mRNA_P-wetherbeei_contig55055.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig55055.1.1 vs. uniprot
Match: A0A7C4TUH2_9HYPH (Hsp20 family protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TUH2_9HYPH) HSP 1 Score: 147 bits (370), Expect = 2.220e-43 Identity = 67/90 (74.44%), Postives = 80/90 (88.89%), Query Frame = 1
Query: 1 MATLDFAPLFRSSIGFDQLPALFSHAVERPETGYPPYNIEKVGEDQYRIVMAVAGFGMDDIEIVQEQNRLSVPGRLKEPNGNTYLHRGIA 270
MATLDF PLFRS+IGFDQ+P+L SHA++R E+GYPPYNIEKVG+D+YRIVMAVAGF DDIE+VQ+QNRL+V GR+K+P YLHRGIA
Sbjct: 1 MATLDFTPLFRSTIGFDQVPSLLSHALQREESGYPPYNIEKVGDDRYRIVMAVAGFAKDDIEVVQDQNRLTVRGRVKQPTDTVYLHRGIA 90
BLAST of mRNA_P-wetherbeei_contig55055.1.1 vs. uniprot
Match: A0A2W4TL87_9PROT (Heat-shock protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4TL87_9PROT) HSP 1 Score: 130 bits (328), Expect = 4.760e-37 Identity = 58/90 (64.44%), Postives = 75/90 (83.33%), Query Frame = 1
Query: 1 MATLDFAPLFRSSIGFDQLPALFSHAVERPETGYPPYNIEKVGEDQYRIVMAVAGFGMDDIEIVQEQNRLSVPGRLKEPNGNTYLHRGIA 270
MATLDF PL+RS++GFD++ + SHA++R E+GYPPYNIEK G+D+YRIVMAVAGF DDI ++ E+NRL++ G+LKE TYLHRGIA
Sbjct: 1 MATLDFTPLYRSTVGFDRISVILSHAMQREESGYPPYNIEKCGDDRYRIVMAVAGFSKDDITVIAERNRLTIRGQLKEKPERTYLHRGIA 90
BLAST of mRNA_P-wetherbeei_contig55055.1.1 vs. uniprot
Match: A0A3S0RG92_HYPSQ (Hsp20 family protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A3S0RG92_HYPSQ) HSP 1 Score: 127 bits (320), Expect = 6.750e-36 Identity = 59/90 (65.56%), Postives = 68/90 (75.56%), Query Frame = 1
Query: 1 MATLDFAPLFRSSIGFDQLPALFSHAVERPETGYPPYNIEKVGEDQYRIVMAVAGFGMDDIEIVQEQNRLSVPGRLKEPNGNTYLHRGIA 270
MAT DF P+FRSSIGFDQLP L +HA ER GYPPYNIEK+G D +RIVMAVAGF DD+EI+Q +NRL V GR K +LHRG+A
Sbjct: 1 MATFDFTPMFRSSIGFDQLPDLLAHAAEREANGYPPYNIEKIGPDDFRIVMAVAGFARDDLEIIQAENRLIVKGRGKNEEAKNFLHRGLA 90
BLAST of mRNA_P-wetherbeei_contig55055.1.1 vs. uniprot
Match: A0A2W4KT26_9PROT (Heat-shock protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4KT26_9PROT) HSP 1 Score: 126 bits (317), Expect = 2.300e-35 Identity = 58/90 (64.44%), Postives = 72/90 (80.00%), Query Frame = 1
Query: 1 MATLDFAPLFRSSIGFDQLPALFSHAVERPETGYPPYNIEKVGEDQYRIVMAVAGFGMDDIEIVQEQNRLSVPGRLKEPNGNTYLHRGIA 270
MAT D PLFRS++GFD++ L +HA++R + GYPPYNIEK GEDQYRIVMAVAGF DDI I+ E+NRL++ G+LKE TYL+RGIA
Sbjct: 1 MATFDLTPLFRSTVGFDRVQMLLAHAMQREDNGYPPYNIEKCGEDQYRIVMAVAGFSKDDISIIAERNRLTIRGQLKEKPERTYLYRGIA 90
BLAST of mRNA_P-wetherbeei_contig55055.1.1 vs. uniprot
Match: UPI00045EB32A (Hsp20 family protein n=1 Tax=Hyphomicrobium sp. 802 TaxID=1112272 RepID=UPI00045EB32A) HSP 1 Score: 123 bits (309), Expect = 3.260e-34 Identity = 57/90 (63.33%), Postives = 69/90 (76.67%), Query Frame = 1
Query: 1 MATLDFAPLFRSSIGFDQLPALFSHAVERPETGYPPYNIEKVGEDQYRIVMAVAGFGMDDIEIVQEQNRLSVPGRLKEPNGNTYLHRGIA 270
MAT DF P+FRSSIGFDQLP L +HA ER GYPPYNIEK G D +RIVMAVAGF DD+EIVQ ++RL + G+ K+ T+L+RG+A
Sbjct: 1 MATFDFTPMFRSSIGFDQLPDLLAHAAEREANGYPPYNIEKSGPDDFRIVMAVAGFARDDLEIVQAESRLIIKGQAKKEEAKTFLYRGLA 90
BLAST of mRNA_P-wetherbeei_contig55055.1.1 vs. uniprot
Match: F8J9P9_HYPSM (Small heat shock protein n=1 Tax=Hyphomicrobium sp. (strain MC1) TaxID=717785 RepID=F8J9P9_HYPSM) HSP 1 Score: 118 bits (296), Expect = 3.060e-32 Identity = 53/90 (58.89%), Postives = 70/90 (77.78%), Query Frame = 1
Query: 1 MATLDFAPLFRSSIGFDQLPALFSHAVERPETGYPPYNIEKVGEDQYRIVMAVAGFGMDDIEIVQEQNRLSVPGRLKEPNGNTYLHRGIA 270
MAT DF P+FRSSIGF+Q+P L + A++R GYPPYNIEK G D++RIVMAV+GF DD+EIVQ +NRL++ GR + + YL+RG+A
