL VDPNAR NL + Q +LEKIKIIP YR AVE YRLKV + ++++E+EI G QLEELI +A
Sbjct: 23 KKTSTGLVGLPVDPNARVNLAQKQNDILEKIKIIPEHTGYRKAVEAISKYRLKVLDSSLTDEQVEDEINCG---QLEELIVQA 102
BLAST of mRNA_P-wetherbeei_contig5675.1.1 vs. uniprot
Match: A0A261XUS0_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XUS0_9FUNG) HSP 1 Score: 71.6 bits (174), Expect = 3.090e-14 Identity = 41/94 (43.62%), Postives = 59/94 (62.77%), Query Frame = 1
Query: 1 MFAARVLLRARKTATGLTGLAVDPNARANLIKVQQQVLEKIKIIPAGVAYRDAVEKTFSYRLKVAQDAEDEDKIEEEIGMGAPIQLEELIDEAK 282
M R+L ARKT TGLTG+AV + R LIKV Q L ++ +PA YR A E +RL++ + +D ++IE++IG G Q+EELI +A+
Sbjct: 1 MLPTRLLFAARKTTTGLTGIAVHNSPRPTLIKVYNQTLSRLSALPASAVYRQAAEALTKHRLEIVESTKDVNEIEKKIGAG---QVEELIWQAE 91
BLAST of mRNA_P-wetherbeei_contig5675.1.1 vs. uniprot
Match: A0A072UKP4_MEDTR (NADH-ubiquinone oxidoreductase, putative n=2 Tax=Medicago truncatula TaxID=3880 RepID=A0A072UKP4_MEDTR) HSP 1 Score: 73.6 bits (179), Expect = 1.220e-13 Identity = 45/91 (49.45%), Postives = 58/91 (63.74%), Query Frame = 1
Query: 10 ARVLLRARKTATGLTGLAVDPNARANLIKVQQQVLEKIKIIPAGVAYRDAVEKTFSYRLKVAQDAEDEDKIEEEIGMGAPIQLEELIDEAK 282
AR L+ KT TG+ GL V PNAR LI + + L +IK +P YR AVE S+RLKV Q+ ED +KIE +G G Q+EELI+EA+
Sbjct: 93 ARPLMARLKTTTGIVGLDVVPNAREVLINLYSKTLNEIKKVPEDEGYRKAVESFTSHRLKVCQEEEDWEKIENRLGCG---QVEELIEEAQ 180
BLAST of mRNA_P-wetherbeei_contig5675.1.1 vs. uniprot
Match: A0A1Y1I1B4_KLENI (NADH-ubiquinone oxidoreductase 1 alpha subcomplex subunit 5 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I1B4_KLENI) HSP 1 Score: 68.2 bits (165), Expect = 1.510e-12 Identity = 43/88 (48.86%), Postives = 58/88 (65.91%), Query Frame = 1
Query: 19 LLRARKTATGLTGLAVDPNARANLIKVQQQVLEKIKI-IPAGVAYRDAVEKTFSYRLKVAQDAEDEDKIEEEIGMGAPIQLEELIDEA 279
LL A K +TG+ GL V PNAR LI + Q L+ +K IP YR +VE+ +YRLKV Q+ E+ D+IE+ IG G Q+EELI++A
Sbjct: 10 LLSAAKESTGIVGLDVVPNAREVLIGLYDQTLKVVKDQIPEQAEYRRSVERITNYRLKVCQEEEEHDRIEQRIGCG---QVEELIEQA 94
BLAST of mRNA_P-wetherbeei_contig5675.1.1 vs. uniprot
Match: A0A835IHB9_9MAGN (Uncharacterized protein n=2 Tax=Coptis chinensis TaxID=261450 RepID=A0A835IHB9_9MAGN) HSP 1 Score: 68.2 bits (165), Expect = 2.910e-12 Identity = 40/88 (45.45%), Postives = 55/88 (62.50%), Query Frame = 1
Query: 19 LLRARKTATGLTGLAVDPNARANLIKVQQQVLEKIKIIPAGVAYRDAVEKTFSYRLKVAQDAEDEDKIEEEIGMGAPIQLEELIDEAK 282
LL K TG+ GL V PNAR LI + + L +IK +P YR AVE +RLKV Q+ ED ++IE ++G G Q+EE+++EAK
Sbjct: 12 LLARVKETTGIVGLDVVPNAREQLISLYSKTLNEIKSVPEDEGYRKAVESFTKHRLKVCQEEEDWEQIENKLGCG---QIEEVLEEAK 96
BLAST of mRNA_P-wetherbeei_contig5675.1.1 vs. uniprot
Match: A0A2K3NDE8_TRIPR (Putative NADH dehydrogenase n=2 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3NDE8_TRIPR) HSP 1 Score: 67.0 bits (162), Expect = 1.090e-11 Identity = 42/91 (46.15%), Postives = 57/91 (62.64%), Query Frame = 1
Query: 10 ARVLLRARKTATGLTGLAVDPNARANLIKVQQQVLEKIKIIPAGVAYRDAVEKTFSYRLKVAQDAEDEDKIEEEIGMGAPIQLEELIDEAK 282
AR L+ K TG+ GL V PNAR LI + + L +I+ +P YR AVE S+RLKV Q+ ED +KIE+ + G Q+EELI+EA+
Sbjct: 7 ARPLMAKIKQTTGIVGLDVVPNAREVLIGLYSKTLNEIQKVPKDEGYRKAVESFTSHRLKVCQEEEDWEKIEDRLACG---QVEELIEEAQ 94 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5675.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5675.1.1 >prot_P-wetherbeei_contig5675.1.1 ID=prot_P-wetherbeei_contig5675.1.1|Name=mRNA_P-wetherbeei_contig5675.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=94bp MFAARVLLRARKTATGLTGLAVDPNARANLIKVQQQVLEKIKIIPAGVAYback to top mRNA from alignment at P-wetherbeei_contig5675:15..885- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5675.1.1 ID=mRNA_P-wetherbeei_contig5675.1.1|Name=mRNA_P-wetherbeei_contig5675.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=871bp|location=Sequence derived from alignment at P-wetherbeei_contig5675:15..885- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5675:15..885- >mRNA_P-wetherbeei_contig5675.1.1 ID=mRNA_P-wetherbeei_contig5675.1.1|Name=mRNA_P-wetherbeei_contig5675.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=282bp|location=Sequence derived from alignment at P-wetherbeei_contig5675:15..885- (Phaeothamnion wetherbeei SAG_119_79)back to top |