mRNA_P-wetherbeei_contig54584.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54584.1.1 vs. uniprot
Match: A0A2P8GI92_9BACT (TonB-linked SusC/RagA family outer membrane protein n=5 Tax=Dyadobacter TaxID=120831 RepID=A0A2P8GI92_9BACT) HSP 1 Score: 237 bits (604), Expect = 4.080e-70 Identity = 123/135 (91.11%), Postives = 128/135 (94.81%), Query Frame = 1
Query: 1 QKVSIHVKNQEIKSVLKELDKSCDVHFTYAPSIFPARYRVNIQVSNKSLGEVLDELLTPLEVSYQVDGQQVILKKEESEPGLITDEVNNSTSLDKQIKGTVKDEKGELLAGVTIMVRGSNQGTVTDAAGSFSLNL 405
QKVSIHVKNQEIKSVLKELDK CDVHFTYAPSIFPAR+RVN+QVSNKSLGEVLDELLTPLEV YQVDGQQVILKKEESEPG TD NNST LDKQIKGTVKDEKG+LLAGVTIMV+GSNQGTVTDAAGSFSLN+
Sbjct: 31 QKVSIHVKNQEIKSVLKELDKICDVHFTYAPSIFPARHRVNVQVSNKSLGEVLDELLTPLEVIYQVDGQQVILKKEESEPGPTTDGANNSTLLDKQIKGTVKDEKGDLLAGVTIMVKGSNQGTVTDAAGSFSLNM 165
BLAST of mRNA_P-wetherbeei_contig54584.1.1 vs. uniprot
Match: A0A5B0FCP5_9BACT (TonB-dependent receptor n=4 Tax=Dyadobacter TaxID=120831 RepID=A0A5B0FCP5_9BACT) HSP 1 Score: 120 bits (302), Expect = 4.000e-29 Identity = 63/137 (45.99%), Postives = 93/137 (67.88%), Query Frame = 1
Query: 4 KVSIHVKNQEIKSVLKELDKSCDVHFTYAPSIFPARYRVNIQVSNKSLGEVLDELLTPLEVSYQVDGQQVILKKEESEPGLITDEVNN---STSLDKQIKGTVKDEKGELLAGVTIMVRGSNQGTVTDAAGSFSLNL 405
++S+ +K ++IK VLKE++KS VHF+Y+P + + V I V + +LGEVL +LLTPL++SY V G+Q++L E P + + NN S+DK + G V DEKG+ L GV+IMV+GSNQGT TD G++ L +
Sbjct: 43 RLSLDLKEKKIKLVLKEIEKSAGVHFSYSPQVIESGRPVTISVKDATLGEVLRQLLTPLQISYDVTGKQIVLSNSEQPPKPVKE--NNPGVQQSIDKSVNGRVTDEKGDALPGVSIMVKGSNQGTTTDNDGNYRLTV 177
BLAST of mRNA_P-wetherbeei_contig54584.1.1 vs. uniprot
Match: A0A2N7B3R8_9BACT (SusC/RagA family TonB-linked outer membrane protein (Fragment) n=1 Tax=Siphonobacter sp. BAB-5405 TaxID=1864825 RepID=A0A2N7B3R8_9BACT) HSP 1 Score: 117 bits (294), Expect = 4.540e-28 Identity = 57/133 (42.86%), Postives = 88/133 (66.17%), Query Frame = 1
Query: 1 QKVSIHVKNQEIKSVLKELDKSCDVHFTYAPSIFPARYRVNIQVSNKSLGEVLDELLTPLEVSYQVDGQQVILKKEESEPGLITDEVNNSTSLDKQIKGTVKDEKGELLAGVTIMVRGSNQGTVTDAAGSFSL 399
Q VS++V+NQ++K+VL EL ++ + FTY P + +V ++ ++ L VLD LLTPL +SYQV GQ ++L+K+ S+ T+ D+ I GTV DEKGE + GV+++++G+ +GTVTD GSF L
Sbjct: 43 QPVSLNVENQDLKAVLNELSRAARIKFTYVPQVIAVENKVTLKAQHERLDVVLDRLLTPLHISYQVSGQYIVLRKQTSQSSTSNPNQPFETTADRTITGTVTDEKGEAIPGVSVLLKGTQRGTVTDPQGSFRL 175
BLAST of mRNA_P-wetherbeei_contig54584.1.1 vs. uniprot
Match: UPI0007D89A76 (TonB-dependent receptor n=1 Tax=Emticicia sp. MM TaxID=1839755 RepID=UPI0007D89A76) HSP 1 Score: 117 bits (293), Expect = 6.520e-28 Identity = 61/137 (44.53%), Postives = 98/137 (71.53%), Query Frame = 1
Query: 4 KVSIHVKNQEIKSVLKELDKSCDVHFTYAPSIFPARYRVNIQVSNKSLGEVLDELLTPLEVSYQVDGQQVILKKEESEPGLITDEVNNSTS---LDKQIKGTVKDEKGELLAGVTIMVRGSNQGTVTDAAGSFSLNL 405
++S+ + Q IK VL E++KS D+ F Y+ ++ A V+I++ N +LG+VL LL+PL++ Y+V G+Q+ILK+ E + GLI +E N T+ LDK IKG+VKD+KGE++ G +I V+G+N+GT +D G FS+++
