mRNA_P-wetherbeei_contig5511.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5511.1.1
Unique NamemRNA_P-wetherbeei_contig5511.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5511.1.1 vs. uniprot
Match: D8LJG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG5_ECTSI)

HSP 1 Score: 235 bits (600), Expect = 1.170e-62
Identity = 207/598 (34.62%), Postives = 283/598 (47.32%), Query Frame = 1
Query:  112 LYIATAEERRLLAD--------GAGHRLVEQAEALPAAAWDLLKRPELHHVTNVAVMKISDFIDLLDQVLPAAWRNLRQVAWAPGQALVQPKQPDEAWVRALWCYICKSCGXXXXXXXXXXXXXXXXXXXXXXXXXNAGGRGN--------LRLFEESGWPLLPATSGVGIGALRVMMRLEAGMPLVAPAAAAVMGVGGSLPGNAV-DALSRINVFVLDTAALGPEAASHTVIQNYANKCTTVGVLRAIWSAVLGTT-------NIGGEGGXXXXXXXXXXXXXDEGAGRSLPAQSLQLISARFSGVGVTGRNALRKFFGDRRNSEVTADATPAELRELLRLLPIWQVYS--------RAPMAGAGMAAASGGARRSPANYAALTGLRLPPSGADPTLLDETFVIAETVDDKDLLRSLGIEPMAAQAFSLFYVLPRLR-ESLAQIAAA----------AGQGPAT-GQVSRGPPFTGPVLLKAALLLLETVAADSTGFGGGATGPMTVPLAEALRSTAFVPNNGGDYRRACDLYDPRVSELQSLLAPADFPAQECCQVDILSALVSLGMRRALTADGVLQSARSIQAALTSAPAAPTA 1773
            +++ +  ERRLLA         GAGHRL+E  E L   A  +L    +H  TNVAVM+  D   +L  V P AW+ L QVAWAPG   V+PKQP E WV  LW YICK                            N  GRG         +RLFE S WPLLPAT GV    +RV++ L   MP+V+P A    G+G      ++   LS++ V++LD +ALG +A +  V++ YAN C+  GVL A+  A+  +        + G E               D G G +    + + +  RF  V    R+ALR F    R S             LL+ LPI++V+                  AA+  GA R  +   A   L L P G DP LL   F + E+ +D +LL SLG++ +   AF   +VLP L  ES A  A +          +G   AT G V      TG  LL A+     TV ++         G     L  ALR++  V + GG+  +  DL+DP V EL+SLL P  FP+++ C    L+ + SLG++ +LT +GVLQSARSI+AA  S P  P+A
Sbjct: 1809 VFVCSQAERRLLAGPGLGGEGGGAGHRLLESMEDLTHGARVILNNKRVHAATNVAVMEPRDLAGMLGAVFPQAWQGLTQVAWAPGSRDVRPKQPSEDWVSCLWDYICKE----------------------GVGARNGRGRGRAGQDPAEKIRLFERS-WPLLPATGGVKADTIRVLLELHENMPVVSPMAE---GIGSHTMNTSMRKVLSQLGVWILDASALGNQAQNPLVLK-YANACSPAGVLSALQQALFPSPXXXXXXXSTGREISAEATELSAASSEPDFGPGGA----ARRKVDGRFQSVAPAERHALRSFLARIRLSGGGNKRLTDRQVALLKGLPIYRVHGGXXXXXXXXXXXXXXXXAASKTGAERFTSISGAADRLLLAPKGTDPALLGPVFAV-ESSEDTELLESLGVQRVGKGAFFREHVLPGLAAESRAGAAGSRQVGGGGYPPSGDRKATPGTVGAVGSSTGEALLGASQAATITVLSNLQELCAEDPG-----LEAALRASQVVTDGGGEPAQISDLFDPAVDELRSLLGPEAFPSKDLCIPAALAGMRSLGLQTSLTCEGVLQSARSIEAAFAS-PVVPSA 2368          
BLAST of mRNA_P-wetherbeei_contig5511.1.1 vs. uniprot
Match: A0A6H5K688_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K688_9PHAE)

HSP 1 Score: 231 bits (589), Expect = 3.440e-61
Identity = 196/561 (34.94%), Postives = 268/561 (47.77%), Query Frame = 1
Query:  112 LYIATAEERRLLAD--------GAGHRLVEQAEALPAAAWDLLKRPELHHVTNVAVMKISDFIDLLDQVLPAAWRNLRQVAWAPGQALVQPKQPDEAWVRALWCYICKSCGXXXXXXXXXXXXXXXXXXXXXXXXXNAGGRGNLRLFEESGWPLLPATSGVGIGALRVMMRLEAGMPLVAPAAAAVMGVGGSLPGNAV-DALSRINVFVLDTAALGPEAASHTVIQNYANKCTTVGVLRAIWSAVLGTTNI-GGEGGXXXXXXXXXXXXXDEGAGRSLPAQSLQLISARFSGVGVTGRNALRKFFGDRRNSEVTADATPAELRELLRLLPIWQVYSRAPMAGAGMA----AASGGARRSPANYAALTGLRLPPSGADPTLLDETFVIAETVDDKDLLRSLGIEPMAAQAFSLFYVLPRLRESLAQIAAAAGQGPATGQVSRGPPFTGPVLLKAALLLLETVAADSTGFGGGATGPMTVPLAEALRSTAFVPNNGGDYRRACDLYDPRVSELQSLLAPADFPAQECCQVDILSALVSLGMRRALTADGVLQSARSIQAALTS 1752
