mRNA_P-wetherbeei_contig56018.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig56018.1.1 vs. uniprot
Match: A0A6J4VRG1_9CHLR (Uncharacterized protein n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4VRG1_9CHLR) HSP 1 Score: 66.6 bits (161), Expect = 2.720e-11 Identity = 56/126 (44.44%), Postives = 71/126 (56.35%), Query Frame = 1
Query: 1 RRSRLDREVDEILNSATRENPLP-PTPIASRRRPS-TGPS-TGDRARSVLATTVDTLMTVPLLTAVGFGIACAVVSPYSPLLATLFAVLALVVLVAPYVQAARRASTPGGGP--KMWRGRVMDDPP 363
R+SRLD EV+EIL + P P P ++ PS TGP T V+ +DT PLL A+GF I +VS SPLLATLFA+ A+V ++ P +Q RR P P KMWRGR +D P
Sbjct: 17 RKSRLDLEVEEILRKSDNVRPFPNPRSRPAKATPSRTGPGPTPASIPPVVRKALDT----PLLLALGFAILALMVSSASPLLATLFALAAVVFVLFPVIQRYRR---PSAAPETKMWRGREIDSRP 135
BLAST of mRNA_P-wetherbeei_contig56018.1.1 vs. uniprot
Match: A0A7W0ABP1_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0ABP1_9CHLR) HSP 1 Score: 65.5 bits (158), Expect = 7.400e-11 Identity = 45/121 (37.19%), Postives = 67/121 (55.37%), Query Frame = 1
Query: 4 RSRLDREVDEILNSATRENPLPPTPIASRRRPSTGPSTGDRARSVLATTV----DTLMTVPLLTAVGFGIACAVVSPYSPLLATLFAVLALVVLVAPYVQAARRASTPGGGPKMWRGRVMD 354
+SRLDRE+DEIL+ LPP P R R + R+ + TT+ L+T P++ A+ + ++S SPL A+LF + A++ +V P Q RR STP +MWRG+V+D
Sbjct: 16 KSRLDRELDEILSKDENIRLLPPPPKPIRPR-----TKAPRSAPTMGTTIPPQFQKLLTAPIVIALALAVLALLISDLSPLFASLFCLAAVICIVHPIFQQMRRKSTPPDT-RMWRGQVVD 130
BLAST of mRNA_P-wetherbeei_contig56018.1.1 vs. uniprot
Match: A0A7W0KGR4_9CHLR (Uncharacterized protein (Fragment) n=2 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0KGR4_9CHLR) HSP 1 Score: 61.2 bits (147), Expect = 2.880e-9 Identity = 46/126 (36.51%), Postives = 65/126 (51.59%), Query Frame = 1
Query: 4 RSRLDREVDEILNSATRENPLPPTPIASRRRPSTGPS---TGDRARSVLATTVDTLMTVPLLTAVGFGIACAVVSPYSPLLATLFAVLALVVLVAPYVQAARRASTPGGGPKMWRGRVMDDPPRRP 372
+SRLDRE++EIL LPP P A + P P G S++ L+ P++ A+G I +VS S LLATL ++ A+ +V P Q RR + +MWRG+V+D P RP
Sbjct: 16 KSRLDRELEEILARNENIRLLPPPPQAPKT-PRAKPMPVRAGSSFESMIPPRARQLLAAPIVMALGLAIVALLVSDISALLATLISLAAVACIVVPMAQRFRRGPSAPPDIRMWRGQVVDAMPPRP 140
BLAST of mRNA_P-wetherbeei_contig56018.1.1 vs. uniprot
Match: A0A7W0PNG0_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0PNG0_9CHLR) HSP 1 Score: 60.8 bits (146), Expect = 4.720e-9 Identity = 46/123 (37.40%), Postives = 67/123 (54.47%), Query Frame = 1
Query: 4 RSRLDREVDEILNSATRENPLPPTPIASRRRPSTGPSTGDRARSV---LATTVDTLMTVPLLTAVGFGIACAVVSPYSPLLATLFAVLALVVLVAPYVQAARRASTPGGGPKMWRGRVMDDPP 363
+SRLDRE+DEIL+ LPP P AS+ P P+ A S+ + L+ P++ A+G I +VS S LLAT+ ++ A+V +V P VQ RR + +MWRG+V+ P
Sbjct: 16 KSRLDRELDEILSKNENIRLLPPPPQASKP-PGPKPAPRQSASSIESMIPPKARELLASPVVLALGLAIVALLVSDLSALLATMLSLAAVVCVVMPMVQRFRRRPSAPPDIRMWRGQVIGSQP 137
BLAST of mRNA_P-wetherbeei_contig56018.1.1 vs. uniprot
Match: A0A7V9VHZ7_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9VHZ7_9CHLR) HSP 1 Score: 50.8 bits (120), Expect = 2.660e-5 Identity = 45/125 (36.00%), Postives = 66/125 (52.80%), Query Frame = 1
Query: 10 RLDREVDEILNSATRENPLP------PTPIASRR-RPSTGPSTGDRARSVLATTVDTLMTVPLLTAVGFGIACAVVSPYSPLLATLFAVLALVVLVAPYVQAARRASTPGGGPKMWRGRVMDDPP 363
RL REVDEIL A R P+ IA+R+ R + P + + + M +P+LTA+ F I A ++P+ LLATLFA+ A+V++ P+ A R+ T WRGRV+ + P
Sbjct: 13 RLQREVDEILEKA-RARPISFQQKVDQKRIAARQQRQQSSPD----VQLLKGNAIRLAMKIPILTAIVFAIIAAYLAPHLSLLATLFALAAVVMVFIPF--AVRQPETSPADQARWRGRVVSNLP 130 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56018.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig56018.1.1 >prot_P-wetherbeei_contig56018.1.1 ID=prot_P-wetherbeei_contig56018.1.1|Name=mRNA_P-wetherbeei_contig56018.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=129bp RRSRLDREVDEILNSATRENPLPPTPIASRRRPSTGPSTGDRARSVLATTback to top mRNA from alignment at P-wetherbeei_contig56018:70..456- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig56018.1.1 ID=mRNA_P-wetherbeei_contig56018.1.1|Name=mRNA_P-wetherbeei_contig56018.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=387bp|location=Sequence derived from alignment at P-wetherbeei_contig56018:70..456- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig56018:70..456- >mRNA_P-wetherbeei_contig56018.1.1 ID=mRNA_P-wetherbeei_contig56018.1.1|Name=mRNA_P-wetherbeei_contig56018.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=387bp|location=Sequence derived from alignment at P-wetherbeei_contig56018:70..456- (Phaeothamnion wetherbeei SAG_119_79)back to top |