prot_P-wetherbeei_contig55998.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig55998.1.1
Unique Nameprot_P-wetherbeei_contig55998.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length114
Homology
BLAST of mRNA_P-wetherbeei_contig55998.1.1 vs. uniprot
Match: A0A7C4TP59_9HYPH (MarR family transcriptional regulator n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TP59_9HYPH)

HSP 1 Score: 172 bits (436), Expect = 5.220e-53
Identity = 86/114 (75.44%), Postives = 105/114 (92.11%), Query Frame = 0
Query:    1 MADAGLTPRQFAVLVTVSQNEGLSQTNLVDRTGIDRSTLADIIRRMIKKGLIQRRRTKEDARAYAVRLTEEGNRVLRASDPLARKVDDKVLSVLSSAERERFLQDLGKIVRMLG 114
            MAD GLTPRQ+AVL TVS NEGLSQTNLV++TGIDRSTLADIIRRM++KGL+ RRRTKEDARAY+V+LT+EG RVL++++PLAR+VDDK+L+ L + +RERFLQDLGKIVR +G
Sbjct:   33 MADGGLTPRQYAVLYTVSHNEGLSQTNLVEKTGIDRSTLADIIRRMLRKGLLARRRTKEDARAYSVKLTDEGWRVLKSAEPLARRVDDKILAALPTQDRERFLQDLGKIVRNIG 146          
BLAST of mRNA_P-wetherbeei_contig55998.1.1 vs. uniprot
Match: A0A101VID2_9PROT (MarR family transcriptional regulator n=1 Tax=Alphaproteobacteria bacterium BRH_c36 TaxID=1734406 RepID=A0A101VID2_9PROT)

HSP 1 Score: 163 bits (412), Expect = 2.910e-49
Identity = 82/114 (71.93%), Postives = 98/114 (85.96%), Query Frame = 0
Query:    1 MADAGLTPRQFAVLVTVSQNEGLSQTNLVDRTGIDRSTLADIIRRMIKKGLIQRRRTKEDARAYAVRLTEEGNRVLRASDPLARKVDDKVLSVLSSAERERFLQDLGKIVRMLG 114
            M    LTPRQ+AVLV V++NEGLSQTNLVD TGIDRSTLADIIRRM+KKGL+QRRRTKEDARAYAV+LTE+G R+L A++P+A+KVD+++L  L +AERERFL DL  IV  LG
Sbjct:   33 MRTEDLTPRQYAVLVAVAENEGLSQTNLVDMTGIDRSTLADIIRRMLKKGLVQRRRTKEDARAYAVKLTEDGRRILEAAEPMAKKVDERILQALPAAERERFLSDLSMIVEALG 146          
BLAST of mRNA_P-wetherbeei_contig55998.1.1 vs. uniprot
Match: A0A6I3KKW2_9HYPH (MarR family transcriptional regulator n=4 Tax=Hyphomicrobium TaxID=81 RepID=A0A6I3KKW2_9HYPH)

HSP 1 Score: 161 bits (408), Expect = 1.010e-48
Identity = 81/114 (71.05%), Postives = 101/114 (88.60%), Query Frame = 0
Query:    1 MADAGLTPRQFAVLVTVSQNEGLSQTNLVDRTGIDRSTLADIIRRMIKKGLIQRRRTKEDARAYAVRLTEEGNRVLRASDPLARKVDDKVLSVLSSAERERFLQDLGKIVRMLG 114
            M    LTPRQ+AVLV VS NEG+SQT LV++TG+DRSTLADI+RRM+KKGL+QRRRTKEDARAY+V+LT+EG +VL+A+DPLAR+VDD++L VL  A+RERFLQDL +IV+ LG
Sbjct:   37 MVAGDLTPRQYAVLVAVSLNEGVSQTLLVEKTGVDRSTLADIVRRMLKKGLLQRRRTKEDARAYSVKLTDEGWKVLKAADPLARRVDDRILGVLPGAQRERFLQDLNQIVKALG 150          
BLAST of mRNA_P-wetherbeei_contig55998.1.1 vs. uniprot
Match: A0A2W4TJ55_9PROT (MarR family transcriptional regulator n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4TJ55_9PROT)

HSP 1 Score: 161 bits (407), Expect = 1.480e-48
Identity = 82/109 (75.23%), Postives = 100/109 (91.74%), Query Frame = 0
Query:    3 DAGLTPRQFAVLVTVSQNEGLSQTNLVDRTGIDRSTLADIIRRMIKKGLIQRRRTKEDARAYAVRLTEEGNRVLRASDPLARKVDDKVLSVLSSAERERFLQDLGKIVR 111
            D  LTPRQ+A+L+TV+QNEGLSQT+LV+RTGIDRSTLAD+IRRMIKKGL+QRRRT+EDARAYAV+LTEEG RVLR ++PLAR+ D+KVLSVLS  +RERFL+ L +I+R
Sbjct:   41 DGELTPRQYAILLTVAQNEGLSQTDLVERTGIDRSTLADVIRRMIKKGLLQRRRTREDARAYAVKLTEEGWRVLRQTEPLARRADEKVLSVLSVVDRERFLKGLREIIR 149          
BLAST of mRNA_P-wetherbeei_contig55998.1.1 vs. uniprot
Match: A0A2S5PBX5_HYPSQ (MarR family transcriptional regulator n=2 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5PBX5_HYPSQ)