            +++ +  ERRLLA         GAGHRL+E  E L   A  +L    +H  TNVAVM+  D   +L  V P AW+ L QVAWAPG   V+PKQP E WV  LW YICK  G       XXXXX                    +RLFE S WPLLPAT GV    +RV++ L   MP+V+P A    G+G      ++   LS++ V++LD +ALG +A +  V++ YAN C+  GVL A+  A+  +    GG  G                        + + +  RF  V    R+ALR F    R S             LL+ LPI++V+    +          A   GA R  +   A   L L P G DP LL   F +  +VD  +LL SLG++ +   AF   +VLP +       A AAG     G  S+    T        L  L+ + A+  G            L  ALR++  V + GG+  +  DL+DP V EL+SLL P  FP+++ C    L+ + SLG++ +LT +GVLQSARSI+AA  S
Sbjct: 1120 VFVCSQAERRLLAGPGLGGEGGGAGHRLLESMEDLTQGARVILNNKRVHAATNVAVMEPRDLAGMLGAVFPQAWKGLTQVAWAPGSRDVRPKQPSEDWVSCLWDYICKE-GVGTSNGRXXXXXRQDPAE-------------KVRLFERS-WPLLPATGGVKADTIRVLLELHEDMPVVSPMAE---GIGSHKMNTSMRKVLSQLGVWILDASALGNQAQNPLVLK-YANACSPAGVLSALQQALFPSPPPRGGSTGRDMLAEATELSASSSEPDFGPGGAARRKVDGRFQSVAPAERHALRSFLARIRLSGGGNKRLTDRQVALLKGLPIYRVHGGGSVXXXXXXXXXXAGKTGAERFTSISGAADRLLLAPKGTDPVLLGPVFAVESSVDT-ELLESLGVQRVGKGAFFREHVLPGVAAE--SRAGAAGSRHVGGGASQAATVT-------VLSNLQELCAEDPG------------LEAALRASQVVTDGGGEPAQISDLFDPAVDELRSLLGPEAFPSKDFCIPAALAGMRSLGLQTSLTCEGVLQSARSIEAAFAS 1639          
BLAST of mRNA_P-wetherbeei_contig5511.1.1 vs. uniprot
Match: A0A835YL62_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL62_9STRA)

HSP 1 Score: 151 bits (382), Expect = 1.580e-34
Identity = 197/649 (30.35%), Postives = 268/649 (41.29%), Query Frame = 1
Query:  124 TAEERRLLADGAGHRLVEQAEALPAAAWDLLKRPELHHV------TNVAVMKISDFIDLLDQVLPAAWRNLRQVAWAPGQALVQPKQPDEAWVRALWCYICKSCGXXXXXXXXXXXXXXXXXXXXXXXXXNAGGRGNLRLFEESGWPLLPATSGVGIGALRVMMRLEAG--MPLVAPAAAAVMGVGG------SLPGNAVDALSRINVFVLDTAALGPEAASHTVIQNYANK--------CTT----------------VGVLRAIWSA-VLGTTNIGGEGGXXXXXXXXXXXXXDEGAGRSL------------PAQSLQLISARFSGVGVTGRNALRKFFGDRRNSEVTAD-----ATPAE---------------------------LRELLR-----LLPIWQVYSRAPMAGAGMAAASGGARRSPANYAALTGLR---LPPSGADPTLLDETFVIAETVDDKDLLRSLGIEPMAAQAFSLFYVLPRLRESLAQIAAAAGQGPATGQVSRGPPFTGPVLLKAALLLLETVAADSTGFGGGATGPMTVPLAEALRSTAFVPNNGGDYRRACDLYDPRVSELQSLLAPADFPAQECCQVDILSALVSLGMRRALTADGVLQSARSIQAALTSAPAAPTAASAAGPPQ 1797
            +A ER+L AD AG  LV     L      LLK    H V      TNVAVM+    + L+ +VLP AW  L QVAWAP     +PKQP EAW++ LW Y+C                             +   R  L LFE  GWPLLPA  G G  ALRV+++L  G  M +V+P     +  GG      +L     +AL R+ V+VLD   LG + A++ ++ +YA          CT                 + +L  + +A  L  TN G                    A R +            P +S  L S R +  GV     +  +  D   + +  D     ATP+                            LRE LR     L P  +   RA +    +  +S G       YAAL G R   LPP+  D  LLD++FV     +D +L + LG+  M   AF L Y+LP +        A  G       +S    F     LKAA   LE +   ST     AT P   P  +A  ST+   ++     R  +LY+P V+EL+ LLA + FP  + C    L+ L  LG+R +L+A GVL SARSI  A ++   A TAA+    PQ
Sbjct: 2404 SALERKLFADAAGQWLVADLATLTRPVVTLLKDEHFHEVRKCYRATNVAVMQPQHAVRLMKEVLPQAWFQLSQVAWAPSAGDARPKQPSEAWMQQLWEYMCMMSSDGDDNDGAVTADQ------------SEAARQRLHLFE-GGWPLLPAHGGAGADALRVLLQLRGGGCMAVVSP-----VRPGGRYASTLNLNSEVKEALGRLGVWVLDVEGLGKKTAANPLVLDYARALRIVLRRHCTCACHSYQWPPHSCSLCFLNMLSILLAADQLNCTNPGAMTHMPTCWARCGVLNMARCALRLMAIPPNAQYAHKSPLRSCSLYSRRCTAEGVLSALLVALYGADAAAAALNTDKTLAAATPSASVAPPPGLQPALITNRFRGMAPPAREALREFLRKGEGQLKPALKWLLRA-LPLYPLHGSSEGC------YAALDGGRERHLPPANVDAALLDDSFVKVYDTEDLELCQYLGVSRMKPAAFHLRYILPCIA-----CGALTGILRDAAVLSILKDFNS---LKAAEPELEALM-RSTPLIPPATTPF--PSTDAGTSTS---SSTAALLRPDELYNPEVAELRKLLAASAFPRADFCAPAALTTLAQLGLRSSLSAAGVLDSARSIADAFSAG--AVTAAAVPHAPQ 3011          
BLAST of mRNA_P-wetherbeei_contig5511.1.1 vs. uniprot
Match: A0A7S2UD61_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UD61_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 5.530e-15
Identity = 88/282 (31.21%), Postives = 127/282 (45.04%), Query Frame = 1
Query:  910 SLPAQSL-----QLISARFSGVGVTGRNALRKFFGDRRNSEVTADATPAELRELLRLLPIWQVYSRAPMAGAGMAAASGGARRSPANYAALTGLRLPPSGADPTLLDETFVIAETVDDKDLLRSLGIEPMAAQAFSLFYVLPRLRESLAQIAAAAGQGPATGQVSRGPPFTGPVLLKAALLLLETVAADSTGFGGGATGPMTVPLAEALRSTAFVPNNGGDYRRACDLYDPRVSELQSLLAPADFPAQECCQVDILSALVSLGMRRALTADGVLQSARSIQA 1740
            SLP+  L     + +  R   +    R+ LR F  D R+ +   +A  +E   +L+ LPI++VY+R             G  +       LT   LPP+  DP  LDETFV   +  D +LL  LG+  +   A+   +V PR+ E               G VS  P      + K   LL + ++++       A     V   E L    F+PN  GD  RA DLYDP       +L  +  PA+  C +  LS+L  LG++  LTA GVL+SARSI+A
Sbjct: 1120 SLPSDILDEDLIRRVGLRCKFLSTKERDLLRGFLRDPRHRD---EAFDSESVRMLKALPIFRVYTR-------------GDDKPVQCENLLTERFLPPTDFDPAFLDETFVHTTSQRDVELLELLGVRKIGLAAYFERWVCPRIIE---------------GNVS--PEVRDLAINK---LLQQDLSSEM------ANNSNDVSWKEQLSEMQFIPNRNGDLVRARDLYDPTELGTTGILDGSMLPAKPFCHIGALSSLRLLGLKSRLTASGVLESARSIEA 1359          
BLAST of mRNA_P-wetherbeei_contig5511.1.1 vs. uniprot
Match: A0A7S4VLU2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VLU2_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.580e-11
Identity = 59/186 (31.72%), Postives = 90/186 (48.39%), Query Frame = 1
Query: 1180 LPPSGADPTLLDETFVIAETVDDKDLLRSLGIEPMAAQAFSLFYVLPRLRESLAQIAAAAGQGPATGQVSRGPPFTGPVLLKAALLLLETVAADSTGFGGGATGPMTVPLAEALRSTAFVPNNGGDYRRACDLYDPRVSELQSLLAPADFPAQECCQVDILSALVSLGMRRALTADGVLQSARSIQ 1737
            LPP+ AD ++LD  F+     ++++LL  LG++ M    +   +V P++ +           G  T +             K    +L+ +A D      G +G + +     L+   F+PN  G    A DLYDP  S+L  LL  +  PA+  CQ   LS+L SLGMR  L+ADGV+  ARSI+
Sbjct:  363 LPPACADTSILDSKFIKVSNQNERELLEKLGVKEMNLAFYYESHVCPKIID-----------GGITDK-------------KRESAVLKLLAQDLPNIAEGESGQVWIDRISQLK---FIPNRNGLAVCANDLYDPNESDLAKLLDESMLPAKAICQGTALSSLRSLGMRSKLSADGVIDIARSIE 521          
BLAST of mRNA_P-wetherbeei_contig5511.1.1 vs. uniprot
Match: D0ABB5_9ORYZ (OO_Ba0005L10-OO_Ba0081K17.24 protein n=1 Tax=Oryza officinalis TaxID=4535 RepID=D0ABB5_9ORYZ)

HSP 1 Score: 63.5 bits (153), Expect = 1.240e-6
Identity = 60/187 (32.09%), Postives = 84/187 (44.92%), Query Frame = 1
Query: 1180 LPPSGADPTLLDETFVIAETVDDKDLL-RSLGIEPMAAQAFSLFYVLPRLRESLAQIAAAAGQGPATGQVSRGPPFTGPVLLKAALLLLETVAADSTGFGGGATGPMTVPLAEALRSTAFVPNNGGDYRRACDLYDPRVSELQSLLAPAD-FPAQECCQVDILSALVSLGMRRALTADGVLQSARSI 1734
            LPP G    LL++ FV   +  D+D++ R  GIE M    F   YVL RL E   +                   F   VLL   L  L  ++ ++  F             EAL+   FVP   G  +    LYDPRV EL +LL  +D FP       ++L  L+ LG+R +++ D ++QSAR I
Sbjct:  754 LPPLGVAEQLLNDDFVFCISPSDEDIIMRYYGIERMPKSNFYQRYVLNRLDELQTE-------------------FRDSVLLTI-LQDLPQLSLENPRFK------------EALKVLRFVPTTNGVLKSPQSLYDPRVEELYALLQESDCFPHGLFQNPEVLDMLLCLGLRTSVSIDTIIQSARHI 908          
BLAST of mRNA_P-wetherbeei_contig5511.1.1 vs. uniprot
Match: UPI000D1C28F7 (sacsin-like n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C28F7)

HSP 1 Score: 62.4 bits (150), Expect = 2.650e-6
Identity = 57/185 (30.81%), Postives = 86/185 (46.49%), Query Frame = 1
Query: 1186 PSGADPTLLDETFVIAETVDDKDLLRS-LGIEPMAAQAFSLFYVLPRLRESLAQIAAAAGQGPATGQVSRGPPFTGPVLLKAALLLLETVAADSTGFGGGATGPMTVPLAEALRSTAFVPNNGGDYRRACDLYDPRVSELQSLL-APADFPAQECCQVDILSALVSLGMRRALTADGVLQSARSI 1734
            P G D  LL + F+ AET  ++ +L++ LG++ +  + +   Y +  ++                 QVS G        +KA L + + +A           G M      +L   AFVP           LYDPR+SEL +LL   A FPA E    D+L  LV LG+R++L  +G+L SARS+
Sbjct: 1817 PDGIDGQLLADMFIQAETGKEEHILQTYLGLKKVDKKDYFASYFVDCIK-----------------QVSEGD------RMKAFLKVSKELALF--------IGEMEEAALASLSQLAFVPTGSNAIEAPERLYDPRISELLTLLDRKAFFPAHEFQAADLLDVLVVLGLRKSLKQEGLLDSARSV 1970          
BLAST of mRNA_P-wetherbeei_contig5511.1.1 vs. uniprot
Match: D8S6M7_SELML (RING-type domain-containing protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S6M7_SELML)

HSP 1 Score: 62.4 bits (150), Expect = 2.800e-6
Identity = 57/185 (30.81%), Postives = 86/185 (46.49%), Query Frame = 1
Query: 1186 PSGADPTLLDETFVIAETVDDKDLLRS-LGIEPMAAQAFSLFYVLPRLRESLAQIAAAAGQGPATGQVSRGPPFTGPVLLKAALLLLETVAADSTGFGGGATGPMTVPLAEALRSTAFVPNNGGDYRRACDLYDPRVSELQSLL-APADFPAQECCQVDILSALVSLGMRRALTADGVLQSARSI 1734
            P G D  LL + F+ AET  ++ +L++ LG++ +  + +   Y +  ++                 QVS G        +KA L + + +A           G M      +L   AFVP           LYDPR+SEL +LL   A FPA E    D+L  LV LG+R++L  +G+L SARS+
Sbjct: 2188 PDGIDGQLLADMFIQAETGKEEHILQTYLGLKKVDKKDYFASYFVDCIK-----------------QVSEGD------RMKAFLKVSKELALF--------IGEMEEAALASLSQLAFVPTGSNAIEAPERLYDPRISELLTLLDRKAFFPAHEFQAADLLDVLVVLGLRKSLKQEGLLDSARSV 2341          
BLAST of mRNA_P-wetherbeei_contig5511.1.1 vs. uniprot
Match: A0A6V7NR69_ANACO (Uncharacterized protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7NR69_ANACO)

HSP 1 Score: 62.0 bits (149), Expect = 3.590e-6
Identity = 63/191 (32.98%), Postives = 84/191 (43.98%), Query Frame = 1
Query: 1174 LRLPPSGADPTLLDETFVIAETVDDKDLL-RSLGIEPMAAQAFSLFYVLPRLRESLAQIAAAAGQGPATGQVSRGPPFTGPVLLKAALLLLETVAADSTGFGGGATGPMTVPL-AEALRSTAFVPNNGGDYRRACDLYDPRVSELQSLLAPAD-FPAQECCQVDILSALVSLGMRRALTADGVLQSARSIQ 1737
            L LPP G    LLD  F+   +  ++++L R L IE M   +F    VL R+ E   +I  A                   V+L     L +    D              PL  E+LR   FVP   G  R    LYDPRV EL  LL  +D FP     + D+L  L+SLG+R ++  D V+QSAR I+
Sbjct:  746 LYLPPLGMPEYLLDGDFIFCSSQSEEEILMRYLKIERMKRSSFYKKSVLNRVGELQPEIRDA-------------------VMLTVLRELPQLCLED--------------PLFKESLRVLNFVPTITGSLRSPQSLYDPRVEELYVLLQESDCFPCGLFQESDVLDMLLSLGLRTSVHLDTVIQSARQIE 903          
BLAST of mRNA_P-wetherbeei_contig5511.1.1 vs. uniprot
Match: A0A0K9P1Q9_ZOSMR (RING-type domain-containing protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9P1Q9_ZOSMR)

HSP 1 Score: 57.4 bits (137), Expect = 9.710e-5
Identity = 53/178 (29.78%), Postives = 80/178 (44.94%), Query Frame = 1
Query: 1207 LLDETFVIAETVDDKDLLR-SLGIEPMAAQAFSLFYVLPRLRESLAQIAAAAGQGPATGQVSRGPPFTGPVLLKAALLLLETVAADSTGFGGGATGPMTVPLAEALRSTAFVPNNGGDYRRACDLYDPRVSELQSLL-APADFPAQECCQVDILSALVSLGMRRALTADGVLQSARSI 1734
            LLD+ FV  E+  +K++LR  + I+      F   +VL  + + L                     F  P +L   LL ++T++ D++             +   L    FV    G ++    LYDPRVS LQ LL   A FP  +    + L  LV+LG+RR+L   G+L SARS+
Sbjct: 2258 LLDDKFVRTESEREKNVLRVHIDIKEPTKSEFYKNHVLNNMSDFL---------------------FLQPTMLSTILLDVKTLSEDTS-------------MKALLSEIPFVLAANGVWQSPSRLYDPRVSGLQELLHKDAFFPCDKFLNTETLEILVNLGLRRSLGFTGLLDSARSV 2401          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5511.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LJG5_ECTSI1.170e-6234.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K688_9PHAE3.440e-6134.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YL62_9STRA1.580e-3430.35RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7S2UD61_9STRA5.530e-1531.21Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S4VLU2_9STRA1.580e-1131.72Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
D0ABB5_9ORYZ1.240e-632.09OO_Ba0005L10-OO_Ba0081K17.24 protein n=1 Tax=Oryza... [more]
UPI000D1C28F72.650e-630.81sacsin-like n=1 Tax=Selaginella moellendorffii Tax... [more]
D8S6M7_SELML2.800e-630.81RING-type domain-containing protein n=3 Tax=Selagi... [more]
A0A6V7NR69_ANACO3.590e-632.98Uncharacterized protein n=1 Tax=Ananas comosus var... [more]