Sbjct: 46 RISLKAEVQPIKKVLNEIEKSADIRFIYSSNLIKAEKTVSIKMDNSTLGDVLKNLLSPLQLDYKVMGKQIILKRIEPKVGLIENE-NLQTAPIILDKPIKGSVKDDKGEMIVGASIAVKGTNKGTTSDINGEFSMSV 181
BLAST of mRNA_P-wetherbeei_contig54584.1.1 vs. uniprot
Match: A0A2S7IGM9_9BACT (SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Siphonobacter curvatus TaxID=2094562 RepID=A0A2S7IGM9_9BACT) HSP 1 Score: 115 bits (289), Expect = 2.260e-27 Identity = 56/133 (42.11%), Postives = 87/133 (65.41%), Query Frame = 1
Query: 1 QKVSIHVKNQEIKSVLKELDKSCDVHFTYAPSIFPARYRVNIQVSNKSLGEVLDELLTPLEVSYQVDGQQVILKKEESEPGLITDEVNNSTSLDKQIKGTVKDEKGELLAGVTIMVRGSNQGTVTDAAGSFSL 399
Q VS++V+NQ++K+VL EL ++ + FTY P + +V ++ ++ L VLD LLTPL +SYQV GQ ++L+K+ + T+ D+ I GTV DEKGE + GV+++++G+ +GTVTD GSF L
Sbjct: 43 QPVSLNVENQDLKAVLNELSRAARIKFTYVPQVIAVENKVTLKAKHERLDVVLDRLLTPLHISYQVSGQYIVLRKQTPQSSTSNPNQPFETTADRTITGTVTDEKGEAIPGVSVLLKGTQRGTVTDPQGSFRL 175
BLAST of mRNA_P-wetherbeei_contig54584.1.1 vs. uniprot
Match: A0A5B0FWK8_9BACT (SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Dyadobacter sp. UC 10 TaxID=2605428 RepID=A0A5B0FWK8_9BACT) HSP 1 Score: 115 bits (288), Expect = 3.070e-27 Identity = 57/135 (42.22%), Postives = 90/135 (66.67%), Query Frame = 1
Query: 1 QKVSIHVKNQEIKSVLKELDKSCDVHFTYAPSIFPARYRVNIQVSNKSLGEVLDELLTPLEVSYQVDGQQVILKKEESEPGLITDEVNNSTSLDKQIKGTVKDEKGELLAGVTIMVRGSNQGTVTDAAGSFSLNL 405
Q+++I V NQ++K+VL L+K V FTY S+ A+ RV+I K LG+VL+EL P+ V+Y+++G+Q++L K EPG EV +++D+ + G V DEKG+ L GV+I+V+G GT T+ G+F +N+
Sbjct: 9 QRITIQVNNQDMKTVLSRLNKLTQVRFTYNSSLIKAQRRVSINAVEKPLGDVLNELFRPINVTYKIEGKQIVLIKNSPEPGSHLIEVTAPSAIDRTVTGKVSDEKGQPLPGVSIVVKGLKTGTATNTEGNFEINV 143
BLAST of mRNA_P-wetherbeei_contig54584.1.1 vs. uniprot
Match: A0A5R9L3N8_9BACT (SusC/RagA family TonB-linked outer membrane protein n=4 Tax=Dyadobacter TaxID=120831 RepID=A0A5R9L3N8_9BACT) HSP 1 Score: 114 bits (286), Expect = 5.730e-27 Identity = 54/136 (39.71%), Postives = 94/136 (69.12%), Query Frame = 1
Query: 1 QKVSIHVKNQEIKSVLKELDKSCDVHFTYAPSIFPARYRVNIQVSNKSLGEVLDELLTPLEVSYQVDGQQVILKKEESEPG-LITDEVNNSTSLDKQIKGTVKDEKGELLAGVTIMVRGSNQGTVTDAAGSFSLNL 405
Q++++ V NQEIK+VL +L+K + FTY S+ ++ +V++ + L +VLDE+ P+ +SY+++G+QV+L K +EPG LI V+N +++D+ I G V DEKG+ L GV+++V+G GT T+ G++ L++
Sbjct: 31 QRITLQVNNQEIKTVLNKLNKLTQIRFTYNSSLIRSQQKVSVNAVERPLADVLDEIFRPINISYKIEGKQVVLTKSTAEPGSLIPLPVHNPSNIDRTISGKVSDEKGQPLPGVSVVVKGGKNGTATNTEGTYELSV 166
BLAST of mRNA_P-wetherbeei_contig54584.1.1 vs. uniprot
Match: UPI001F3C8F8A (SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Dyadobacter sp. CY326 TaxID=2907300 RepID=UPI001F3C8F8A) HSP 1 Score: 114 bits (286), Expect = 5.730e-27 Identity = 57/135 (42.22%), Postives = 90/135 (66.67%), Query Frame = 1
Query: 1 QKVSIHVKNQEIKSVLKELDKSCDVHFTYAPSIFPARYRVNIQVSNKSLGEVLDELLTPLEVSYQVDGQQVILKKEESEPGLITDEVNNSTSLDKQIKGTVKDEKGELLAGVTIMVRGSNQGTVTDAAGSFSLNL 405