HSP 1 Score: 161 bits (407), Expect = 1.670e-48
Identity = 81/113 (71.68%), Postives = 101/113 (89.38%), Query Frame = 0
Query:    1 MADAGLTPRQFAVLVTVSQNEGLSQTNLVDRTGIDRSTLADIIRRMIKKGLIQRRRTKEDARAYAVRLTEEGNRVLRASDPLARKVDDKVLSVLSSAERERFLQDLGKIVRML 113
            M  + LTPRQFAVLVTVSQNEGLSQTNLV++TGIDRSTLADI+RRM+KKGL+QRRRTKEDARAY+V+L++EG R L++++P+AR+VDDKVL+VLS  +R+RF+ DL  IV  L
Sbjct:   38 MGASDLTPRQFAVLVTVSQNEGLSQTNLVEKTGIDRSTLADIVRRMLKKGLLQRRRTKEDARAYSVKLSDEGWRTLKSAEPMARRVDDKVLAVLSGPQRDRFVNDLNTIVEAL 150          
BLAST of mRNA_P-wetherbeei_contig55998.1.1 vs. uniprot
Match: A0A2S5MAT9_HYPSQ (MarR family transcriptional regulator n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5MAT9_HYPSQ)

HSP 1 Score: 159 bits (403), Expect = 5.140e-48
Identity = 81/114 (71.05%), Postives = 100/114 (87.72%), Query Frame = 0
Query:    1 MADAGLTPRQFAVLVTVSQNEGLSQTNLVDRTGIDRSTLADIIRRMIKKGLIQRRRTKEDARAYAVRLTEEGNRVLRASDPLARKVDDKVLSVLSSAERERFLQDLGKIVRMLG 114
            MA   LTPRQFAVLVTVSQNEGLSQTNLV++TGIDRSTLAD++RRM+KKGLI+RRRT+ DARAY+V+LT+EG+R+L+ +DPLA +VDD++LS L  A RERF+QDL  IV  +G
Sbjct:   33 MATDSLTPRQFAVLVTVSQNEGLSQTNLVEQTGIDRSTLADVVRRMLKKGLIKRRRTRHDARAYSVKLTDEGSRMLKIADPLADRVDDRILSSLPVARRERFMQDLRAIVHGMG 146          
BLAST of mRNA_P-wetherbeei_contig55998.1.1 vs. uniprot
Match: A0A849TQV1_9HYPH (MarR family transcriptional regulator n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A849TQV1_9HYPH)

HSP 1 Score: 158 bits (399), Expect = 2.090e-47
Identity = 79/111 (71.17%), Postives = 96/111 (86.49%), Query Frame = 0
Query:    3 DAGLTPRQFAVLVTVSQNEGLSQTNLVDRTGIDRSTLADIIRRMIKKGLIQRRRTKEDARAYAVRLTEEGNRVLRASDPLARKVDDKVLSVLSSAERERFLQDLGKIVRML 113
            D  LTPRQ+AVL TV+QNEGLSQT LVDRTGIDRSTLADI+RRM+KKGL+QRRRTKEDARAYAV+LTEEG R+LR ++P+AR+VD+++L  L + +RE+FL DL  IV  L
Sbjct:   35 DGDLTPRQYAVLATVAQNEGLSQTGLVDRTGIDRSTLADIVRRMLKKGLLQRRRTKEDARAYAVKLTEEGKRMLRTAEPIARRVDERILEGLQAKQREQFLDDLSTIVTTL 145          
BLAST of mRNA_P-wetherbeei_contig55998.1.1 vs. uniprot
Match: A0A258L578_9HYPH (MarR family transcriptional regulator n=2 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=A0A258L578_9HYPH)

HSP 1 Score: 158 bits (399), Expect = 2.510e-47
Identity = 79/109 (72.48%), Postives = 98/109 (89.91%), Query Frame = 0
Query:    6 LTPRQFAVLVTVSQNEGLSQTNLVDRTGIDRSTLADIIRRMIKKGLIQRRRTKEDARAYAVRLTEEGNRVLRASDPLARKVDDKVLSVLSSAERERFLQDLGKIVRMLG 114
            LTPRQ+AVL+TVSQNEGLSQT LV++TGIDRSTLADI+RRM+KKGL+ RRRT+EDARAYAVRLT++G + LR +DP+AR+VD+++LS L +A+RERFL DLG IV  LG
Sbjct:   46 LTPRQYAVLLTVSQNEGLSQTQLVEKTGIDRSTLADIVRRMLKKGLLSRRRTREDARAYAVRLTDDGWKSLRTADPVARRVDERILSALPAAQRERFLTDLGTIVTALG 154          
BLAST of mRNA_P-wetherbeei_contig55998.1.1 vs. uniprot
Match: A0A2W4LBZ2_9PROT (MarR family transcriptional regulator n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4LBZ2_9PROT)

