prot_P-wetherbeei_contig55515.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig55515.1.1
Unique Name	prot_P-wetherbeei_contig55515.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	156

Homology

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BLAST of mRNA_P-wetherbeei_contig55515.1.1 vs. uniprot
Match: A0A530BK97_9HYPH (Aminomethyl transferase family protein (Fragment) n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A530BK97_9HYPH)

HSP 1 Score: 294 bits (752), Expect = 4.490e-99
Identity = 143/155 (92.26%), Postives = 149/155 (96.13%), Query Frame = 0

Query:    1 MEKSLRLQNADLLTEYNLLEADLQRPKVKEADFRGKAKHLEHRARKHQPAMLCTLVMTENTDAKGVARYPVGIMPVMDPATGETLVDELGRRSFTTSVAYGPTLGKNIALAYLPWSYCQEGRKLIVEYFGETYPVEVAGIGYKPLYDPENLKPRS 155
            MEKSLRLQNADLLTEYNLLEADL RPKVKE DF GKAKHLE+RAR+HQPAMLCTLVMTENTD+KGVARYPVG MPV DPATGETLVDELGRRSFTTSVAYGPT+GKNIALAYLPW+YCQEGRKL VEYFGETYPVEVAG+GYKPLYDPENLKPRS
Sbjct:   95 MEKSLRLQNADLLTEYNLLEADLARPKVKENDFCGKAKHLEYRAREHQPAMLCTLVMTENTDSKGVARYPVGTMPVQDPATGETLVDELGRRSFTTSVAYGPTIGKNIALAYLPWAYCQEGRKLQVEYFGETYPVEVAGVGYKPLYDPENLKPRS 249

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BLAST of mRNA_P-wetherbeei_contig55515.1.1 vs. uniprot
Match: A0A530Y6H8_9HYPH (Aminomethyl transferase family protein (Fragment) n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A530Y6H8_9HYPH)

HSP 1 Score: 285 bits (730), Expect = 2.170e-96
Identity = 137/155 (88.39%), Postives = 146/155 (94.19%), Query Frame = 0

Query:    1 MEKSLRLQNADLLTEYNLLEADLQRPKVKEADFRGKAKHLEHRARKHQPAMLCTLVMTENTDAKGVARYPVGIMPVMDPATGETLVDELGRRSFTTSVAYGPTLGKNIALAYLPWSYCQEGRKLIVEYFGETYPVEVAGIGYKPLYDPENLKPRS 155
            MEKSLRLQNADLLTEYNLLEADL RPKVKEADF GKAKHL++RAR HQPAMLCTLVMT+N D++GVARYPVG MPVMDP TGETLVDELGRRSFTTSVAYGPT+GKNIALAYLPW+YCQEG KL VEYFGETYPVEVA +GY+PLYDPENLKPRS
Sbjct:   50 MEKSLRLQNADLLTEYNLLEADLARPKVKEADFSGKAKHLDYRARAHQPAMLCTLVMTDNVDSRGVARYPVGTMPVMDPQTGETLVDELGRRSFTTSVAYGPTIGKNIALAYLPWAYCQEGHKLDVEYFGETYPVEVAAVGYRPLYDPENLKPRS 204

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BLAST of mRNA_P-wetherbeei_contig55515.1.1 vs. uniprot
Match: A0A530RAX7_9HYPH (Aminomethyl transferase family protein (Fragment) n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A530RAX7_9HYPH)

HSP 1 Score: 286 bits (732), Expect = 5.710e-95
Identity = 137/155 (88.39%), Postives = 146/155 (94.19%), Query Frame = 0

Query:    1 MEKSLRLQNADLLTEYNLLEADLQRPKVKEADFRGKAKHLEHRARKHQPAMLCTLVMTENTDAKGVARYPVGIMPVMDPATGETLVDELGRRSFTTSVAYGPTLGKNIALAYLPWSYCQEGRKLIVEYFGETYPVEVAGIGYKPLYDPENLKPRS 155
            MEKSLRLQNADLLTEYNLLEADL RPKVKEADF GKAKHLE+RAR HQPAMLCTLVMT+N D++GVARYPVG MPVMDP TGETLVDELGRRSFTTS+AYGPT+GKNIALAYLPW+YCQEGRKL VEYFGETYPVEVA +GY+PLYDPENL PRS
Sbjct:  169 MEKSLRLQNADLLTEYNLLEADLARPKVKEADFSGKAKHLEYRARAHQPAMLCTLVMTDNVDSRGVARYPVGTMPVMDPQTGETLVDELGRRSFTTSIAYGPTIGKNIALAYLPWAYCQEGRKLNVEYFGETYPVEVAAVGYRPLYDPENLNPRS 323

