mRNA_P-wetherbeei_contig5610.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5610.1.1 vs. uniprot
Match: Q8QNL6_ESV1K (EsV-1-50 n=3 Tax=root TaxID=1 RepID=Q8QNL6_ESV1K) HSP 1 Score: 161 bits (407), Expect = 4.570e-42 Identity = 94/256 (36.72%), Postives = 137/256 (53.52%), Query Frame = 1
Query: 25 IANLEPSTDYEVLVECILGDSWVSHDSMMFVTESEHSPHFERLYESIKRPDGSYDATVLDEASHDRFLKHFRDFVQTGDILETPIKLHGAKRTVTATAVAESGSFDVKDSQHVILPFSPQSGSGKVFLSRN---------------------GNSRTVKYSDSTNSITVEGKTYSIGDRFQMLGRTVTVADGSIVLVFSDSVVGSYPHSAATASAVTSTYGSNFVRDFTANAGYMMATKDEGSAASSNISGMIYDT 729
+ NLEP T Y+V V ++ +S + F T S PH E LY S++ DG+YDAT D++ HD FLK+F D VQ GD + + L GA + + AV E + DV Q++ LPFS SGS +V N G + Y+ +++ T+ Y +GD+F + G+ VTVADGSIVLVF D+V YP + +TAS V T GS F +++T N ++ +K G++ + S +YDT
Sbjct: 48 LVNLEPDTSYDVRVTSASSNTVLSDE---FQTWSLEDPHLENLYASVRLEDGTYDATQFDKSVHDVFLKYFNDIVQNGDTIYASVILKGAPKNIETRAVTEGSTTDVVGDQNLFLPFSRDSGSAQVVTLSNSIPIDDVEATAVSDVAVAQDLGGDVELLYTPESDTFTIGNNVYGVGDKFNLFGKMVTVADGSIVLVFEDTVAKVYPFNTSTASNVIGTLGSQFAKNYTCNVINVVGSKTTGASGDTYSSSWVYDT 300
BLAST of mRNA_P-wetherbeei_contig5610.1.1 vs. uniprot
Match: B5LWF4_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWF4_9PHYC) HSP 1 Score: 139 bits (351), Expect = 5.460e-34 Identity = 93/266 (34.96%), Postives = 141/266 (53.01%), Query Frame = 1
Query: 7 EDLQAVIANLEPSTDYEVLVECILGDSWVSHDSMMFVTESEHSPHFERLYESIKRPDGSYDATVLDEASHDRFLKHFRDFVQTGDILETPIKLHGAKRTV-TATAVAESGSFDVKDSQHVILPFSPQSGSGKV--FLSRNGNSR--TVKYSDSTNSITVEGKTYSIGDRFQMLGRTVTVADGSIVLVFSDSVVGSYPHSAATASAVTSTYGSNFVRDFTANAGYMMATKDEGSAASSNISGMIYDTHPH*HGEGDFSYCSISRRRH 789
++ V+ NLEP T Y V V S + S F T+S +P LY SI+ P+G +D T D HD F+++F V GD + + ++GA + V T A E SFDV ++ LPF ++G V R+ S T+ Y ST+++ G Y +GD+F++ RTVTVADGSIVL+FSD+V ++P A+ A +V + GS+F+++ T N ++ K +G S+ S I++T D S +SR H
Sbjct: 61 DEAAVVVVNLEPGTTYAVSVRSAETKSPDLYGS--FTTKSSENPELSALYSSIRTPEGIFDTTRFDTKLHDIFVENFSSIVSPGDRILAKVVVNGAPQEVMTVAASGEGSSFDVDAESNIFLPFHRKTGEALVQTVTLRHPTSADATLVYDSSTDNLAYGGDHYGVGDKFELFNRTVTVADGSIVLLFSDTVAKTWPFDASKALSVVGSAGSHFMKNITCNTHNLVGQKIDGETGSTYNSAWIHNT-------DDSSTLEVSRMVH 317
BLAST of mRNA_P-wetherbeei_contig5610.1.1 vs. uniprot
Match: Q6XLT5_9PHYC (FirrV-1-N1 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLT5_9PHYC) HSP 1 Score: 136 bits (343), Expect = 5.840e-33 Identity = 95/271 (35.06%), Postives = 137/271 (50.55%), Query Frame = 1
Query: 1 VTEDLQAVIANLEPSTDYEVLVECILGDSWVSHDSMMFVTESEHSPHFERLYESIKRPDGSYDATVLDEASHDRFLKHFRDFVQTGDILETPIKLHGAKRTVTATAVAESGSFDVK-DSQ-HVILPFSPQSGSGK------VFLSRNGNSRTVKYSDSTNSITVEGKTYSIGDRFQMLGRTVTVADGSIVLVFSDSVVGSYPHSAATASAVTSTYGSNFVRDFTANAGYMMATKDEGSAASSNISGMIYDTHPH*HGEGDFSYCSISRRRH 789
