mRNA_P-wetherbeei_contig5497.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5497.3.1 vs. uniprot
Match: A0A835Z9A8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9A8_9STRA) HSP 1 Score: 129 bits (325), Expect = 4.160e-33 Identity = 67/132 (50.76%), Postives = 82/132 (62.12%), Query Frame = 1
Query: 40 DGGELPPPCVGDFSPVRPREDADVLRRVCHVPVPAGAAVFWDYRTPHANAARNASDRPREVIYTGFLPDTAWNRAYAHQQLDRLLRGIPPDDQWMALSPV-IADAGCENGAASGARGALSEYEWSALGRRLV 432
DG +PPPCVGDF+P+RPR DA+VL+RV +PV AG AVFWD R PHANA RN + R V+YTGFLP T NR Y +QL R + P DQW + PV + DA +YE+S+LGR L
Sbjct: 261 DGSSVPPPCVGDFTPLRPRGDAEVLKRVVPIPVRAGGAVFWDVRLPHANAQRNGAAAARAVVYTGFLPCTPMNRRYVQKQLHDYRRSVIPQDQW--VGPVKMEDA--------------PDYEFSSLGRCLA 376
BLAST of mRNA_P-wetherbeei_contig5497.3.1 vs. uniprot
Match: A0A5D6XPF7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPF7_9STRA) HSP 1 Score: 121 bits (303), Expect = 3.520e-30 Identity = 63/131 (48.09%), Postives = 78/131 (59.54%), Query Frame = 1
Query: 55 PPPCVGDFSPVRPREDADVLRRVCHVPVPAGAAVFWDYRTPHANAARNASDRPREVIYTGFLPDTAWNRAYAHQQLDRLLRGIPPDDQWMALSPVIADAGCENGAASGARGALSEYEWSALGRRLVGLSEW 447
P C+GDFSP+R ED DV+ R HV AG+A+F+D+R PHAN+ R+A PREV+YTGFLPD A NRAY +QL R R + P D W ADA S + +SALG RL+GL W
Sbjct: 245 PQVCLGDFSPLRMAEDRDVIARFAHVGAAAGSAIFFDWRVPHANSYRHAGAAPREVVYTGFLPDVALNRAYVREQLRRYARRLLPADHWQKGD---ADARVAE--------HFSAHHFSALGSRLIGLYPW 364
BLAST of mRNA_P-wetherbeei_contig5497.3.1 vs. uniprot
Match: A0A1Z5KEF9_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KEF9_FISSO) HSP 1 Score: 120 bits (300), Expect = 9.980e-30 Identity = 66/143 (46.15%), Postives = 87/143 (60.84%), Query Frame = 1
Query: 28 VATPDGGE---LPPPCVGDFSPVRPREDADVLRRVCHVPVPAGAAVFWDYRTPHANAARNASDRPREVIYTGFLPDTAWNRAYAHQQLDRLLRGI-PPDDQWMALSPVIADAGCENGAASGARGALSEYEWSALGRRLVGLSE 444
+ T GGE LP PCVG+++ +RPREDA VL+RV H+PV AG+AV WD R PHANA R+ PR V+YT FLPD A NR YA QQL+ + RG PP + ++P E+ LSE + + L RRL+ + +
Sbjct: 227 LVTRKGGETLALPAPCVGEYTHIRPREDAAVLQRVQHIPVTAGSAVLWDNRIPHANAYRHDGTEPRVVVYTSFLPDVAINRQYARQQLEHIRRGRNPPSSGGLWMNPSETT---ESDVKQSNSSILSEDKLTELQRRLLAIDD 366
BLAST of mRNA_P-wetherbeei_contig5497.3.1 vs. uniprot
Match: A0A397AI45_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AI45_9STRA) HSP 1 Score: 116 bits (290), Expect = 1.750e-29 Identity = 57/131 (43.51%), Postives = 80/131 (61.07%), Query Frame = 1
Query: 55 PPPCVGDFSPVRPREDADVLRRVCHVPVPAGAAVFWDYRTPHANAARNASDRPREVIYTGFLPDTAWNRAYAHQQLDRLLRGIPPDDQWMALSPVIADAGCENGAASGARGALSEYEWSALGRRLVGLSEW 447
PP C+GDFSP+R +ED V+ R HVP AG+ + +D+R PHAN+ R+ + PREV+YTGFLP+ NR YA +QL R L + P D W + D + S++E++ALGR+L+GL W
