mRNA_P-wetherbeei_contig55214.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig55214.1.1 vs. uniprot
Match: A0A293N8I4_9GAMM (Acetyl-CoA carboxylase biotin carboxyl carrier protein subunit n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A293N8I4_9GAMM) HSP 1 Score: 56.2 bits (134), Expect = 7.110e-9 Identity = 26/46 (56.52%), Postives = 36/46 (78.26%), Query Frame = 1
Query: 1 MARKDVRAEVAGTVISILSKAGDSLAEGDTLALIEAMKMEIPVAAP 138
MA++DV +EV G V +L AGDS+AEG+ + ++E+MKMEIPV AP
Sbjct: 1 MAKQDVESEVTGNVWKVLKSAGDSVAEGEVIMILESMKMEIPVEAP 46
BLAST of mRNA_P-wetherbeei_contig55214.1.1 vs. uniprot
Match: A0A1G8F871_9NOCA (Biotin-requiring enzyme n=1 Tax=Rhodococcus triatomae TaxID=300028 RepID=A0A1G8F871_9NOCA) HSP 1 Score: 54.7 bits (130), Expect = 2.740e-8 Identity = 26/42 (61.90%), Postives = 33/42 (78.57%), Query Frame = 1
Query: 10 KDVRAEVAGTVISILSKAGDSLAEGDTLALIEAMKMEIPVAA 135
+DVRAE+ TV I+ AGD +AEGDTL ++E+MKMEIPV A
Sbjct: 3 EDVRAEMVSTVFQIVVSAGDEVAEGDTLVILESMKMEIPVVA 44
BLAST of mRNA_P-wetherbeei_contig55214.1.1 vs. uniprot
Match: A0A850DGJ6_9MYCO (Biotin/lipoyl-binding carrier protein n=1 Tax=Mycobacteriaceae bacterium TaxID=2448780 RepID=A0A850DGJ6_9MYCO) HSP 1 Score: 54.7 bits (130), Expect = 2.740e-8 Identity = 25/42 (59.52%), Postives = 34/42 (80.95%), Query Frame = 1
Query: 10 KDVRAEVAGTVISILSKAGDSLAEGDTLALIEAMKMEIPVAA 135
+DVRAE+ TV +++K GDS+ EGDTL ++E+MKMEIPV A
Sbjct: 3 EDVRAEMVSTVFEVVAKPGDSVNEGDTLVILESMKMEIPVVA 44
BLAST of mRNA_P-wetherbeei_contig55214.1.1 vs. uniprot
Match: A0A1F3ZSR9_9PROT (Acetyl-CoA carboxylase biotin carboxyl carrier protein subunit n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 TaxID=1797482 RepID=A0A1F3ZSR9_9PROT) HSP 1 Score: 54.7 bits (130), Expect = 2.880e-8 Identity = 25/43 (58.14%), Postives = 35/43 (81.40%), Query Frame = 1
Query: 1 MARKDVRAEVAGTVISILSKAGDSLAEGDTLALIEAMKMEIPV 129
MAR +V++E+ GTV ++SK GD + GDTLA++E+MKMEIPV
Sbjct: 1 MARIEVKSEITGTVWKVISKPGDRVESGDTLAIVESMKMEIPV 43
BLAST of mRNA_P-wetherbeei_contig55214.1.1 vs. uniprot
Match: UPI002012E20D (acetyl-CoA carboxylase biotin carboxyl carrier protein subunit n=3 Tax=Bradyrhizobium TaxID=374 RepID=UPI002012E20D) HSP 1 Score: 54.3 bits (129), Expect = 4.820e-8 Identity = 25/40 (62.50%), Postives = 33/40 (82.50%), Query Frame = 1
Query: 16 VRAEVAGTVISILSKAGDSLAEGDTLALIEAMKMEIPVAA 135
+ EVAG + +L KAG+S+AEGD +AL+EAMKMEIP+AA
Sbjct: 13 ITTEVAGRICDLLMKAGESVAEGDDIALVEAMKMEIPIAA 52
BLAST of mRNA_P-wetherbeei_contig55214.1.1 vs. uniprot
Match: A0A845BMX5_9PROT (Biotin/lipoyl-binding carrier protein n=1 Tax=Roseomonas coralli TaxID=2545983 RepID=A0A845BMX5_9PROT) HSP 1 Score: 53.5 bits (127), Expect = 8.210e-8 Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 1
Query: 1 MARKDVRAEVAGTVISILSKAGDSLAEGDTLALIEAMKMEIPVAAP 138
MA + AE+ +V I +K GD LAEGDT+ L+E+MKMEIPVAAP
Sbjct: 1 MAEVKIAAEITASVWQIQAKPGDQLAEGDTVMLLESMKMEIPVAAP 46