A0A0K9P1Q9_ZOSMR9.710e-529.78RING-type domain-containing protein n=1 Tax=Zoster... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5511contigP-wetherbeei_contig5511:2..3014 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LJG5
PFAMszf-C3HC4_3
Model size1819
Max annot lvl2759|Eukaryota
KEGG koko:K17592
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0006457,GO:0008150,GO:0009987,GO:0030424,GO:0030425,GO:0030544,GO:0031072,GO:0036477,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044087,GO:0044424,GO:0044444,GO:0044463,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051087,GO:0051128,GO:0051129,GO:0065007,GO:0070628,GO:0070852,GO:0090083,GO:0090084,GO:0097447,GO:0097458,GO:0120025,GO:0120038
Exons4
Evalue1.93e-63
EggNOG OGs28IDA@1|root,2QQPY@2759|Eukaryota
Ec32 ortholog descriptionHistidine kinase-like ATPase, C-terminal domain
Ec32 orthologEc-06_009910.1
Descriptionnegative regulation of inclusion body assembly
Cds size1818
COG categoryS
BRITEko00000,ko01009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186822.0423605-CDS-P-wetherbeei_contig5511:2..12321683186822.0423605-CDS-P-wetherbeei_contig5511:2..1232Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5511 3..1232 -
1683186822.0581253-CDS-P-wetherbeei_contig5511:1423..17201683186822.0581253-CDS-P-wetherbeei_contig5511:1423..1720Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5511 1424..1720 -
1683186822.0694249-CDS-P-wetherbeei_contig5511:1931..21731683186822.0694249-CDS-P-wetherbeei_contig5511:1931..2173Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5511 1932..2173 -
1683186822.0802255-CDS-P-wetherbeei_contig5511:2965..30141683186822.0802255-CDS-P-wetherbeei_contig5511:2965..3014Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5511 2966..3014 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5511.1.1prot_P-wetherbeei_contig5511.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5511 3..3014 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5511.1.1

>prot_P-wetherbeei_contig5511.1.1 ID=prot_P-wetherbeei_contig5511.1.1|Name=mRNA_P-wetherbeei_contig5511.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=606bp
ELSSNRRDIWHGADMAAAAGRPAPPPVAPAVVAAPQKLYIATAEERRLLA
DGAGHRLVEQAEALPAAAWDLLKRPELHHVTNVAVMKISDFIDLLDQVLP
AAWRNLRQVAWAPGQALVQPKQPDEAWVRALWCYICKSCGGGAAGASGPA
GTVNGVTGSGGGGGSNAGGRGNLRLFEESGWPLLPATSGVGIGALRVMMR
LEAGMPLVAPAAAAVMGVGGSLPGNAVDALSRINVFVLDTAALGPEAASH
TVIQNYANKCTTVGVLRAIWSAVLGTTNIGGEGGLGGRGGGGGRSGGDEG
AGRSLPAQSLQLISARFSGVGVTGRNALRKFFGDRRNSEVTADATPAELR
ELLRLLPIWQVYSRAPMAGAGMAAASGGARRSPANYAALTGLRLPPSGAD
PTLLDETFVIAETVDDKDLLRSLGIEPMAAQAFSLFYVLPRLRESLAQIA
AAAGQGPATGQVSRGPPFTGPVLLKAALLLLETVAADSTGFGGGATGPMT
VPLAEALRSTAFVPNNGGDYRRACDLYDPRVSELQSLLAPADFPAQECCQ
VDILSALVSLGMRRALTADGVLQSARSIQAALTSAPAAPTAASAAGPPQL
QSLSSR
