mRNA_P-wetherbeei_contig54945.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54945.1.1 vs. uniprot
Match: UPI001472A34E (SDR family oxidoreductase n=1 Tax=Roseovarius confluentis TaxID=1852027 RepID=UPI001472A34E) HSP 1 Score: 137 bits (345), Expect = 1.250e-37 Identity = 78/145 (53.79%), Postives = 100/145 (68.97%), Query Frame = 1
Query: 22 RVAISGATGGIGRATAHRFHQAGAVLVLIDLDRSALADLATEYGAQTSWHCCDQRDAASIEQTVAAVGAVDVFVNNAGVIIRKPLLDTTNSEISELLAVNMTGSIQMAIGMARHLVA---RRSGVIVNLSSQHAFIGAKDRGLYA 447
RVAISGA G +G+A+A F AGA LVL+D D L A +GA H CDQ D +++ +T A+GAVDVFVNNAG+++RK LLD T+ EI +L VN+ GSI MA+GMAR + + RR GVI NL++QHAF G RG+YA
Sbjct: 2 RVAISGAGGDLGQASAEAFAAAGAELVLVDRDPRRLKATAERFGAVH--HVCDQSDRSAVARTCEAIGAVDVFVNNAGIMVRKNLLDHTDDEIDAVLNVNLRGSILMALGMARQMRSNKGRRGGVICNLATQHAFAGGGGRGIYA 144
BLAST of mRNA_P-wetherbeei_contig54945.1.1 vs. uniprot
Match: A0A3N1KSM1_9PROT (L-xylulose reductase n=1 Tax=Stella humosa TaxID=94 RepID=A0A3N1KSM1_9PROT) HSP 1 Score: 125 bits (315), Expect = 4.880e-33 Identity = 65/149 (43.62%), Postives = 100/149 (67.11%), Query Frame = 1
Query: 1 DMSFAGKRVAISGATGGIGRATAHRFHQAGAVLVLIDLDRSALADLATEYGAQTSWHCCDQRDAASIEQTVAAVGAVDVFVNNAGVIIRKPLLDTTNSEISELLAVNMTGSIQMAIGMARHLVARRSGVIVNLSSQHAFIGAKDRGLYA 447
D+ FAG+RV ++GA G+G A A FH AGA LVL D++ LA +A +GA+ H DQ DAAS+ + V A G VDV ++NAGV++ KPLL+T+ E+ ++ +++ G+I++ + +VAR GVI+++ SQ AF G ++R +YA
Sbjct: 6 DLDFAGRRVLVTGAANGLGAAMAAAFHAAGATLVLADIEEGPLAAVAARHGAEA--HVYDQADAASVARLVEAAGPVDVLISNAGVLVAKPLLETSLEEVRRVIDIDLVGAIRLIQLVGAGMVARGRGVILSIGSQTAFSGGENRAVYA 152
BLAST of mRNA_P-wetherbeei_contig54945.1.1 vs. uniprot
Match: UPI0016630613 (SDR family oxidoreductase n=1 Tax=Azorhizobium oxalatiphilum TaxID=980631 RepID=UPI0016630613) HSP 1 Score: 124 bits (310), Expect = 2.870e-32 Identity = 73/144 (50.69%), Postives = 94/144 (65.28%), Query Frame = 1
Query: 22 RVAISGATGGIGRATAHRFHQAGAVLVLIDLDRSALADLATEYG-AQTSWHCCDQRDAASIEQTVAAVGAVDVFVNNAGVIIRKPLLDTTNSEISELLAVNMTGSIQMAIGMARHL-VARRSGVIVNLSSQHAFIGAKDRGLYA 447
RVAISGA G IG ATA F GA LVLID D +AL+ L G A CDQ + + +G VDVFVNNAGV++RKPLL+T + +I+ +L VN+ G+ +MAIGMAR + A R GVI+N+SS AF+G RG+Y+
Sbjct: 11 RVAISGAAGAIGAATARVFAARGASLVLIDRDEAALSGLRHALGEAVAQVVVCDQAAGEETARALREIGVVDVFVNNAGVLLRKPLLETDDDDIAHVLNVNVVGATRMAIGMARAMRAAGRPGVILNVSSHQAFVGGMGRGIYS 154
BLAST of mRNA_P-wetherbeei_contig54945.1.1 vs. uniprot
Match: A0A5N7RJY6_9BURK (SDR family oxidoreductase n=1 Tax=Alcaligenaceae bacterium SAGV5 TaxID=2558245 RepID=A0A5N7RJY6_9BURK) HSP 1 Score: 121 bits (303), Expect = 2.700e-31 Identity = 72/148 (48.65%), Postives = 99/148 (66.89%), Query Frame = 1
Query: 10 FAGKRVAISGATGGIGRATAHRFHQAGAVLVLIDLDRSALADLATEY--GAQTSWHCCDQRDAASIEQTVAAVGAVDVFVNNAGVIIRKPLLDTTNSEISELLAVNMTGSIQMAIGMARHLVARRSGVIVNLSSQHAFIGAKDRGLYA 447
F G+ V +SGA GG+G+A A F + GA LVL+D D + L LAT GA+T+ + DQ D ASI Q +++VG +DVF+NNA +IRKPLLD + E+ L+ VN+TG+I MA+ AR + R GVIVNL+SQ AF +R +Y+
