prot_P-wetherbeei_contig10198.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig10198.1.1
Unique Nameprot_P-wetherbeei_contig10198.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length120
Homology
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BLAST of mRNA_P-wetherbeei_contig10198.1.1 vs. uniprot
Match: A0A7X9KGC6_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X9KGC6_9ACTN)

HSP 1 Score: 234 bits (597), Expect = 8.410e-78
Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 0 
Query:    1 MTNDTPTLQLAVWDDPLAANGLQTDTDDALIYLPPFLGPTSSLVLHRLSRCLTTGTGRVWSIEDLAATFGVGASQMRASLARLERFGMIRTVGGRTEVRTRVPALAARHVERMPAYLAA 119
            MTNDTPTLQLAVWDDPLAANGLQTDTDDALIYLPPFLGPTSSLVLHRLSRCLTTGTGRVWSIEDLAATFGVGASQMRASLARLERFGMIRTVGGRTEVRTRVPALAARH+ERMPAYLAA
Sbjct:    1 MTNDTPTLQLAVWDDPLAANGLQTDTDDALIYLPPFLGPTSSLVLHRLSRCLTTGTGRVWSIEDLAATFGVGASQMRASLARLERFGMIRTVGGRTEVRTRVPALAARHIERMPAYLAA 119
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BLAST of mRNA_P-wetherbeei_contig10198.1.1 vs. uniprot
Match: A0A6I3MRQ0_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3MRQ0_9ACTN)

HSP 1 Score: 50.8 bits (120), Expect = 1.870e-5
Identity = 40/122 (32.79%), Postives = 61/122 (50.00%), Query Frame = 0 
Query:    3 NDTPTLQLAVWDDPLA-ANGLQTDTDDALIYLPPFLGPTSSLVLHRL-SRCLTTGTGRVWSIEDLAATFGVG-----ASQMRASLARLERFGMIRTVGGRTEVRTRVPALAARHVERMPAYL 117
            +D+ TL +  W DP+  + G +  +D    Y    LGPTS+ +L RL S       G   ++ + AA  G+             + RL  FG+ +       VRTR+PAL+ARHV+R+P +L
Sbjct:    9 HDSETLVVYPWLDPVVDSTGFEVRSDYVEHYWLGILGPTSTWLLRRLVSGFDHYPDGYELNLPETAAALGLNYRTDKECPFTRGIDRLVMFGVAQKYSYGLAVRTRIPALSARHVQRLPQHL 130
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10198.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7X9KGC6_9ACTN8.410e-7899.16Uncharacterized protein n=1 Tax=Actinomycetia bact... [more]
A0A6I3MRQ0_9ACTN1.870e-532.79Uncharacterized protein n=2 Tax=root TaxID=1 RepID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 38..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10198contigP-wetherbeei_contig10198:113..472 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10198.1.1mRNA_P-wetherbeei_contig10198.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig10198 113..472 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig10198.1.1 ID=prot_P-wetherbeei_contig10198.1.1|Name=mRNA_P-wetherbeei_contig10198.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=120bp
MTNDTPTLQLAVWDDPLAANGLQTDTDDALIYLPPFLGPTSSLVLHRLSR
CLTTGTGRVWSIEDLAATFGVGASQMRASLARLERFGMIRTVGGRTEVRT
RVPALAARHVERMPAYLAAI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036390WH_DNA-bd_sf