mRNA_P-wetherbeei_contig54451.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54451.1.1 vs. uniprot
Match: N0B8V7_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 TaxID=670307 RepID=N0B8V7_9HYPH) HSP 1 Score: 73.6 bits (179), Expect = 1.330e-12 Identity = 38/64 (59.38%), Postives = 47/64 (73.44%), Query Frame = 1
Query: 1 LHGDAGNDDYVIDNALDINKSRADAGVDDVLASVSYALGAHQENLTLAGIAALNATGNSLANTL 192
L G AGND Y+I N D+ + AG D VL+SV+Y LG++ ENLTL G AA+NATGN+LANTL
Sbjct: 168 LAGGAGNDTYIIQNTTDVVSEASSAGTDTVLSSVTYTLGSNVENLTLTGAAAINATGNALANTL 231
BLAST of mRNA_P-wetherbeei_contig54451.1.1 vs. uniprot
Match: UPI00138AC6CF (calcium-binding protein n=1 Tax=Rhizobium fredii TaxID=380 RepID=UPI00138AC6CF) HSP 1 Score: 70.5 bits (171), Expect = 1.690e-11 Identity = 71/128 (55.47%), Postives = 81/128 (63.28%), Query Frame = 1
Query: 28 YVIDNALDINKSRADAGVDDVLASVSYALGAHQENLTLAGIAALNATGNSLANTLRXXXXXXXXXXXXXXXXXXXXXXGDTLVYDSRDALLDGGLGKDTLLLTGHGVTLNATSLRMVTNIEVIDLRGN 411
YVIDNA D+ A G D V ASVS AL A ENLTL GIAALN TGNSLANTL XXXXXXXXXXXXXXXXXXXXX DT V D+ D ++ G G ++ SL + N+E + G+
Sbjct: 261 YVIDNAGDVVTEAAGGGTDTVQASVSLALAAEVENLTLTGIAALNGTGNSLANTLTXXXXXXXXXXXXXXXXXXXXXGNDTYVVDNADDIVTEAAGG------GTDSVQSSISLTLAANVENLTFTGS 382
BLAST of mRNA_P-wetherbeei_contig54451.1.1 vs. uniprot
Match: UPI001F3C5055 (calcium-binding protein n=2 Tax=Rhizobium fredii TaxID=380 RepID=UPI001F3C5055) HSP 1 Score: 70.5 bits (171), Expect = 1.900e-11 Identity = 71/128 (55.47%), Postives = 81/128 (63.28%), Query Frame = 1
Query: 28 YVIDNALDINKSRADAGVDDVLASVSYALGAHQENLTLAGIAALNATGNSLANTLRXXXXXXXXXXXXXXXXXXXXXXGDTLVYDSRDALLDGGLGKDTLLLTGHGVTLNATSLRMVTNIEVIDLRGN 411
YVIDNA D+ A G D V ASVS AL A ENLTL GIAALN TGNSLANTL XXXXXXXXXXXXXXXXXXXXX DT V D+ D ++ G G ++ SL + N+E + G+
Sbjct: 571 YVIDNAGDVVTEAAGGGTDTVQASVSLALAAEVENLTLTGIAALNGTGNSLANTLTXXXXXXXXXXXXXXXXXXXXXGNDTYVVDNADDIVTEAAGG------GTDSVQSSISLTLAANVENLTFTGS 692
BLAST of mRNA_P-wetherbeei_contig54451.1.1 vs. uniprot
Match: UPI001F551ACC (putative Ig domain-containing protein n=1 Tax=Anabaena cylindrica TaxID=1165 RepID=UPI001F551ACC) HSP 1 Score: 68.2 bits (165), Expect = 1.250e-10 Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = 1
Query: 19 NDDYVIDNALDINKSRADAGVDDVLASVSYALGAHQENLTLAGIAALNATGNSLANTL 192
ND+Y +DNALD+ + A G D VL+SVSY LG + ENLTL G AA+N TGN+ ANTL
Sbjct: 614 NDNYEVDNALDVVQEAAGEGTDSVLSSVSYTLGTNLENLTLTGAAAINGTGNASANTL 671
BLAST of mRNA_P-wetherbeei_contig54451.1.1 vs. uniprot
Match: K9ZQA6_ANACC (Proprotein convertase P n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) TaxID=272123 RepID=K9ZQA6_ANACC) HSP 1 Score: 68.2 bits (165), Expect = 1.260e-10 Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = 1
Query: 19 NDDYVIDNALDINKSRADAGVDDVLASVSYALGAHQENLTLAGIAALNATGNSLANTL 192
ND+Y +DNALD+ + A G D VL+SVSY LG + ENLTL G AA+N TGN+ ANTL
Sbjct: 2534 NDNYEVDNALDVVQEAAGEGTDSVLSSVSYTLGTNLENLTLTGAAAINGTGNASANTL 2591
BLAST of mRNA_P-wetherbeei_contig54451.1.1 vs. uniprot
Match: UPI00197FA244 (hypothetical protein n=1 Tax=Pseudomonas viridiflava TaxID=33069 RepID=UPI00197FA244) HSP 1 Score: 67.4 bits (163), Expect = 2.250e-10 Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = 1
Query: 22 DDYVIDNALDINKSRADAGVDDVLASVSYALGAHQENLTLAGIAALNATGNSLANTLR 195
D Y+++NA D AD G+D V +S+SY LGAH ENLTL G AA+N TGN+LANTLR
Sbjct: 1008 DRYIVENAGDRVMEMADGGLDQVDSSISYTLGAHVENLTLTGSAAINGTGNALANTLR 1065
BLAST of mRNA_P-wetherbeei_contig54451.1.1 vs. uniprot
Match: UPI0017804862 (calcium-binding protein n=1 Tax=Rhizobium sp. ARZ01 TaxID=2769313 RepID=UPI0017804862) HSP 1 Score: 66.6 bits (161), Expect = 3.890e-10 Identity = 35/64 (54.69%), Postives = 44/64 (68.75%), Query Frame = 1
Query: 1 LHGDAGNDDYVIDNALDINKSRADAGVDDVLASVSYALGAHQENLTLAGIAALNATGNSLANTL 192
+ G GND Y++DN D +A+ G+D V ASVSY L A+ ENLTLAG A +N TGN+LAN L
Sbjct: 340 MQGGKGNDTYIVDNLADTVAEKANEGIDLVQASVSYTLAANIENLTLAGAAKINGTGNTLANVL 403
BLAST of mRNA_P-wetherbeei_contig54451.1.1 vs. uniprot
Match: UPI0013EE69DB (calcium-binding protein n=1 Tax=Azospira oryzae TaxID=146939 RepID=UPI0013EE69DB) HSP 1 Score: 66.2 bits (160), Expect = 5.030e-10 Identity = 52/149 (34.90%), Postives = 70/149 (46.98%), Query Frame = 1
Query: 1 LHGDAGNDDYVIDNALDINKSRADAGVDDVLASVSYALGAHQENLTLAGIAALNATGNSLANTLRXXXXXXXXXXXXXXXXXXXXXXGDTLVYD--------SRDALLDGGL------GKDTLLLTG--HGVTLNATSLRMVTNIEVID 399
+ G GND Y +D+ D+ + G+D VL+S+SY LGA+ ENLTL G A L TGN L NT+ DT D S A+L + G DT++L G G+T NAT+L + NIE +D
Sbjct: 247 MSGGTGNDTYTVDDVSDVVTEAENEGIDTVLSSISYTLGANVENLTLTGTAHLTGTGNELKNTIIGNSGNNAIDGGGDIDILKGGKGNDTYTVDIVQSGSGASATAVLQDTVTELLNEGNDTVVLRGTVSGLT-NATTLLVGANIENLD 394
BLAST of mRNA_P-wetherbeei_contig54451.1.1 vs. uniprot
Match: UPI001CD842D4 (calcium-binding protein n=1 Tax=Novosphingobium sp. c7 TaxID=2866625 RepID=UPI001CD842D4) HSP 1 Score: 66.2 bits (160), Expect = 5.530e-10 Identity = 37/60 (61.67%), Postives = 42/60 (70.00%), Query Frame = 1
Query: 16 GNDDYVIDNALDINKSRADAGVDDVLASVSYALGAHQENLTLAGIAALNATGNSLANTLR 195
GND YV+DNA D A+ G D VLASVS+ LGA ENLTL G A+NATGN +AN LR
Sbjct: 480 GNDTYVVDNAADQVVEIANEGRDQVLASVSFVLGADVENLTLTGTGAINATGNGVANVLR 539
BLAST of mRNA_P-wetherbeei_contig54451.1.1 vs. uniprot
Match: UPI001F29375D (PA14 domain-containing protein n=1 Tax=Pelomonas sp. P8 TaxID=2906762 RepID=UPI001F29375D) HSP 1 Score: 66.2 bits (160), Expect = 5.930e-10 Identity = 73/130 (56.15%), Postives = 83/130 (63.85%), Query Frame = 1
Query: 22 DDYVIDNALDINKSRADAGVDDVLASVSYALGAHQENLTLAGIAALNATGNSLANTLRXXXXXXXXXXXXXXXXXXXXXXGDTLVY-DSRDALLDGGLGKDTLLLTGHGVTLNATSLRMVTNIEVIDLRG 408
D Y++DN D +A G D V ASVS+AL A+ ENLTL G A ++ATGNS AN + XXXXXXXXXXXXXXXXXXXXXX LV D A +DGG G D L L G GVT V IEV+D G
Sbjct: 1835 DTYIVDNVGDQLYEQAGGGTDTVNASVSWALAANFENLTLTGSANISATGNSAANIIXXXXXXXXXXXXXXXXXXXXXXXXXXLVVSDLNFASIDGGTGLDNLKLDGLGVTNVNQLTAKVRGIEVLDFFG 1964 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54451.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54451.1.1 >prot_P-wetherbeei_contig54451.1.1 ID=prot_P-wetherbeei_contig54451.1.1|Name=mRNA_P-wetherbeei_contig54451.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=137bp LHGDAGNDDYVIDNALDINKSRADAGVDDVLASVSYALGAHQENLTLAGIback to top mRNA from alignment at P-wetherbeei_contig54451:6..416+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54451.1.1 ID=mRNA_P-wetherbeei_contig54451.1.1|Name=mRNA_P-wetherbeei_contig54451.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig54451:6..416+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54451:6..416+ >mRNA_P-wetherbeei_contig54451.1.1 ID=mRNA_P-wetherbeei_contig54451.1.1|Name=mRNA_P-wetherbeei_contig54451.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig54451:6..416+ (Phaeothamnion wetherbeei SAG_119_79)back to top |