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mRNA from alignment at P-wetherbeei_contig5511:2..3014-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5511.1.1 ID=mRNA_P-wetherbeei_contig5511.1.1|Name=mRNA_P-wetherbeei_contig5511.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3013bp|location=Sequence derived from alignment at P-wetherbeei_contig5511:2..3014- (Phaeothamnion wetherbeei SAG_119_79)
GAGCTGAGCTCGAACCGGCGCGACATCTGGCACGGCGCCGACATGGCCGG CGAGGGCCGCCGCCGCTCCGAGTGGAACTCAGTGCTGCTCACCGACGTCA TCGCACCGCTTTACGCCGCACTCATCGAGAGCGCCGCCAAGCTCCTGGGA CCCGGGCCGCGCTTTCTGGCGCTGCTGCCGGCGGCGGACACTGTGGCGCC GTGGACCGTGGTGCAGAGTGCCACATTCGCCGAGCTGAAGAACCGCCCTG TTGTCTGGAGCGAGGTGCATGGCGGGATGTGGCTGGCGCCGAGCCGCTGC CTGGTCATGGAAGGCGCGCCGCCGGCCGCCGCCGCTGCCTTGGCGGGAGT AGGAGGGGGGGCAGCGGCGGCGGGCGTGGCCGACGGAGCTGCGGAGGCGG CAGAACCAGGGGTGGCCACAAGACCGGAGGCGGTGAGGATCGAGCAGTAC CCGAAGGACAAGAACGCGGTGCAAGAGCGGCTGCACGGCTTGCTCATGCA GGAGAACCTCCCGGCGGTGTGGCTGCCGGATGCGCTCCGGAAGAAGATGG AAGACCACTTCGGCGAAAAGTCCAGCCACAGCTTCGTGCGCAAGCACTTC CGCCGTGCCACAGTACCACACCCGTCGCTGGCGGGAAGCATTGGCCGCCG CAACGCGTTTTTCCTGCTGCCGTACGCGGCATACGACCTTAACGGACCCG AACTGGGTGGCCTGGTTGGGCTGCCTTTGGTGCCGCTCGCCAACGGCGAG CTGGCACCATTCAGCTTTCCGACGCTGGCGACGGCGCGGGCGGCGGCAGC CGCAGCGGCGGCGCGGACGGCGACGGCGGCGAAGGAGGCAGCGGCGGCGG GCCGGCCGGCACCGCCGCCGGTCGCGCCAGCGGTGGTGGCGGCGCCACAG AAGCTCTACATCGCGACGGCGGAGGAACGGCGGTTGCTGGCGGACGGTGC CGGGCACCGGCTGGTGGAGCAGGCAGAGGCGCTGCCGGCGGCGGCGTGGG ACCTGCTGAAGCGGCCGGAGCTCCACCATGTCACCAACGTCGCCGTGATG AAGATTTCGGACTTTATCGATCTCCTCGATCAGGCAATTCTACTTGCGGG CCGTTGGGTCATCTTCTGCTGTGCGTCTTTGCCATTCAATTGTTGCATCG CTGTGCCTAGGTTCGTGAAGAGATTTCCGGGCTCAATAAAAGTTGGCTCA TGCTTGGAAGATGGCAGCGTGAGTCTCGGTGGGATGCACTTAGCTTGCAG CTGGCACTTGTTTTCTTCGACCCCTTGCGTTTTCCTTTCCACAGGTGCTG CCGGCGGCGTGGCGCAACCTCCGGCAGGTGGCGTGGGCGCCGGGGCAGGC GCTCGTCCAGCCCAAGCAGCCGGACGAGGCATGGGTGCGGGCCCTCTGGT GCTACATCTGCAAGTCATGCGGCGGCGGCGCGGCGGGCGCATCGGGGCCT GCCGGGACTGTGAACGGCGTCACCGGCAGCGGCGGCGGCGGCGGCAGCAA TGCTGGCGGCCGGGGCAATTTGCGGCTATTCGAAGAGTCCGGGTGGCCGC TGCTGCCCGCCACGAGCGGCGTTGGCATCGGAGCGTTGCGGGTAAGCTGC TGTTTCAAGCATTGTGGCTTGCTTGTCCAGATCCCTTTTTTTTACCGAGG AGTTCTGTGTTACCCGAAAGCAGCCTTACTATGTGAAGCGCAGTCAAAGT CTGCTTCAAAATAGCTTTATCAAAAGACAACTTCACTGTTCTATCTTCCT TTCCTCCGCTTCGCGTTCGTTGTTTGAAGCAGGTGATGATGCGGCTCGAG GCGGGCATGCCGCTGGTGGCGCCGGCCGCCGCTGCTGTCATGGGTGTCGG CGGCAGCCTGCCCGGCAACGCCGTCGACGCGCTCTCCCGCATCAACGTCT TCGTGCTTGACACGGCTGCCCTCGGCCCCGAAGCGGCTTCGCACACCGTC ATCCAGAACTATGCCAACAAGTGTACTACGGTCGGCGTCTTGCGCGCCAT TTGGTCGGCAGTGCTCGGCACGACGAACATCGGCGGCGAGGGCGGGCTCG GCGGCCGTGGTGGCGGCGGCGGCCGCAGCGGCGGGGATGAGGGTGCGGGA CGGTCGCTGCCGGCCCAGAGCCTCCAGCTGATCTCCGCGCGATTCAGCGG CGTGGGAGTGACCGGGCGCAACGCGCTGCGCAAGTTCTTTGGCGACCGCC GCAACTCGGAGGTGACGGCGGACGCCACTCCCGCCGAGCTGCGTGAGCTG CTGCGGCTTTTGCCCATCTGGCAGGTCTACTCACGCGCACCAATGGCCGG CGCGGGTATGGCGGCGGCCAGCGGCGGCGCCAGGCGGTCGCCGGCAAACT ACGCTGCGCTCACGGGCCTGCGGCTGCCGCCGAGCGGCGCAGACCCAACG CTGCTTGACGAGACGTTCGTCATCGCGGAGACCGTTGACGACAAGGATCT