HSP 1 Score: 156 bits (395), Expect = 8.460e-47
Identity = 78/108 (72.22%), Postives = 100/108 (92.59%), Query Frame = 0
Query:    6 LTPRQFAVLVTVSQNEGLSQTNLVDRTGIDRSTLADIIRRMIKKGLIQRRRTKEDARAYAVRLTEEGNRVLRASDPLARKVDDKVLSVLSSAERERFLQDLGKIVRML 113
            LTPRQFA+LV V+QNEGLSQT+LV++TGIDRSTLAD++RRM+KKGL+QRRRT+EDARAYAV+LTEEG R L+ ++PLAR+ D+K+LS+LS++ERERFL+ L +IVR L
Sbjct:   37 LTPRQFAILVAVAQNEGLSQTDLVEKTGIDRSTLADVVRRMLKKGLLQRRRTREDARAYAVKLTEEGWRTLKRAEPLARRADEKLLSLLSASERERFLKGLMEIVRSL 144          
BLAST of mRNA_P-wetherbeei_contig55998.1.1 vs. uniprot
Match: D8JXD2_HYPDA (Transcriptional regulator, MarR family n=4 Tax=Hyphomicrobium TaxID=81 RepID=D8JXD2_HYPDA)

HSP 1 Score: 155 bits (393), Expect = 1.700e-46
Identity = 76/109 (69.72%), Postives = 99/109 (90.83%), Query Frame = 0
Query:    5 GLTPRQFAVLVTVSQNEGLSQTNLVDRTGIDRSTLADIIRRMIKKGLIQRRRTKEDARAYAVRLTEEGNRVLRASDPLARKVDDKVLSVLSSAERERFLQDLGKIVRML 113
            GLTPRQ+AVL+TV+QNEGL+QT LV+ TGIDRSTLADIIRRM+KKG++QRRRT+ DARAY+V++TE+G R+L+A DPLAR+VD+++L+ L+ A+RERFLQDL  IV+ L
Sbjct:   37 GLTPRQYAVLLTVAQNEGLNQTQLVELTGIDRSTLADIIRRMLKKGMLQRRRTRNDARAYSVKITEQGTRILKAHDPLARRVDERILASLAVAQRERFLQDLNAIVQTL 145          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig55998.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4TP59_9HYPH5.220e-5375.44MarR family transcriptional regulator n=1 Tax=Hyph... [more]
A0A101VID2_9PROT2.910e-4971.93MarR family transcriptional regulator n=1 Tax=Alph... [more]
A0A6I3KKW2_9HYPH1.010e-4871.05MarR family transcriptional regulator n=4 Tax=Hyph... [more]
A0A2W4TJ55_9PROT1.480e-4875.23MarR family transcriptional regulator n=1 Tax=Prot... [more]
A0A2S5PBX5_HYPSQ1.670e-4871.68MarR family transcriptional regulator n=2 Tax=Hyph... [more]
A0A2S5MAT9_HYPSQ5.140e-4871.05MarR family transcriptional regulator n=1 Tax=Hyph... [more]
A0A849TQV1_9HYPH2.090e-4771.17MarR family transcriptional regulator n=1 Tax=Hyph... [more]
A0A258L578_9HYPH2.510e-4772.48MarR family transcriptional regulator n=2 Tax=uncl... [more]
A0A2W4LBZ2_9PROT8.460e-4772.22MarR family transcriptional regulator n=1 Tax=Prot... [more]
D8JXD2_HYPDA1.700e-4669.72Transcriptional regulator, MarR family n=4 Tax=Hyp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000835MarR-type HTH domainPRINTSPR00598HTHMARRcoord: 40..55
score: 28.65
coord: 89..109
score: 26.19
coord: 23..39
score: 25.49
coord: 59..75
score: 35.78
IPR000835MarR-type HTH domainSMARTSM00347marrlong4coord: 1..99
e-value: 1.1E-18
score: 78.1
IPR000835MarR-type HTH domainPFAMPF01047MarRcoord: 6..63
e-value: 1.5E-15
score: 56.8
IPR000835MarR-type HTH domainPROSITEPS50995HTH_MARR_2coord: 1..111
score: 31.421064
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..114
e-value: 6.9E-31
score: 108.7
NoneNo IPR availablePANTHERPTHR42756TRANSCRIPTIONAL REGULATOR, MARRcoord: 3..113
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 2..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig55998contigP-wetherbeei_contig55998:44..385 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig55998.1.1mRNA_P-wetherbeei_contig55998.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig55998 44..385 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig55998.1.1 ID=prot_P-wetherbeei_contig55998.1.1|Name=mRNA_P-wetherbeei_contig55998.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=114bp
MADAGLTPRQFAVLVTVSQNEGLSQTNLVDRTGIDRSTLADIIRRMIKKG
LIQRRRTKEDARAYAVRLTEEGNRVLRASDPLARKVDDKVLSVLSSAERE
RFLQDLGKIVRMLG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000835HTH_MarR-typ
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf