mRNA_P-wetherbeei_contig5511.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5511.1.1 vs. uniprot
Match: D8LJG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG5_ECTSI) HSP 1 Score: 235 bits (600), Expect = 1.170e-62 Identity = 207/598 (34.62%), Postives = 283/598 (47.32%), Query Frame = 1
Query: 112 LYIATAEERRLLAD--------GAGHRLVEQAEALPAAAWDLLKRPELHHVTNVAVMKISDFIDLLDQVLPAAWRNLRQVAWAPGQALVQPKQPDEAWVRALWCYICKSCGXXXXXXXXXXXXXXXXXXXXXXXXXNAGGRGN--------LRLFEESGWPLLPATSGVGIGALRVMMRLEAGMPLVAPAAAAVMGVGGSLPGNAV-DALSRINVFVLDTAALGPEAASHTVIQNYANKCTTVGVLRAIWSAVLGTT-------NIGGEGGXXXXXXXXXXXXXDEGAGRSLPAQSLQLISARFSGVGVTGRNALRKFFGDRRNSEVTADATPAELRELLRLLPIWQVYS--------RAPMAGAGMAAASGGARRSPANYAALTGLRLPPSGADPTLLDETFVIAETVDDKDLLRSLGIEPMAAQAFSLFYVLPRLR-ESLAQIAAA----------AGQGPAT-GQVSRGPPFTGPVLLKAALLLLETVAADSTGFGGGATGPMTVPLAEALRSTAFVPNNGGDYRRACDLYDPRVSELQSLLAPADFPAQECCQVDILSALVSLGMRRALTADGVLQSARSIQAALTSAPAAPTA 1773
+++ + ERRLLA GAGHRL+E E L A +L +H TNVAVM+ D +L V P AW+ L QVAWAPG V+PKQP E WV LW YICK N GRG +RLFE S WPLLPAT GV +RV++ L MP+V+P A G+G ++ LS++ V++LD +ALG +A + V++ YAN C+ GVL A+ A+ + + G E D G G + + + + RF V R+ALR F R S LL+ LPI++V+ AA+ GA R + A L L P G DP LL F + E+ +D +LL SLG++ + AF +VLP L ES A A + +G AT G V TG LL A+ TV ++ G L ALR++ V + GG+ + DL+DP V EL+SLL P FP+++ C L+ + SLG++ +LT +GVLQSARSI+AA S P P+A
Sbjct: 1809 VFVCSQAERRLLAGPGLGGEGGGAGHRLLESMEDLTHGARVILNNKRVHAATNVAVMEPRDLAGMLGAVFPQAWQGLTQVAWAPGSRDVRPKQPSEDWVSCLWDYICKE----------------------GVGARNGRGRGRAGQDPAEKIRLFERS-WPLLPATGGVKADTIRVLLELHENMPVVSPMAE---GIGSHTMNTSMRKVLSQLGVWILDASALGNQAQNPLVLK-YANACSPAGVLSALQQALFPSPXXXXXXXSTGREISAEATELSAASSEPDFGPGGA----ARRKVDGRFQSVAPAERHALRSFLARIRLSGGGNKRLTDRQVALLKGLPIYRVHGGXXXXXXXXXXXXXXXXAASKTGAERFTSISGAADRLLLAPKGTDPALLGPVFAV-ESSEDTELLESLGVQRVGKGAFFREHVLPGLAAESRAGAAGSRQVGGGGYPPSGDRKATPGTVGAVGSSTGEALLGASQAATITVLSNLQELCAEDPG-----LEAALRASQVVTDGGGEPAQISDLFDPAVDELRSLLGPEAFPSKDLCIPAALAGMRSLGLQTSLTCEGVLQSARSIEAAFAS-PVVPSA 2368
BLAST of mRNA_P-wetherbeei_contig5511.1.1 vs. uniprot
Match: A0A6H5K688_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K688_9PHAE) HSP 1 Score: 231 bits (589), Expect = 3.440e-61 Identity = 196/561 (34.94%), Postives = 268/561 (47.77%), Query Frame = 1
Query: 112 LYIATAEERRLLAD--------GAGHRLVEQAEALPAAAWDLLKRPELHHVTNVAVMKISDFIDLLDQVLPAAWRNLRQVAWAPGQALVQPKQPDEAWVRALWCYICKSCGXXXXXXXXXXXXXXXXXXXXXXXXXNAGGRGNLRLFEESGWPLLPATSGVGIGALRVMMRLEAGMPLVAPAAAAVMGVGGSLPGNAV-DALSRINVFVLDTAALGPEAASHTVIQNYANKCTTVGVLRAIWSAVLGTTNI-GGEGGXXXXXXXXXXXXXDEGAGRSLPAQSLQLISARFSGVGVTGRNALRKFFGDRRNSEVTADATPAELRELLRLLPIWQVYSRAPMAGAGMA----AASGGARRSPANYAALTGLRLPPSGADPTLLDETFVIAETVDDKDLLRSLGIEPMAAQAFSLFYVLPRLRESLAQIAAAAGQGPATGQVSRGPPFTGPVLLKAALLLLETVAADSTGFGGGATGPMTVPLAEALRSTAFVPNNGGDYRRACDLYDPRVSELQSLLAPADFPAQECCQVDILSALVSLGMRRALTADGVLQSARSIQAALTS 1752