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BLAST of mRNA_P-wetherbeei_contig55515.1.1 vs. uniprot
Match: A0A806NEB6_BRUSS (Aminomethyltransferase folate-binding domain protein n=2 Tax=Brucella TaxID=234 RepID=A0A806NEB6_BRUSS)

HSP 1 Score: 285 bits (729), Expect = 2.550e-94
Identity = 137/155 (88.39%), Postives = 146/155 (94.19%), Query Frame = 0

Query:    1 MEKSLRLQNADLLTEYNLLEADLQRPKVKEADFRGKAKHLEHRARKHQPAMLCTLVMTENTDAKGVARYPVGIMPVMDPATGETLVDELGRRSFTTSVAYGPTLGKNIALAYLPWSYCQEGRKLIVEYFGETYPVEVAGIGYKPLYDPENLKPRS 155
            MEKSLRLQNADLLTEYNLLEADL RPKVKEADFRGKAKHLE++AR+HQPAMLCTLVMT+N D  GVARYPVGIMPV+DP TGETLVD LGRRSFTTSVAYGPT+GKNIALAYLPW+YCQ GRKL VEYFG+TYPVEVA +GYKPLYDPENLKPRS
Sbjct:  183 MEKSLRLQNADLLTEYNLLEADLARPKVKEADFRGKAKHLEYKAREHQPAMLCTLVMTDNVDKNGVARYPVGIMPVLDPETGETLVDALGRRSFTTSVAYGPTIGKNIALAYLPWAYCQPGRKLHVEYFGQTYPVEVAAVGYKPLYDPENLKPRS 337

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BLAST of mRNA_P-wetherbeei_contig55515.1.1 vs. uniprot
Match: A0A4R0PES3_9HYPH (FAD-dependent oxidoreductase n=1 Tax=Oricola cellulosilytica TaxID=1429082 RepID=A0A4R0PES3_9HYPH)

HSP 1 Score: 298 bits (762), Expect = 1.330e-93
Identity = 144/155 (92.90%), Postives = 150/155 (96.77%), Query Frame = 0

Query:    1 MEKSLRLQNADLLTEYNLLEADLQRPKVKEADFRGKAKHLEHRARKHQPAMLCTLVMTENTDAKGVARYPVGIMPVMDPATGETLVDELGRRSFTTSVAYGPTLGKNIALAYLPWSYCQEGRKLIVEYFGETYPVEVAGIGYKPLYDPENLKPRS 155
            MEKSLRLQNADLLTEYNL EADL RPKVKEADFRGKAKHLE+RAR+HQPAMLCTLVMT+NTDA GVARYPVGIMPVMDP TGETLVDELGRRSFTTSVAYGPT+GKNIALAYLPW+YCQEGRKL VEYFGETYPVEVAG+GYKPLYDPENLKPRS
Sbjct:  699 MEKSLRLQNADLLTEYNLYEADLARPKVKEADFRGKAKHLEYRAREHQPAMLCTLVMTDNTDANGVARYPVGIMPVMDPETGETLVDELGRRSFTTSVAYGPTIGKNIALAYLPWNYCQEGRKLSVEYFGETYPVEVAGVGYKPLYDPENLKPRS 853

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BLAST of mRNA_P-wetherbeei_contig55515.1.1 vs. uniprot
Match: B9TKP0_RICCO (Fad oxidoreductase, putative n=1 Tax=Ricinus communis TaxID=3988 RepID=B9TKP0_RICCO)

HSP 1 Score: 282 bits (722), Expect = 2.940e-93
Identity = 136/155 (87.74%), Postives = 146/155 (94.19%), Query Frame = 0

Query:    1 MEKSLRLQNADLLTEYNLLEADLQRPKVKEADFRGKAKHLEHRARKHQPAMLCTLVMTENTDAKGVARYPVGIMPVMDPATGETLVDELGRRSFTTSVAYGPTLGKNIALAYLPWSYCQEGRKLIVEYFGETYPVEVAGIGYKPLYDPENLKPRS 155
            MEKSLRLQNADLLTEYNLLEADL RPKVK+ADFRGKAKHLE+RAR+HQPAMLCTLV+T+N DA GVARYPVGI+PVMDP TGETLVD+LGRRSFTTS+AYGPT+GKNIALAYLPWSY QEGRKL VEYFGE YPVEV G+GYKPLYD ENLKPRS
Sbjct:  183 MEKSLRLQNADLLTEYNLLEADLARPKVKDADFRGKAKHLEYRAREHQPAMLCTLVVTDNIDANGVARYPVGILPVMDPETGETLVDDLGRRSFTTSIAYGPTIGKNIALAYLPWSYAQEGRKLQVEYFGEIYPVEVVGVGYKPLYDAENLKPRS 337