Sbjct: 102 PPVCLGDFSPLRMQEDKAVIARYKHVPADAGSVILFDWRIPHANSYRHVGNIPREVVYTGFLPNVPMNRTYAVEQLRRYLARLLPADHWQKDT---TDKAVDE--------TFSKHEFTALGRKLMGLDPW 221
BLAST of mRNA_P-wetherbeei_contig5497.3.1 vs. uniprot
Match: A0A7S3HN64_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HN64_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.440e-28 Identity = 57/126 (45.24%), Postives = 70/126 (55.56%), Query Frame = 1
Query: 61 PCVGDFSPVRPREDADVLRRVCHVPVPAGAAVFWDYRTPHANAARNASDRPREVIYTGFLPDTAWNRAYAHQQLDRLLRGIPPDDQWMALSPVIADAGCENGAASGARGALSEYEWSALGRRLVGL 438
PCVGDF+P+RP ED DVL + H+P AG V WDYR PHANA N + PR V+Y G LP N YA +QLD+ RG P DQW + A C Y +S LGR+L+G+
Sbjct: 92 PCVGDFTPIRPIEDKDVLEKFRHIPCKAGDLVCWDYRIPHANARHNLAPHPRAVVYIGLLPAVPINERYAQRQLDKFRRGEVPSDQWHEST---ATQPCN-------------YAFSELGRKLMGM 201
BLAST of mRNA_P-wetherbeei_contig5497.3.1 vs. uniprot
Match: W4H058_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H058_9STRA) HSP 1 Score: 116 bits (290), Expect = 2.100e-28 Identity = 57/131 (43.51%), Postives = 80/131 (61.07%), Query Frame = 1
Query: 55 PPPCVGDFSPVRPREDADVLRRVCHVPVPAGAAVFWDYRTPHANAARNASDRPREVIYTGFLPDTAWNRAYAHQQLDRLLRGIPPDDQWMALSPVIADAGCENGAASGARGALSEYEWSALGRRLVGLSEW 447
PP C+GDFSP+R +ED V+ R HVP AG+ + +D+R PHAN+ R+ + PREV+YTGFLP+ NR YA +QL R L + P D W + D + S++E++ALGR+L+GL W
Sbjct: 222 PPVCLGDFSPLRMQEDKAVIARYKHVPADAGSVILFDWRIPHANSYRHVGNIPREVVYTGFLPNVPMNRTYAVEQLRRYLARLLPADHWQKDT---TDKAVDE--------TFSKHEFTALGRKLMGLDPW 341
BLAST of mRNA_P-wetherbeei_contig5497.3.1 vs. uniprot
Match: A0A1E7EII6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EII6_9STRA) HSP 1 Score: 115 bits (289), Expect = 4.000e-28 Identity = 55/135 (40.74%), Postives = 77/135 (57.04%), Query Frame = 1
Query: 52 LPPPCVGDFSPVRPREDADVLRRVCHVPVPAGAAVFWDYRTPHANAARNASDRPREVIYTGFLPDTAWNRAYAHQQLDRLLRGIPPDDQWMALSP---VIADAGCENGAASGARGALSEYEWSALGRRLVGLSEW 447
+P CVG+++ +RP+ED DV+ RVCH+PV AG+AVFWD R PH+NA + PR V+Y FLPD NR Y QL + P DQW +S + D G + Y +++LGR+L+G+ W
Sbjct: 239 IPAACVGEYTHMRPKEDRDVMDRVCHIPVSAGSAVFWDNRIPHSNAYTHNGTIPRAVVYCSFLPDVELNRCYVQNQLLNYKQNRPVKDQWNHISDNVVTVDDVGDQQ--------KKQHYNFTSLGRKLMGIDTW 365
BLAST of mRNA_P-wetherbeei_contig5497.3.1 vs. uniprot
Match: A0A662X5D5_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X5D5_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.050e-26 Identity = 57/134 (42.54%), Postives = 79/134 (58.96%), Query Frame = 1
Query: 55 PPPCVGDFSPVRPREDADVLRRVCHVPVPAGAAVFWDYRTPHANAARNASDRPREVIYTGFLPDTAWNRAYAHQQLDRLLRGIPPDDQWMALSP---VIADAGCENGAASGARGALSEYEWSALGRRLVGLSEW 447