+++ + ERRLLA GAGHRL+E E L A +L +H TNVAVM+ D +L V P AW+ L QVAWAPG V+PKQP E WV LW YICK G XXXXX +RLFE S WPLLPAT GV +RV++ L MP+V+P A G+G ++ LS++ V++LD +ALG +A + V++ YAN C+ GVL A+ A+ + GG G + + + RF V R+ALR F R S LL+ LPI++V+ + A GA R + A L L P G DP LL F + +VD +LL SLG++ + AF +VLP + A AAG G S+ T L L+ + A+ G L ALR++ V + GG+ + DL+DP V EL+SLL P FP+++ C L+ + SLG++ +LT +GVLQSARSI+AA S
Sbjct: 1120 VFVCSQAERRLLAGPGLGGEGGGAGHRLLESMEDLTQGARVILNNKRVHAATNVAVMEPRDLAGMLGAVFPQAWKGLTQVAWAPGSRDVRPKQPSEDWVSCLWDYICKE-GVGTSNGRXXXXXRQDPAE-------------KVRLFERS-WPLLPATGGVKADTIRVLLELHEDMPVVSPMAE---GIGSHKMNTSMRKVLSQLGVWILDASALGNQAQNPLVLK-YANACSPAGVLSALQQALFPSPPPRGGSTGRDMLAEATELSASSSEPDFGPGGAARRKVDGRFQSVAPAERHALRSFLARIRLSGGGNKRLTDRQVALLKGLPIYRVHGGGSVXXXXXXXXXXAGKTGAERFTSISGAADRLLLAPKGTDPVLLGPVFAVESSVDT-ELLESLGVQRVGKGAFFREHVLPGVAAE--SRAGAAGSRHVGGGASQAATVT-------VLSNLQELCAEDPG------------LEAALRASQVVTDGGGEPAQISDLFDPAVDELRSLLGPEAFPSKDFCIPAALAGMRSLGLQTSLTCEGVLQSARSIEAAFAS 1639
BLAST of mRNA_P-wetherbeei_contig5511.1.1 vs. uniprot
Match: A0A835YL62_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL62_9STRA) HSP 1 Score: 151 bits (382), Expect = 1.580e-34 Identity = 197/649 (30.35%), Postives = 268/649 (41.29%), Query Frame = 1
Query: 124 TAEERRLLADGAGHRLVEQAEALPAAAWDLLKRPELHHV------TNVAVMKISDFIDLLDQVLPAAWRNLRQVAWAPGQALVQPKQPDEAWVRALWCYICKSCGXXXXXXXXXXXXXXXXXXXXXXXXXNAGGRGNLRLFEESGWPLLPATSGVGIGALRVMMRLEAG--MPLVAPAAAAVMGVGG------SLPGNAVDALSRINVFVLDTAALGPEAASHTVIQNYANK--------CTT----------------VGVLRAIWSA-VLGTTNIGGEGGXXXXXXXXXXXXXDEGAGRSL------------PAQSLQLISARFSGVGVTGRNALRKFFGDRRNSEVTAD-----ATPAE---------------------------LRELLR-----LLPIWQVYSRAPMAGAGMAAASGGARRSPANYAALTGLR---LPPSGADPTLLDETFVIAETVDDKDLLRSLGIEPMAAQAFSLFYVLPRLRESLAQIAAAAGQGPATGQVSRGPPFTGPVLLKAALLLLETVAADSTGFGGGATGPMTVPLAEALRSTAFVPNNGGDYRRACDLYDPRVSELQSLLAPADFPAQECCQVDILSALVSLGMRRALTADGVLQSARSIQAALTSAPAAPTAASAAGPPQ 1797
+A ER+L AD AG LV L LLK H V TNVAVM+ + L+ +VLP AW L QVAWAP +PKQP EAW++ LW Y+C + R L LFE GWPLLPA G G ALRV+++L G M +V+P + GG +L +AL R+ V+VLD LG + A++ ++ +YA CT + +L + +A L TN G A R + P +S L S R + GV + + D + + D ATP+ LRE LR L P + RA + + +S G YAAL G R LPP+ D LLD++FV +D +L + LG+ M AF L Y+LP + A G +S F LKAA LE + ST AT P P +A ST+ ++ R +LY+P V+EL+ LLA + FP + C L+ L LG+R +L+A GVL SARSI A ++ A TAA+ PQ
Sbjct: 2404 SALERKLFADAAGQWLVADLATLTRPVVTLLKDEHFHEVRKCYRATNVAVMQPQHAVRLMKEVLPQAWFQLSQVAWAPSAGDARPKQPSEAWMQQLWEYMCMMSSDGDDNDGAVTADQ------------SEAARQRLHLFE-GGWPLLPAHGGAGADALRVLLQLRGGGCMAVVSP-----VRPGGRYASTLNLNSEVKEALGRLGVWVLDVEGLGKKTAANPLVLDYARALRIVLRRHCTCACHSYQWPPHSCSLCFLNMLSILLAADQLNCTNPGAMTHMPTCWARCGVLNMARCALRLMAIPPNAQYAHKSPLRSCSLYSRRCTAEGVLSALLVALYGADAAAAALNTDKTLAAATPSASVAPPPGLQPALITNRFRGMAPPAREALREFLRKGEGQLKPALKWLLRA-LPLYPLHGSSEGC------YAALDGGRERHLPPANVDAALLDDSFVKVYDTEDLELCQYLGVSRMKPAAFHLRYILPCIA-----CGALTGILRDAAVLSILKDFNS---LKAAEPELEALM-RSTPLIPPATTPF--PSTDAGTSTS---SSTAALLRPDELYNPEVAELRKLLAASAFPRADFCAPAALTTLAQLGLRSSLSAAGVLDSARSIADAFSAG--AVTAAAVPHAPQ 3011
BLAST of mRNA_P-wetherbeei_contig5511.1.1 vs. uniprot
Match: A0A7S2UD61_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UD61_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 5.530e-15 Identity = 88/282 (31.21%), Postives = 127/282 (45.04%), Query Frame = 1
Query: 910 SLPAQSL-----QLISARFSGVGVTGRNALRKFFGDRRNSEVTADATPAELRELLRLLPIWQVYSRAPMAGAGMAAASGGARRSPANYAALTGLRLPPSGADPTLLDETFVIAETVDDKDLLRSLGIEPMAAQAFSLFYVLPRLRESLAQIAAAAGQGPATGQVSRGPPFTGPVLLKAALLLLETVAADSTGFGGGATGPMTVPLAEALRSTAFVPNNGGDYRRACDLYDPRVSELQSLLAPADFPAQECCQVDILSALVSLGMRRALTADGVLQSARSIQA 1740
SLP+ L + + R + R+ LR F D R+ + +A +E +L+ LPI++VY+R G + LT LPP+ DP LDETFV + D +LL LG+ + A+ +V PR+ E G VS P + K LL + ++++ A V E L F+PN GD RA DLYDP +L + PA+ C + LS+L LG++ LTA GVL+SARSI+A
Sbjct: 1120 SLPSDILDEDLIRRVGLRCKFLSTKERDLLRGFLRDPRHRD---EAFDSESVRMLKALPIFRVYTR-------------GDDKPVQCENLLTERFLPPTDFDPAFLDETFVHTTSQRDVELLELLGVRKIGLAAYFERWVCPRIIE---------------GNVS--PEVRDLAINK---LLQQDLSSEM------ANNSNDVSWKEQLSEMQFIPNRNGDLVRARDLYDPTELGTTGILDGSMLPAKPFCHIGALSSLRLLGLKSRLTASGVLESARSIEA 1359
BLAST of mRNA_P-wetherbeei_contig5511.1.1 vs. uniprot
Match: A0A7S4VLU2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VLU2_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 1.580e-11 Identity = 59/186 (31.72%), Postives = 90/186 (48.39%), Query Frame = 1
Query: 1180 LPPSGADPTLLDETFVIAETVDDKDLLRSLGIEPMAAQAFSLFYVLPRLRESLAQIAAAAGQGPATGQVSRGPPFTGPVLLKAALLLLETVAADSTGFGGGATGPMTVPLAEALRSTAFVPNNGGDYRRACDLYDPRVSELQSLLAPADFPAQECCQVDILSALVSLGMRRALTADGVLQSARSIQ 1737
LPP+ AD ++LD F+ ++++LL LG++ M + +V P++ + G T + K +L+ +A D G +G + + L+ F+PN G A DLYDP S+L LL + PA+ CQ LS+L SLGMR L+ADGV+ ARSI+
Sbjct: 363 LPPACADTSILDSKFIKVSNQNERELLEKLGVKEMNLAFYYESHVCPKIID-----------GGITDK-------------KRESAVLKLLAQDLPNIAEGESGQVWIDRISQLK---FIPNRNGLAVCANDLYDPNESDLAKLLDESMLPAKAICQGTALSSLRSLGMRSKLSADGVIDIARSIE 521
BLAST of mRNA_P-wetherbeei_contig5511.1.1 vs. uniprot