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BLAST of mRNA_P-wetherbeei_contig55515.1.1 vs. uniprot
Match: A0A4S5JF05_9HYPH (FAD-dependent oxidoreductase n=6 Tax=Sinorhizobium/Ensifer group TaxID=227292 RepID=A0A4S5JF05_9HYPH)

HSP 1 Score: 296 bits (759), Expect = 3.670e-93
Identity = 143/155 (92.26%), Postives = 149/155 (96.13%), Query Frame = 0

Query:    1 MEKSLRLQNADLLTEYNLLEADLQRPKVKEADFRGKAKHLEHRARKHQPAMLCTLVMTENTDAKGVARYPVGIMPVMDPATGETLVDELGRRSFTTSVAYGPTLGKNIALAYLPWSYCQEGRKLIVEYFGETYPVEVAGIGYKPLYDPENLKPRS 155
            MEKSLRLQNADLLTEYNLLEADL RPKVKEADFRGKAKHLEHRAR HQPAMLCTLVMTEN D+KGVARYPVGI+PVMDP TGETLVDELGRRSFTTS+AYGPT+GKNIALAYLPWSYCQ GRKL VEYFGETYPVEVAG+GYKPLYDPENLKPR+
Sbjct:  699 MEKSLRLQNADLLTEYNLLEADLARPKVKEADFRGKAKHLEHRARPHQPAMLCTLVMTENVDSKGVARYPVGILPVMDPETGETLVDELGRRSFTTSIAYGPTIGKNIALAYLPWSYCQVGRKLKVEYFGETYPVEVAGVGYKPLYDPENLKPRT 853

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BLAST of mRNA_P-wetherbeei_contig55515.1.1 vs. uniprot
Match: A0A2W4R1T3_9PROT (Dehydrogenase (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4R1T3_9PROT)

HSP 1 Score: 281 bits (718), Expect = 6.280e-93
Identity = 135/155 (87.10%), Postives = 145/155 (93.55%), Query Frame = 0

Query:    1 MEKSLRLQNADLLTEYNLLEADLQRPKVKEADFRGKAKHLEHRARKHQPAMLCTLVMTENTDAKGVARYPVGIMPVMDPATGETLVDELGRRSFTTSVAYGPTLGKNIALAYLPWSYCQEGRKLIVEYFGETYPVEVAGIGYKPLYDPENLKPRS 155
            +EKSLRLQNADLLTEYNL EADL RPKVKEADFRGKAKHLE++AR HQPAMLCTLVMT+NTD+KGVARYPVG MPV+DP TGE LVDELGRRS+TTSVAYGPT+GKNIALAYLPWSYCQEGRKL VEYF E +PVEVA +GYKPLYDPENLKPRS
Sbjct:  163 LEKSLRLQNADLLTEYNLFEADLARPKVKEADFRGKAKHLEYKARPHQPAMLCTLVMTDNTDSKGVARYPVGNMPVLDPDTGEVLVDELGRRSYTTSVAYGPTIGKNIALAYLPWSYCQEGRKLEVEYFAERFPVEVAAVGYKPLYDPENLKPRS 317

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BLAST of mRNA_P-wetherbeei_contig55515.1.1 vs. uniprot
Match: A0A3S3TA23_9HYPH (FAD-dependent oxidoreductase (Fragment) n=1 Tax=Mesorhizobium sp. M2A.F.Ca.ET.039.01.1.1 TaxID=2496746 RepID=A0A3S3TA23_9HYPH)

HSP 1 Score: 288 bits (737), Expect = 6.850e-92
Identity = 140/155 (90.32%), Postives = 148/155 (95.48%), Query Frame = 0

Query:    1 MEKSLRLQNADLLTEYNLLEADLQRPKVKEADFRGKAKHLEHRARKHQPAMLCTLVMTENTDAKGVARYPVGIMPVMDPATGETLVDELGRRSFTTSVAYGPTLGKNIALAYLPWSYCQEGRKLIVEYFGETYPVEVAGIGYKPLYDPENLKPRS 155
            MEKSLRLQNADLLTEYNLLEADL RPKVK+ DF GKAKHLE+RAR+HQPAMLCTLVMTENTD+KGVARYPVG MPV DPA+GETLVDELGRRSFTTSVAYGPT+GKNIALAYLPW+YCQEG KL VEYFGETYPVEVAG+GYKPLYDPENLKPRS
Sbjct:  482 MEKSLRLQNADLLTEYNLLEADLARPKVKDNDFCGKAKHLEYRAREHQPAMLCTLVMTENTDSKGVARYPVGTMPVQDPASGETLVDELGRRSFTTSVAYGPTIGKNIALAYLPWAYCQEGCKLQVEYFGETYPVEVAGVGYKPLYDPENLKPRS 636