P C+GDFSP+R +ED +V+ R HV AG+ +F+D+R PHAN+ ++ PREV+YTGFLPDT NRAYA +QL R + P D W+ + V+ + LS + +S LG RL+GL W
Sbjct: 242 PQVCLGDFSPLRMQEDREVIDRYQHVGCEAGSVIFFDWRIPHANSYKHVGTIPREVVYTGFLPDTPMNRAYASEQLRRYTGRLLPADHWLKDNTDARVVEE--------------LSAHHFSPLGSRLIGLHPW 361
BLAST of mRNA_P-wetherbeei_contig5497.3.1 vs. uniprot
Match: A0A7S2D5I1_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D5I1_9STRA) HSP 1 Score: 113 bits (283), Expect = 1.150e-26 Identity = 53/94 (56.38%), Postives = 65/94 (69.15%), Query Frame = 1
Query: 40 DGGELPPPCVGDFSPVRPREDADVLRRVCHVPVPAGAAVFWDYRTPHANAARNASDRPREVIYTGFLPDTAWNRAYAHQQLDRLLRGIPPDDQW 321
+GG+ P CVG+F+P+RP+EDA VL R+ HVP AG+ V WD+RTPHANA N REV Y G+LPD NRAYA QL +G+ PDDQW
Sbjct: 322 NGGDAP--CVGEFTPIRPKEDARVLARIEHVPCTAGSLVLWDWRTPHANARYNRGACAREVAYLGYLPDVPLNRAYAAAQLRAYQQGMDPDDQW 413
BLAST of mRNA_P-wetherbeei_contig5497.3.1 vs. uniprot
Match: K8YWA2_NANGC (Phytanoyl-dioxygenase superfamily protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YWA2_NANGC) HSP 1 Score: 110 bits (275), Expect = 1.620e-26 Identity = 56/126 (44.44%), Postives = 72/126 (57.14%), Query Frame = 1
Query: 61 PCVGDFSPVRPREDADVLRRVCHVPVPAGAAVFWDYRTPHANAARNASDRPREVIYTGFLPDTAWNRAYAHQQLDRLLRGIPPDDQWMALSPVIADAGCENGAASGARGALSEYEWSALGRRLVGL 438
PCVGDF+P+RP EDA+V+ R V AG+ + +D+R PHANA + PR+V Y FLPD NR YA +Q R G+ PDDQW EN + G S +E+S LGRRL+G
Sbjct: 138 PCVGDFTPIRPVEDAEVIARFAPVYYQAGSVIAFDWRIPHANATHHVGLEPRQVSYASFLPDVPVNREYARRQAQRFYNGLQPDDQWK-----------ENSDSKEVYGDGSVFEFSDLGRRLLGF 252 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5497.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5497.3.1 >prot_P-wetherbeei_contig5497.3.1 ID=prot_P-wetherbeei_contig5497.3.1|Name=mRNA_P-wetherbeei_contig5497.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=150bp MYVYLCALQVATPDGGELPPPCVGDFSPVRPREDADVLRRVCHVPVPAGAback to top mRNA from alignment at P-wetherbeei_contig5497:2919..3542- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5497.3.1 ID=mRNA_P-wetherbeei_contig5497.3.1|Name=mRNA_P-wetherbeei_contig5497.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=624bp|location=Sequence derived from alignment at P-wetherbeei_contig5497:2919..3542- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5497:2919..3542- >mRNA_P-wetherbeei_contig5497.3.1 ID=mRNA_P-wetherbeei_contig5497.3.1|Name=mRNA_P-wetherbeei_contig5497.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=450bp|location=Sequence derived from alignment at P-wetherbeei_contig5497:2919..3542- (Phaeothamnion wetherbeei SAG_119_79)back to top |