QKV+I V NQEIK+VL +L+K + FTY+ S+ ++ +V+I K L +VLD+L P+ +SY+++G+QV+L K EP V N ++D+ I G V DEKG+ L GV+I+V+ + GT T+A G++ L++
Sbjct: 45 QKVTIQVNNQEIKAVLNKLNKLTQIRFTYSSSLLRSQQKVSINAVEKPLADVLDQLFRPINISYKIEGKQVVLLKGNVEPASAIPAVTNDPAVDRTISGKVSDEKGQPLPGVSIVVKSTKVGTATNAEGAYQLSV 179
BLAST of mRNA_P-wetherbeei_contig54584.1.1 vs. uniprot
Match: A0A327NF89_9BACT (SusC/RagA family TonB-linked outer membrane protein n=3 Tax=Spirosoma TaxID=107 RepID=A0A327NF89_9BACT) HSP 1 Score: 113 bits (282), Expect = 1.970e-26 Identity = 55/137 (40.15%), Postives = 94/137 (68.61%), Query Frame = 1
Query: 4 KVSIHVKNQEIKSVLKELDKSCDVHFTYAPSIFPARYRVNIQVSNKSLGEVLDELLTPLEVSYQVDGQQVILKKEESEPGLITDEVNNST---SLDKQIKGTVKDEKGELLAGVTIMVRGSNQGTVTDAAGSFSLNL 405
++S+ V+NQ IK VL E++KS ++ F Y+ ++ + ++++ + N +LGE L+ LLTPL++ Y+V G+Q++L + E + GLI +V + T LD IKGTV E GE L GV+I+++G+ +GT TD G+F +++
Sbjct: 32 RISLKVENQSIKKVLNEIEKSAEIRFIYSSNLIKSERKISLNLDNSTLGEALENLLTPLQLGYKVLGKQIVLNRVEPKAGLILKDVPDVTVVSPLDIPIKGTVTSESGEQLPGVSIVIKGTQRGTTTDQNGAFKIDV 168
BLAST of mRNA_P-wetherbeei_contig54584.1.1 vs. uniprot
Match: C6W4Z2_DYAFD (TonB-dependent receptor plug n=15 Tax=Dyadobacter TaxID=120831 RepID=C6W4Z2_DYAFD) HSP 1 Score: 112 bits (280), Expect = 3.680e-26 Identity = 55/136 (40.44%), Postives = 92/136 (67.65%), Query Frame = 1
Query: 1 QKVSIHVKNQEIKSVLKELDKSCDVHFTYAPSIFPARYRVNIQVSNKSLGEVLDELLTPLEVSYQVDGQQVILKKEESEPG-LITDEVNNSTSLDKQIKGTVKDEKGELLAGVTIMVRGSNQGTVTDAAGSFSLNL 405
QK++I V N E+K+VL +L+K + FTY+ S+ + +V++ +K LG++LD+L P ++Y++DG+QV+L K EPG + + + N +S+D+ I G V DEKG L GV+I+V+ + GT TD+ G+F L++
Sbjct: 31 QKITIQVSNLEMKTVLTKLNKLTQLRFTYSSSLIKTQRKVSLNAVDKPLGDILDDLFKPANITYKIDGRQVVLIKNPGEPGSALPETIRNQSSIDRNITGKVTDEKGIPLPGVSIVVKDTKAGTATDSEGAFQLSV 166 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54584.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54584.1.1 >prot_P-wetherbeei_contig54584.1.1 ID=prot_P-wetherbeei_contig54584.1.1|Name=mRNA_P-wetherbeei_contig54584.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=135bp QKVSIHVKNQEIKSVLKELDKSCDVHFTYAPSIFPARYRVNIQVSNKSLGback to top mRNA from alignment at P-wetherbeei_contig54584:55..459- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54584.1.1 ID=mRNA_P-wetherbeei_contig54584.1.1|Name=mRNA_P-wetherbeei_contig54584.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=405bp|location=Sequence derived from alignment at P-wetherbeei_contig54584:55..459- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54584:55..459- >mRNA_P-wetherbeei_contig54584.1.1 ID=mRNA_P-wetherbeei_contig54584.1.1|Name=mRNA_P-wetherbeei_contig54584.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=405bp|location=Sequence derived from alignment at P-wetherbeei_contig54584:55..459- (Phaeothamnion wetherbeei SAG_119_79)back to top |