Sbjct: 5 FEGRSVVVSGACGGLGQALAQAFGERGARLVLLDRDAAELDALATRLDPGARTAVY--DQADPASIAQAMSSVGTIDVFINNAAYMIRKPLLDMEDGEVRHLIDVNLTGAILMAMAAARAM-RDRGGVIVNLASQLAFTSEHERAVYS 149
BLAST of mRNA_P-wetherbeei_contig54945.1.1 vs. uniprot
Match: A0A512N654_9HYPH (3-oxoacyl-ACP reductase n=1 Tax=Reyranella soli TaxID=1230389 RepID=A0A512N654_9HYPH) HSP 1 Score: 121 bits (303), Expect = 3.050e-31 Identity = 62/149 (41.61%), Postives = 96/149 (64.43%), Query Frame = 1
Query: 1 DMSFAGKRVAISGATGGIGRATAHRFHQAGAVLVLIDLDRSALADLATEYGAQTSWHCCDQRDAASIEQTVAAVGAVDVFVNNAGVIIRKPLLDTTNSEISELLAVNMTGSIQMAIGMARHLVARRSGVIVNLSSQHAFIGAKDRGLYA 447
D+ F+G+R+ ++GA G G A A F+ AGA LVL D++ LA +A+ YGA H DQ D AS+E A G VD+ +NNAGV++ KPLL+T+ E+ + ++ G++++ + R +V RR GVI+++ SQ AF G ++R +YA
Sbjct: 6 DLYFSGRRILVTGAANGFGEAMAGLFYAAGAQLVLADIEEQPLAAVASRYGAAA--HVFDQADPASVEDLAKAAGPVDILINNAGVLVAKPLLETSLEEVRRTVDIDFVGALRLIQLIGRGMVERRRGVILSIGSQTAFSGGENRAVYA 152
BLAST of mRNA_P-wetherbeei_contig54945.1.1 vs. uniprot
Match: A0A349SDL3_9GAMM (Uncharacterized protein n=5 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A349SDL3_9GAMM) HSP 1 Score: 117 bits (294), Expect = 7.760e-30 Identity = 62/143 (43.36%), Postives = 90/143 (62.94%), Query Frame = 1
Query: 19 KRVAISGATGGIGRATAHRFHQAGAVLVLIDLDRSALADLATEYGAQTSWHCCDQRDAASIEQTVAAVGAVDVFVNNAGVIIRKPLLDTTNSEISELLAVNMTGSIQMAIGMARHLVARRSGVIVNLSSQHAFIGAKDRGLYA 447
+RV I+GA GGIG A A F GA LVL D +++ L +LAT G DQ +E+ AA G +D+ +NNAG++ PL + + EI++L+A+N+TG I +A +A+ ++AR GVIVN +SQ AF GA DR +Y+
Sbjct: 15 RRVLITGAAGGIGSAMARSFSAHGATLVLADRNQTGLDELATSVGGNPPCLAYDQSIPEEVEKLAAAAGPIDILLNNAGILAMSPLQEQSTEEITQLIAINLTGPILLATALAKGMIARGRGVIVNTASQLAFTGAMDRSVYS 157
BLAST of mRNA_P-wetherbeei_contig54945.1.1 vs. uniprot
Match: A0A0J6CD72_9BORD (3-oxoacyl-[acyl-carrier-protein] reductase FabG n=1 Tax=Bordetella pseudohinzii TaxID=1331258 RepID=A0A0J6CD72_9BORD) HSP 1 Score: 116 bits (291), Expect = 1.720e-29 Identity = 64/146 (43.84%), Postives = 89/146 (60.96%), Query Frame = 1
Query: 10 FAGKRVAISGATGGIGRATAHRFHQAGAVLVLIDLDRSALADLATEYGAQTSWHCCDQRDAASIEQTVAAVGAVDVFVNNAGVIIRKPLLDTTNSEISELLAVNMTGSIQMAIGMARHLVARRSGVIVNLSSQHAFIGAKDRGLYA 447
F GKR+ ISGA GG+GRA A F GA L+L+D LA L E G + CDQ AS+ Q ++ + +DV +NNAG ++RKPL DT E+ LL VN+TG+I +A+ +A + + G IVN++SQ AF DR +Y+
Sbjct: 6 FTGKRIVISGACGGLGRAFASEFAGQGARLMLLDQQADTLAALVGELGGGHDFAACDQAQPASLVQALSGLDQIDVLINNAGYMLRKPLFDTAIDEVGHLLGVNLTGAIILAM-IAAQRMKQAGGTIVNIASQLAFASEADRAIYS 150
BLAST of mRNA_P-wetherbeei_contig54945.1.1 vs. uniprot
Match: A0A8J2Z7R9_9PROT (2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Caldovatus sediminis TaxID=2041189 RepID=A0A8J2Z7R9_9PROT) HSP 1 Score: 115 bits (289), Expect = 3.760e-29 Identity = 64/149 (42.95%), Postives = 93/149 (62.42%), Query Frame = 1
Query: 1 DMSFAGKRVAISGATGGIGRATAHRFHQAGAVLVLIDLDRSALADLATEYGAQTSWHCCDQRDAASIEQTVAAVGAVDVFVNNAGVIIRKPLLDTTNSEISELLAVNMTGSIQMAIGMARHLVARRSGVIVNLSSQHAFIGAKDRGLYA 447