Match: D0ABB5_9ORYZ (OO_Ba0005L10-OO_Ba0081K17.24 protein n=1 Tax=Oryza officinalis TaxID=4535 RepID=D0ABB5_9ORYZ) HSP 1 Score: 63.5 bits (153), Expect = 1.240e-6 Identity = 60/187 (32.09%), Postives = 84/187 (44.92%), Query Frame = 1
Query: 1180 LPPSGADPTLLDETFVIAETVDDKDLL-RSLGIEPMAAQAFSLFYVLPRLRESLAQIAAAAGQGPATGQVSRGPPFTGPVLLKAALLLLETVAADSTGFGGGATGPMTVPLAEALRSTAFVPNNGGDYRRACDLYDPRVSELQSLLAPAD-FPAQECCQVDILSALVSLGMRRALTADGVLQSARSI 1734
LPP G LL++ FV + D+D++ R GIE M F YVL RL E + F VLL L L ++ ++ F EAL+ FVP G + LYDPRV EL +LL +D FP ++L L+ LG+R +++ D ++QSAR I
Sbjct: 754 LPPLGVAEQLLNDDFVFCISPSDEDIIMRYYGIERMPKSNFYQRYVLNRLDELQTE-------------------FRDSVLLTI-LQDLPQLSLENPRFK------------EALKVLRFVPTTNGVLKSPQSLYDPRVEELYALLQESDCFPHGLFQNPEVLDMLLCLGLRTSVSIDTIIQSARHI 908
BLAST of mRNA_P-wetherbeei_contig5511.1.1 vs. uniprot
Match: UPI000D1C28F7 (sacsin-like n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C28F7) HSP 1 Score: 62.4 bits (150), Expect = 2.650e-6 Identity = 57/185 (30.81%), Postives = 86/185 (46.49%), Query Frame = 1
Query: 1186 PSGADPTLLDETFVIAETVDDKDLLRS-LGIEPMAAQAFSLFYVLPRLRESLAQIAAAAGQGPATGQVSRGPPFTGPVLLKAALLLLETVAADSTGFGGGATGPMTVPLAEALRSTAFVPNNGGDYRRACDLYDPRVSELQSLL-APADFPAQECCQVDILSALVSLGMRRALTADGVLQSARSI 1734
P G D LL + F+ AET ++ +L++ LG++ + + + Y + ++ QVS G +KA L + + +A G M +L AFVP LYDPR+SEL +LL A FPA E D+L LV LG+R++L +G+L SARS+
Sbjct: 1817 PDGIDGQLLADMFIQAETGKEEHILQTYLGLKKVDKKDYFASYFVDCIK-----------------QVSEGD------RMKAFLKVSKELALF--------IGEMEEAALASLSQLAFVPTGSNAIEAPERLYDPRISELLTLLDRKAFFPAHEFQAADLLDVLVVLGLRKSLKQEGLLDSARSV 1970
BLAST of mRNA_P-wetherbeei_contig5511.1.1 vs. uniprot
Match: D8S6M7_SELML (RING-type domain-containing protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S6M7_SELML) HSP 1 Score: 62.4 bits (150), Expect = 2.800e-6 Identity = 57/185 (30.81%), Postives = 86/185 (46.49%), Query Frame = 1
Query: 1186 PSGADPTLLDETFVIAETVDDKDLLRS-LGIEPMAAQAFSLFYVLPRLRESLAQIAAAAGQGPATGQVSRGPPFTGPVLLKAALLLLETVAADSTGFGGGATGPMTVPLAEALRSTAFVPNNGGDYRRACDLYDPRVSELQSLL-APADFPAQECCQVDILSALVSLGMRRALTADGVLQSARSI 1734
P G D LL + F+ AET ++ +L++ LG++ + + + Y + ++ QVS G +KA L + + +A G M +L AFVP LYDPR+SEL +LL A FPA E D+L LV LG+R++L +G+L SARS+
Sbjct: 2188 PDGIDGQLLADMFIQAETGKEEHILQTYLGLKKVDKKDYFASYFVDCIK-----------------QVSEGD------RMKAFLKVSKELALF--------IGEMEEAALASLSQLAFVPTGSNAIEAPERLYDPRISELLTLLDRKAFFPAHEFQAADLLDVLVVLGLRKSLKQEGLLDSARSV 2341
BLAST of mRNA_P-wetherbeei_contig5511.1.1 vs. uniprot
Match: A0A6V7NR69_ANACO (Uncharacterized protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7NR69_ANACO) HSP 1 Score: 62.0 bits (149), Expect = 3.590e-6 Identity = 63/191 (32.98%), Postives = 84/191 (43.98%), Query Frame = 1
Query: 1174 LRLPPSGADPTLLDETFVIAETVDDKDLL-RSLGIEPMAAQAFSLFYVLPRLRESLAQIAAAAGQGPATGQVSRGPPFTGPVLLKAALLLLETVAADSTGFGGGATGPMTVPL-AEALRSTAFVPNNGGDYRRACDLYDPRVSELQSLLAPAD-FPAQECCQVDILSALVSLGMRRALTADGVLQSARSIQ 1737
L LPP G LLD F+ + ++++L R L IE M +F VL R+ E +I A V+L L + D PL E+LR FVP G R LYDPRV EL LL +D FP + D+L L+SLG+R ++ D V+QSAR I+
Sbjct: 746 LYLPPLGMPEYLLDGDFIFCSSQSEEEILMRYLKIERMKRSSFYKKSVLNRVGELQPEIRDA-------------------VMLTVLRELPQLCLED--------------PLFKESLRVLNFVPTITGSLRSPQSLYDPRVEELYVLLQESDCFPCGLFQESDVLDMLLSLGLRTSVHLDTVIQSARQIE 903
BLAST of mRNA_P-wetherbeei_contig5511.1.1 vs. uniprot
Match: A0A0K9P1Q9_ZOSMR (RING-type domain-containing protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9P1Q9_ZOSMR) HSP 1 Score: 57.4 bits (137), Expect = 9.710e-5 Identity = 53/178 (29.78%), Postives = 80/178 (44.94%), Query Frame = 1
Query: 1207 LLDETFVIAETVDDKDLLR-SLGIEPMAAQAFSLFYVLPRLRESLAQIAAAAGQGPATGQVSRGPPFTGPVLLKAALLLLETVAADSTGFGGGATGPMTVPLAEALRSTAFVPNNGGDYRRACDLYDPRVSELQSLL-APADFPAQECCQVDILSALVSLGMRRALTADGVLQSARSI 1734
LLD+ FV E+ +K++LR + I+ F +VL + + L F P +L LL ++T++ D++ + L FV G ++ LYDPRVS LQ LL A FP + + L LV+LG+RR+L G+L SARS+
Sbjct: 2258 LLDDKFVRTESEREKNVLRVHIDIKEPTKSEFYKNHVLNNMSDFL---------------------FLQPTMLSTILLDVKTLSEDTS-------------MKALLSEIPFVLAANGVWQSPSRLYDPRVSGLQELLHKDAFFPCDKFLNTETLEILVNLGLRRSLGFTGLLDSARSV 2401 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5511.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5511.1.1 >prot_P-wetherbeei_contig5511.1.1 ID=prot_P-wetherbeei_contig5511.1.1|Name=mRNA_P-wetherbeei_contig5511.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=606bp ELSSNRRDIWHGADMAAAAGRPAPPPVAPAVVAAPQKLYIATAEERRLLAback to top mRNA from alignment at P-wetherbeei_contig5511:2..3014- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5511.1.1 ID=mRNA_P-wetherbeei_contig5511.1.1|Name=mRNA_P-wetherbeei_contig5511.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3013bp|location=Sequence derived from alignment at P-wetherbeei_contig5511:2..3014- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5511:2..3014- >mRNA_P-wetherbeei_contig5511.1.1 ID=mRNA_P-wetherbeei_contig5511.1.1|Name=mRNA_P-wetherbeei_contig5511.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1818bp|location=Sequence derived from alignment at P-wetherbeei_contig5511:2..3014- (Phaeothamnion wetherbeei SAG_119_79)back to top |