prot_P-wetherbeei_contig5471.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5471.3.1
Unique Nameprot_P-wetherbeei_contig5471.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length321
Homology
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BLAST of mRNA_P-wetherbeei_contig5471.3.1 vs. uniprot
Match: A0A6H5JRR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRR5_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 1.670e-7
Identity = 32/75 (42.67%), Postives = 45/75 (60.00%), Query Frame = 0 
Query:   81 IVHCRGFSAGGTLECRHTNRGGAVMYNGIAASPDGSRVLAAECAGRAVLIFSRDTATGDLTLRQRMPLLLAPDNI 155
            I+ C G   G  ++C    +G   MYNGIA SP+G R+L ++     +LIF+R   TG L LRQR+ L  +PDN+
Sbjct:  368 IIRCTGIR-GADIDCERLAKGRGAMYNGIAISPNGERLLVSDTVAMQMLIFNRSVETGALRLRQRLDLPGSPDNV 441
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BLAST of mRNA_P-wetherbeei_contig5471.3.1 vs. uniprot
Match: A0A2E1XJ48_9PROT (SGL domain-containing protein n=1 Tax=Parvularcula sp. TaxID=1979207 RepID=A0A2E1XJ48_9PROT)

HSP 1 Score: 55.8 bits (133), Expect = 3.690e-5
Identity = 30/62 (48.39%), Postives = 41/62 (66.13%), Query Frame = 0 
Query:  102 GAVMYNGIAASPDGSRVLAAECAGRAVLIFSRDTATGDLTLRQRMPLLLAPDNIVPEASAAV 163
            G    NG+A SPDG ++ AAE AG A+ +F R+  TG L+L + +PL  +PDNI  +AS AV
Sbjct:  205 GLRFANGLALSPDGGKLYAAETAGNALKVFDRNPQTGALSLSETIPLGASPDNINVDASGAV 266
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5471.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JRR5_9PHAE1.670e-742.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2E1XJ48_9PROT3.690e-548.39SGL domain-containing protein n=1 Tax=Parvularcula... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011042Six-bladed beta-propeller, TolB-likeGENE3D2.120.10.30coord: 55..168
e-value: 4.3E-13
score: 51.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5471contigP-wetherbeei_contig5471:1821..3671 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5471.3.1mRNA_P-wetherbeei_contig5471.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5471 1456..3836 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5471.3.1 ID=prot_P-wetherbeei_contig5471.3.1|Name=mRNA_P-wetherbeei_contig5471.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=321bp
MSARCVFGAAAVGGGGGGRDCGGIWQPRHRNWAGGGGRGWHAYLVSAEEL
DRTTWARKLRGGLKDALQMLATFAGLRLSTIVHCRGFSAGGTLECRHTNR
GGAVMYNGIAASPDGSRVLAAECAGRAVLIFSRDTATGDLTLRQRMPLLL
APDNIVPEASAAVEAVATTACPAGGSGSSDCDGGGSDSVGGGADSAASAA
ATGETAGREKEAYIIGAVALNDFVRFAMEAGAAAAPEKVASTIRGAAVRL
VVRPASADGHSGGGGGDGLDYSIENVVTTDGRRPGGLSGISVGIPLVGGG
YMLGSCRDAGVLVCRPRGSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0110426-blade_b-propeller_TolB-like