D+ F G+RV ++GA G G A A FH GA LVL D++ AL+ +A GA+ + DQ D AS+E A GAVDV VNNAG+++ PLL TT ++I L+ V++ G I + + +VAR GV++++ SQ AF G ++R +YA
Sbjct: 6 DLEFTGRRVLVTGAANGFGAAIARLFHAHGAGLVLADIEADALSAIAAGLGAEAVAY--DQADPASVEALAARAGAVDVLVNNAGILVAAPLLGTTPAQIRRLIDVDLVGVILLTRLVGAGMVARGRGVVLSIGSQTAFCGGENRAVYA 152
BLAST of mRNA_P-wetherbeei_contig54945.1.1 vs. uniprot
Match: A0A848K0Y8_9HYPH (NAD(P)-dependent dehydrogenase (Short-subunit alcohol dehydrogenase family) n=3 Tax=Xanthobacter TaxID=279 RepID=A0A848K0Y8_9HYPH) HSP 1 Score: 115 bits (288), Expect = 5.300e-29 Identity = 65/149 (43.62%), Postives = 93/149 (62.42%), Query Frame = 1
Query: 1 DMSFAGKRVAISGATGGIGRATAHRFHQAGAVLVLIDLDRSALADLATEYGAQTSWHCCDQRDAASIEQTVAAVGAVDVFVNNAGVIIRKPLLDTTNSEISELLAVNMTGSIQMAIGMARHLVARRSGVIVNLSSQHAFIGAKDRGLYA 447
D+ F G+RV I+GA G G A A + + GA LVL DL+ L +A+ GA+ DQ D AS+ A G VDV VNNAG+++ KPLLDT ++ + L+ V+ G + + G+ R +V RR GVI+++SSQ AF G ++RG+YA
Sbjct: 6 DLDFTGRRVLITGAANGFGAAMAALYAEHGASLVLADLEAEPLRAVASRLGAEAL--VFDQGDLASVADLAAQAGEVDVLVNNAGILVAKPLLDTDLADAARLVNVDFLGVMALMQGIGRGMVERRCGVILSISSQTAFCGGENRGVYA 152
BLAST of mRNA_P-wetherbeei_contig54945.1.1 vs. uniprot
Match: UPI000401712A (SDR family oxidoreductase n=1 Tax=Ottowia thiooxydans TaxID=219182 RepID=UPI000401712A) HSP 1 Score: 115 bits (287), Expect = 6.650e-29 Identity = 63/142 (44.37%), Postives = 90/142 (63.38%), Query Frame = 1
Query: 19 KRVAISGATGGIGRATAHRFHQAGAVLVLIDLDRSALADLATEYGAQTSWHCCDQRDAASIEQTVAAVGAVDVFVNNAGVIIRKPLLDTTNSEISELLAVNMTGSIQMAIGMARHLVARRSGVIVNLSSQHAFIGAKDRGLY 444
+R+AISG+TGG+GR A RFH AG L+LID +R+AL +L + + CDQ ++ I+ A VDVF+NNA + +RKPL + +++E+ +L N G I MAI AR ++ R+SGVIVN++SQ AF R Y
Sbjct: 5 RRIAISGSTGGLGRGIAQRFHDAGDSLLLIDTNRAALDELRAAHFPRADILICDQTHSSDIDAFSVAASDVDVFINNAAMTLRKPLEEMSHTEVRLVLDTNAAGPIAMAIAAARGMLMRKSGVIVNVTSQLAFKPTPGRATY 146 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54945.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54945.1.1 >prot_P-wetherbeei_contig54945.1.1 ID=prot_P-wetherbeei_contig54945.1.1|Name=mRNA_P-wetherbeei_contig54945.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=148bp MSFAGKRVAISGATGGIGRATAHRFHQAGAVLVLIDLDRSALADLATEYGback to top mRNA from alignment at P-wetherbeei_contig54945:2..448- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54945.1.1 ID=mRNA_P-wetherbeei_contig54945.1.1|Name=mRNA_P-wetherbeei_contig54945.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=447bp|location=Sequence derived from alignment at P-wetherbeei_contig54945:2..448- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54945:2..448- >mRNA_P-wetherbeei_contig54945.1.1 ID=mRNA_P-wetherbeei_contig54945.1.1|Name=mRNA_P-wetherbeei_contig54945.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=444bp|location=Sequence derived from alignment at P-wetherbeei_contig54945:2..448- (Phaeothamnion wetherbeei SAG_119_79)back to top |