V + V+ NL PST Y V V+ S + + FVT S +P LY SI+ DG YD T ++ HD FL++F V GD + + ++G + V A E +V D+Q +V LPF + V L G T+ Y TNS+ G YS GD+FQ+ RTVTVADGSIVL+F+D+V S+P A A +V + GS+F+++ T N ++ K +G+ S+ S I++T D S +SR H
Sbjct: 41 VDREAAVVVVNLSPSTTYHVTVKSARDTS--ADLNGQFVTMSAANPCLHNLYSSIRTTDGIYDTTRFEKELHDVFLENFSGVVSPGDRILAKVDVNGLSQHVLTVAATEGSDLEVDVDAQANVFLPFCSKHKDKDTEDIQTVVLKTTGEDATLVYDGHTNSVAYGGDAYSTGDKFQLFNRTVTVADGSIVLLFADTVAKSWPFDATKALSVVGSAGSHFMKNITCNVHNLVGQKTDGTTGSTYNSAWIHNT-------DDSSTLEVSRMVH 302
BLAST of mRNA_P-wetherbeei_contig5610.1.1 vs. uniprot
Match: Q6XLY0_9PHYC (FirrV-1-B56 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLY0_9PHYC) HSP 1 Score: 134 bits (337), Expect = 4.090e-32 Identity = 89/247 (36.03%), Postives = 128/247 (51.82%), Query Frame = 1
Query: 1 VTEDLQAVIANLEPSTDYEVLVECILGDSWVSHDSMMFVTESEHSPHFERLYESIKRPDGSYDATVLDEASHDRFLKHFRDFVQTGDILETPIKLHGAKRTVTATAVAESGSF--DVKDSQHVILPFSPQSGSGKV----FLSRNGNS-RTVKYSDSTNSITVEGKTYSIGDRFQMLGRTVTVADGSIVLVFSDSVVGSYPHSAATASAVTSTYGSNFVRDFTANAGYMMATKDEGSAASSNISGMI 720
V + VI NL T Y V +E +S + FVT + P LY SI+RPDG YD T ++ HD FL+HF V GD + ++++G + V A A E D +V LPF P S V ++N S T+ Y T+ + G YS+GD+FQM +TVTVADGSIVL+FSD+V ++P A+ A AV + GS+F+++ T N ++ K G + S+ S +
Sbjct: 41 VEHEAAIVIVNLHADTTYHVSLESTAPES--QRLTGHFVTCPKDQPCLANLYASIRRPDGVYDTTSFEKELHDVFLQHFSTIVSPGDRIFAKVEVNGVSQNVMAIAATEGVELEIDAAPDTNVFLPFFPGDNSEAVQTVTLKNKNHESLETLVYDAHTDKLAYGGDAYSVGDKFQMFNKTVTVADGSIVLLFSDTVAKTWPFDASKALAVVGSAGSHFMKNITCNVQNLVGQKTTGESGSTYSSAWV 285 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5610.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5610.1.1 >prot_P-wetherbeei_contig5610.1.1 ID=prot_P-wetherbeei_contig5610.1.1|Name=mRNA_P-wetherbeei_contig5610.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=212bp MMFVTESEHSPHFERLYESIKRPDGSYDATVLDEASHDRFLKHFRDFVQTback to top mRNA from alignment at P-wetherbeei_contig5610:591..1680- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5610.1.1 ID=mRNA_P-wetherbeei_contig5610.1.1|Name=mRNA_P-wetherbeei_contig5610.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1090bp|location=Sequence derived from alignment at P-wetherbeei_contig5610:591..1680- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5610:591..1680- >mRNA_P-wetherbeei_contig5610.1.1 ID=mRNA_P-wetherbeei_contig5610.1.1|Name=mRNA_P-wetherbeei_contig5610.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=636bp|location=Sequence derived from alignment at P-wetherbeei_contig5610:591..1680- (Phaeothamnion wetherbeei SAG_119_79)back to top |