BLAST of mRNA_P-wetherbeei_contig55214.1.1 vs. uniprot
Match: A0A3N5P0V6_9PROT (Biotin/lipoyl-binding carrier protein n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5P0V6_9PROT) HSP 1 Score: 52.8 bits (125), Expect = 1.650e-7 Identity = 25/45 (55.56%), Postives = 35/45 (77.78%), Query Frame = 1
Query: 1 MARKDVRAEVAGTVISILSKAGDSLAEGDTLALIEAMKMEIPVAA 135
MAR ++++E+ GTV + S+ GD + EGDTL +IE+MKMEIPV A
Sbjct: 1 MARIEIKSEITGTVWQVKSQPGDKVEEGDTLIVIESMKMEIPVIA 45
BLAST of mRNA_P-wetherbeei_contig55214.1.1 vs. uniprot
Match: A0A1W9Z037_9MYCO (Lipoyl-binding domain-containing protein n=5 Tax=Mycobacteriaceae TaxID=1762 RepID=A0A1W9Z037_9MYCO) HSP 1 Score: 52.4 bits (124), Expect = 2.230e-7 Identity = 23/40 (57.50%), Postives = 32/40 (80.00%), Query Frame = 1
Query: 10 KDVRAEVAGTVISILSKAGDSLAEGDTLALIEAMKMEIPV 129
+DVRAE+ +V+ ++ K GD + EGDTL L+E+MKMEIPV
Sbjct: 3 EDVRAEIVASVLEVVVKKGDQIGEGDTLVLLESMKMEIPV 42
BLAST of mRNA_P-wetherbeei_contig55214.1.1 vs. uniprot
Match: A0A4Q3KZQ8_9DELT (Biotin/lipoyl-binding carrier protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A4Q3KZQ8_9DELT) HSP 1 Score: 52.4 bits (124), Expect = 2.340e-7 Identity = 24/41 (58.54%), Postives = 32/41 (78.05%), Query Frame = 1
Query: 13 DVRAEVAGTVISILSKAGDSLAEGDTLALIEAMKMEIPVAA 135
DVR+E+ G V +L KAGD +A GDTL ++E+MKMEIP+ A
Sbjct: 4 DVRSEITGNVWKVLVKAGDRVAAGDTLVILESMKMEIPIEA 44
BLAST of mRNA_P-wetherbeei_contig55214.1.1 vs. uniprot
Match: UPI001B301529 (biotin/lipoyl-binding carrier protein n=1 Tax=Microvirga antarctica TaxID=2819233 RepID=UPI001B301529) HSP 1 Score: 52.4 bits (124), Expect = 2.340e-7 Identity = 27/45 (60.00%), Postives = 34/45 (75.56%), Query Frame = 1
Query: 1 MARKDVRAEVAGTVISILSKAGDSLAEGDTLALIEAMKMEIPVAA 135
MA+ DV +E+ G++ IL + G + EGDTL LIEAMKMEIPVAA
Sbjct: 1 MAKIDVSSEMTGSIWKILVQVGQDVEEGDTLILIEAMKMEIPVAA 45 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig55214.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig55214.1.1 >prot_P-wetherbeei_contig55214.1.1 ID=prot_P-wetherbeei_contig55214.1.1|Name=mRNA_P-wetherbeei_contig55214.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=72bp MARKDVRAEVAGTVISILSKAGDSLAEGDTLALIEAMKMEIPVAAPSAGTback to top mRNA from alignment at P-wetherbeei_contig55214:309..524+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig55214.1.1 ID=mRNA_P-wetherbeei_contig55214.1.1|Name=mRNA_P-wetherbeei_contig55214.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=216bp|location=Sequence derived from alignment at P-wetherbeei_contig55214:309..524+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig55214:309..524+ >mRNA_P-wetherbeei_contig55214.1.1 ID=mRNA_P-wetherbeei_contig55214.1.1|Name=mRNA_P-wetherbeei_contig55214.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=216bp|location=Sequence derived from alignment at P-wetherbeei_contig55214:309..524+ (Phaeothamnion wetherbeei SAG_119_79)back to top |