Sbjct: 1 MATFDFTPMFRSSIGFEQIPDLLAQALQRQGDGYPPYNIEKAGADEFRIVMAVSGFSADDLEIVQAENRLTIKGRAENDDQKIYLYRGLA 90
BLAST of mRNA_P-wetherbeei_contig55055.1.1 vs. uniprot
Match: A0A2H6AXB7_9BACT (Small heat shock protein IbpA n=1 Tax=bacterium HR40 TaxID=2035435 RepID=A0A2H6AXB7_9BACT) HSP 1 Score: 110 bits (274), Expect = 9.510e-29 Identity = 54/91 (59.34%), Postives = 67/91 (73.63%), Query Frame = 1
Query: 1 MATLDFAPLFRSSIGFDQLPALFSHAVERPE-TGYPPYNIEKVGEDQYRIVMAVAGFGMDDIEIVQEQNRLSVPGRLKEPNGNTYLHRGIA 270
M LD PL RS+IGFD L L A++ E YPPYNIEK+GE++YRIVMAVAGFG +D+E+V E N +++ GR +EP G TYLHRGIA
Sbjct: 1 MTELDLTPLLRSTIGFDHLSKLLDTALKWDEGASYPPYNIEKLGENRYRIVMAVAGFGPEDLEVVAEPNLVTIRGRRREPEGVTYLHRGIA 91
BLAST of mRNA_P-wetherbeei_contig55055.1.1 vs. uniprot
Match: UPI00042644E7 (Hsp20 family protein n=1 Tax=Azospirillum halopraeferens TaxID=34010 RepID=UPI00042644E7) HSP 1 Score: 108 bits (270), Expect = 3.000e-28 Identity = 54/93 (58.06%), Postives = 67/93 (72.04%), Query Frame = 1
Query: 1 MATLDFAPLFRSSIGFDQLPALFSHAVERPETG--YPPYNIEKVGEDQYRIVMAVAGFGMDDIEIVQEQNRLSVPGRLK-EPNGNTYLHRGIA 270
M + D +PLFRS++GFD+L L HA+ E YPPYNIEK+GED YRI MAVAGFG +DIEI +QN L+V G+ K EP G +L+RGIA
Sbjct: 1 MRSYDLSPLFRSTVGFDRLTRLMEHALNADEASASYPPYNIEKLGEDAYRITMAVAGFGPEDIEITAQQNALTVSGKTKKEPEGGQFLYRGIA 93
BLAST of mRNA_P-wetherbeei_contig55055.1.1 vs. uniprot
Match: A0A3M1J6R4_9PROT (SHSP domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1J6R4_9PROT) HSP 1 Score: 108 bits (270), Expect = 4.880e-28 Identity = 53/93 (56.99%), Postives = 69/93 (74.19%), Query Frame = 1
Query: 1 MATLDFAPLFRSSIGFDQLPALFSHAVERP--ETGYPPYNIEKVGEDQYRIVMAVAGFGMDDIEIVQEQNRLSVPGRLKEPNGNT-YLHRGIA 270
M + DF PL+RS++G+D++PAL A + + YPPYNIEK+GED YRIV+A+AGF DDIEIV E+NRL V G++ EP + YLHRGIA
Sbjct: 1 MVSFDFTPLYRSTVGYDRVPALLQAAAKADISDLSYPPYNIEKLGEDDYRIVIALAGFTKDDIEIVSERNRLIVRGKISEPKEDAVYLHRGIA 93
BLAST of mRNA_P-wetherbeei_contig55055.1.1 vs. uniprot
Match: A0A2D6G1U0_9PROT (Heat-shock protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6G1U0_9PROT) HSP 1 Score: 105 bits (262), Expect = 5.740e-27 Identity = 53/93 (56.99%), Postives = 66/93 (70.97%), Query Frame = 1
Query: 1 MATLDFAPLFRSSIGFDQLPALFSHAVERPET--GYPPYNIEKVGEDQYRIVMAVAGFGMDDIEIVQEQNRLSVPGRLKEPNGNT-YLHRGIA 270
M T DF+PLFR S+GFD++ + A ER E GYPPYNIE V +D YRI MAVAGFG DD++IV ++N LSV G++ + G YLHRGIA
Sbjct: 1 MRTYDFSPLFRYSVGFDRIERMLDTASERAERAPGYPPYNIETVDQDSYRITMAVAGFGEDDLDIVIKENELSVSGKIDQDGGEAKYLHRGIA 93 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig55055.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig55055.1.1 >prot_P-wetherbeei_contig55055.1.1 ID=prot_P-wetherbeei_contig55055.1.1|Name=mRNA_P-wetherbeei_contig55055.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=90bp MATLDFAPLFRSSIGFDQLPALFSHAVERPETGYPPYNIEKVGEDQYRIVback to top mRNA from alignment at P-wetherbeei_contig55055:258..527+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig55055.1.1 ID=mRNA_P-wetherbeei_contig55055.1.1|Name=mRNA_P-wetherbeei_contig55055.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=270bp|location=Sequence derived from alignment at P-wetherbeei_contig55055:258..527+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig55055:258..527+ >mRNA_P-wetherbeei_contig55055.1.1 ID=mRNA_P-wetherbeei_contig55055.1.1|Name=mRNA_P-wetherbeei_contig55055.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=270bp|location=Sequence derived from alignment at P-wetherbeei_contig55055:258..527+ (Phaeothamnion wetherbeei SAG_119_79)back to top |