GCTGCGATCGCTTGGGATCGAGCCCATGGCCGCTCAGGCGTTCTCCCTGT TCTATGTCTTGCCGCGCCTCAGGGAGTCACTGGCACAGATAGCAGCGGCG GCGGGACAGGGACCGGCGACCGGGCAAGTGAGTCGCGGTCCGCCGTTCAC GGGGCCGGTCCTGCTGAAGGCGGCACTTCTCTTGCTCGAGACTGTCGCTG CTGACAGCACTGGCTTTGGCGGCGGCGCCACCGGTCCCATGACGGTGCCT CTGGCGGAGGCGCTGCGTTCCACTGCCTTCGTGCCGAATAACGGCGGCGA CTACCGCCGCGCGTGCGACCTCTACGACCCTCGCGTGTCGGAGCTCCAGT CGCTGCTGGCGCCTGCAGACTTCCCCGCTCAGGAATGTTGCCAGGTGGAT ATTCTTTCGGCCTTGGTGTCCCTCGGGATGCGGCGTGCGCTAACCGCGGA CGGCGTGCTGCAAAGCGCGCGCTCTATCCAGGCGGCGCTCACCTCGGCGC CAGCGGCACCGACTGCGGCTTCTGCGGCGGGGCCGCCGCAGCTGCAGTCC CTGTCGTCTCGGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5511:2..3014-

>mRNA_P-wetherbeei_contig5511.1.1 ID=mRNA_P-wetherbeei_contig5511.1.1|Name=mRNA_P-wetherbeei_contig5511.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1818bp|location=Sequence derived from alignment at P-wetherbeei_contig5511:2..3014- (Phaeothamnion wetherbeei SAG_119_79)
GAGCTGAGCTCGAACCGGCGCGACATCTGGCACGGCGCCGACATGGCCGC
GGCGGCGGGCCGGCCGGCACCGCCGCCGGTCGCGCCAGCGGTGGTGGCGG
CGCCACAGAAGCTCTACATCGCGACGGCGGAGGAACGGCGGTTGCTGGCG
GACGGTGCCGGGCACCGGCTGGTGGAGCAGGCAGAGGCGCTGCCGGCGGC
GGCGTGGGACCTGCTGAAGCGGCCGGAGCTCCACCATGTCACCAACGTCG
CCGTGATGAAGATTTCGGACTTTATCGATCTCCTCGATCAGGTGCTGCCG
GCGGCGTGGCGCAACCTCCGGCAGGTGGCGTGGGCGCCGGGGCAGGCGCT
CGTCCAGCCCAAGCAGCCGGACGAGGCATGGGTGCGGGCCCTCTGGTGCT
ACATCTGCAAGTCATGCGGCGGCGGCGCGGCGGGCGCATCGGGGCCTGCC
GGGACTGTGAACGGCGTCACCGGCAGCGGCGGCGGCGGCGGCAGCAATGC
TGGCGGCCGGGGCAATTTGCGGCTATTCGAAGAGTCCGGGTGGCCGCTGC
TGCCCGCCACGAGCGGCGTTGGCATCGGAGCGTTGCGGGTGATGATGCGG
CTCGAGGCGGGCATGCCGCTGGTGGCGCCGGCCGCCGCTGCTGTCATGGG
TGTCGGCGGCAGCCTGCCCGGCAACGCCGTCGACGCGCTCTCCCGCATCA
ACGTCTTCGTGCTTGACACGGCTGCCCTCGGCCCCGAAGCGGCTTCGCAC
ACCGTCATCCAGAACTATGCCAACAAGTGTACTACGGTCGGCGTCTTGCG
CGCCATTTGGTCGGCAGTGCTCGGCACGACGAACATCGGCGGCGAGGGCG
GGCTCGGCGGCCGTGGTGGCGGCGGCGGCCGCAGCGGCGGGGATGAGGGT
GCGGGACGGTCGCTGCCGGCCCAGAGCCTCCAGCTGATCTCCGCGCGATT
CAGCGGCGTGGGAGTGACCGGGCGCAACGCGCTGCGCAAGTTCTTTGGCG
ACCGCCGCAACTCGGAGGTGACGGCGGACGCCACTCCCGCCGAGCTGCGT
GAGCTGCTGCGGCTTTTGCCCATCTGGCAGGTCTACTCACGCGCACCAAT
GGCCGGCGCGGGTATGGCGGCGGCCAGCGGCGGCGCCAGGCGGTCGCCGG
CAAACTACGCTGCGCTCACGGGCCTGCGGCTGCCGCCGAGCGGCGCAGAC
CCAACGCTGCTTGACGAGACGTTCGTCATCGCGGAGACCGTTGACGACAA
GGATCTGCTGCGATCGCTTGGGATCGAGCCCATGGCCGCTCAGGCGTTCT
CCCTGTTCTATGTCTTGCCGCGCCTCAGGGAGTCACTGGCACAGATAGCA
GCGGCGGCGGGACAGGGACCGGCGACCGGGCAAGTGAGTCGCGGTCCGCC
GTTCACGGGGCCGGTCCTGCTGAAGGCGGCACTTCTCTTGCTCGAGACTG
TCGCTGCTGACAGCACTGGCTTTGGCGGCGGCGCCACCGGTCCCATGACG
GTGCCTCTGGCGGAGGCGCTGCGTTCCACTGCCTTCGTGCCGAATAACGG
CGGCGACTACCGCCGCGCGTGCGACCTCTACGACCCTCGCGTGTCGGAGC
TCCAGTCGCTGCTGGCGCCTGCAGACTTCCCCGCTCAGGAATGTTGCCAG
GTGGATATTCTTTCGGCCTTGGTGTCCCTCGGGATGCGGCGTGCGCTAAC
CGCGGACGGCGTGCTGCAAAGCGCGCGCTCTATCCAGGCGGCGCTCACCT
CGGCGCCAGCGGCACCGACTGCGGCTTCTGCGGCGGGGCCGCCGCAGCTG
CAGTCCCTGTCGTCTCGG
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