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BLAST of mRNA_P-wetherbeei_contig55515.1.1 vs. uniprot
Match: A0A8I1P643_9HYPH (GcvT family protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A8I1P643_9HYPH)

HSP 1 Score: 293 bits (749), Expect = 1.070e-91
Identity = 141/155 (90.97%), Postives = 148/155 (95.48%), Query Frame = 0

Query:    1 MEKSLRLQNADLLTEYNLLEADLQRPKVKEADFRGKAKHLEHRARKHQPAMLCTLVMTENTDAKGVARYPVGIMPVMDPATGETLVDELGRRSFTTSVAYGPTLGKNIALAYLPWSYCQEGRKLIVEYFGETYPVEVAGIGYKPLYDPENLKPRS 155
            MEKSLRLQNADLLTEYNL EADL RPKVKEADFRGKAKHLE+RAR HQPAMLCTLVMT+N D+KG+ARYPVG MPVMDPATGETLVDELGRRSFTTSVAYGPTLGKNIALAYLPW+YCQEGRKL VEYFGET+PVEVA +GYKPLYDPENLKPRS
Sbjct:  699 MEKSLRLQNADLLTEYNLFEADLARPKVKEADFRGKAKHLEYRARPHQPAMLCTLVMTDNRDSKGIARYPVGTMPVMDPATGETLVDELGRRSFTTSVAYGPTLGKNIALAYLPWAYCQEGRKLAVEYFGETFPVEVAAVGYKPLYDPENLKPRS 853

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig55515.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig55515.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A530BK97_9HYPH	4.490e-99	92.26	Aminomethyl transferase family protein (Fragment) ...	[more]
A0A530Y6H8_9HYPH	2.170e-96	88.39	Aminomethyl transferase family protein (Fragment) ...	[more]
A0A530RAX7_9HYPH	5.710e-95	88.39	Aminomethyl transferase family protein (Fragment) ...	[more]
A0A806NEB6_BRUSS	2.550e-94	88.39	Aminomethyltransferase folate-binding domain prote...	[more]
A0A4R0PES3_9HYPH	1.330e-93	92.90	FAD-dependent oxidoreductase n=1 Tax=Oricola cellu...	[more]
B9TKP0_RICCO	2.940e-93	87.74	Fad oxidoreductase, putative n=1 Tax=Ricinus commu...	[more]
A0A4S5JF05_9HYPH	3.670e-93	92.26	FAD-dependent oxidoreductase n=6 Tax=Sinorhizobium...	[more]
A0A2W4R1T3_9PROT	6.280e-93	87.10	Dehydrogenase (Fragment) n=1 Tax=Proteobacteria ba...	[more]
A0A3S3TA23_9HYPH	6.850e-92	90.32	FAD-dependent oxidoreductase (Fragment) n=1 Tax=Me...	[more]
A0A8I1P643_9HYPH	1.070e-91	90.97	GcvT family protein n=1 Tax=Hyphomicrobiales bacte...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013977	Glycine cleavage T-protein, C-terminal barrel domain	PFAM	PF08669	GCV_T_C	coord: 80..138 e-value: 1.5E-10 score: 40.8
IPR027266	GTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1	GENE3D	3.30.1360.120	Probable tRNA modification gtpase trme; domain 1	coord: 1..154 e-value: 5.8E-21 score: 76.4
IPR028896	Aminomethyltransferase-like	PANTHER	PTHR43757	AMINOMETHYLTRANSFERASE	coord: 1..147
None	No IPR available	PANTHER	PTHR43757:SF8	OXIDOREDUCTASE, PUTATIVE-RELATED	coord: 1..147
IPR029043	Glycine cleavage T-protein/YgfZ, C-terminal	SUPERFAMILY	101790	Aminomethyltransferase beta-barrel domain	coord: 79..154

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig55515	contig	P-wetherbeei_contig55515:32..499 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig55515.1.1	mRNA_P-wetherbeei_contig55515.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig55515 32..523 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig55515.1.1 ID=prot_P-wetherbeei_contig55515.1.1|Name=mRNA_P-wetherbeei_contig55515.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=156bp
MEKSLRLQNADLLTEYNLLEADLQRPKVKEADFRGKAKHLEHRARKHQPA
MLCTLVMTENTDAKGVARYPVGIMPVMDPATGETLVDELGRRSFTTSVAY
GPTLGKNIALAYLPWSYCQEGRKLIVEYFGETYPVEVAGIGYKPLYDPEN
LKPRS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013977	GCV_T_C
IPR027266	TrmE/GcvT_dom1
IPR028896	GCST/YgfZ/DmdA
IPR029043	GcvT/YgfZ_C