mRNA_P-wetherbeei_contig54389.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54389.1.1 vs. uniprot
Match: UPI0019979DB2 (Uncharacterized protein n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=UPI0019979DB2) HSP 1 Score: 93.6 bits (231), Expect = 1.880e-22 Identity = 46/57 (80.70%), Postives = 47/57 (82.46%), Query Frame = 1
Query: 1 TDPSVNILWVVMTTGTSSRFGISYKAGNYYEVLSDALIGATHELMTNPGFRKALTAK 171
TD ILW V T GTSSRFGISYKA NYYEVLSDALIGATHEL+ NPGFRKALT K
Sbjct: 144 TDADGKILWAVATGGTSSRFGISYKAANYYEVLSDALIGATHELVRNPGFRKALTQK 200
BLAST of mRNA_P-wetherbeei_contig54389.1.1 vs. uniprot
Match: UPI0019CE54D2 (Uncharacterized protein n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=UPI0019CE54D2) HSP 1 Score: 78.2 bits (191), Expect = 1.970e-16 Identity = 35/51 (68.63%), Postives = 42/51 (82.35%), Query Frame = 1
Query: 19 ILWVVMTTGTSSRFGISYKAGNYYEVLSDALIGATHELMTNPGFRKALTAK 171
ILW MT+G SSR+GI+YKA NYYEVLSDAL+GATHEL+ NP F++ L K
Sbjct: 155 ILWSFMTSGNSSRYGITYKADNYYEVLSDALVGATHELLRNPKFKEVLNRK 205
BLAST of mRNA_P-wetherbeei_contig54389.1.1 vs. uniprot
Match: A0A4R0YRK2_9GAMM (Uncharacterized protein n=1 Tax=Dyella soli TaxID=522319 RepID=A0A4R0YRK2_9GAMM) HSP 1 Score: 55.1 bits (131), Expect = 1.150e-7 Identity = 24/57 (42.11%), Postives = 38/57 (66.67%), Query Frame = 1
Query: 1 TDPSVNILWVVMTTGTSSRFGISYKAGNYYEVLSDALIGATHELMTNPGFRKALTAK 171
TD + +LW + G ++ FG SYKA NYYE LS+A++ ++ ++ +PGF AL A+
Sbjct: 140 TDAAGKVLWQGIAGGGATNFGRSYKADNYYETLSNAVLKTSNSMLNSPGFHHALEAR 196
BLAST of mRNA_P-wetherbeei_contig54389.1.1 vs. uniprot
Match: A0A6I1KDQ4_9DELT (Uncharacterized protein n=1 Tax=Geobacteraceae bacterium TaxID=2282154 RepID=A0A6I1KDQ4_9DELT) HSP 1 Score: 54.3 bits (129), Expect = 2.270e-7 Identity = 26/47 (55.32%), Postives = 32/47 (68.09%), Query Frame = 1
Query: 22 LWVVMTTGTSSRFGISYKAGNYYEVLSDALIGATHELMTNPGFRKAL 162
LW M +G+S RFG SYK NYYE LSDA + A H L+ + FRKA+
Sbjct: 147 LWQGMMSGSSRRFGRSYKPENYYETLSDAYLEAVHGLLKSEEFRKAV 193
BLAST of mRNA_P-wetherbeei_contig54389.1.1 vs. uniprot
Match: A0A8J8HL87_9BACT (Uncharacterized protein n=1 Tax=Geothrix sp. TaxID=1962974 RepID=A0A8J8HL87_9BACT) HSP 1 Score: 51.2 bits (121), Expect = 3.680e-6 Identity = 23/51 (45.10%), Postives = 35/51 (68.63%), Query Frame = 1
Query: 19 ILWVVMTTGTSSRFGISYKAGNYYEVLSDALIGATHELMTNPGFRKALTAK 171
+LW + G ++RFG SYKA NY+EVLSD+L+ A L+++ F +AL +
Sbjct: 151 VLWKGLAVGQATRFGRSYKAENYHEVLSDSLVEAVSHLLSDKTFLEALAGQ 201
BLAST of mRNA_P-wetherbeei_contig54389.1.1 vs. uniprot
Match: A0A154QZW9_9GAMM (Uncharacterized protein n=3 Tax=Rhodanobacter TaxID=75309 RepID=A0A154QZW9_9GAMM) HSP 1 Score: 50.8 bits (120), Expect = 4.450e-6 Identity = 23/51 (45.10%), Postives = 34/51 (66.67%), Query Frame = 1
Query: 10 SVNILWVVMTTGTSSRFGISYKAGNYYEVLSDALIGATHELMTNPGFRKAL 162
S +LW + G ++ FG SYKA NYYE LS+A++ ++ L+ +PGF AL
Sbjct: 142 SGKVLWQGIAGGGATNFGRSYKADNYYETLSNAVLKLSNSLLNSPGFHGAL 192
BLAST of mRNA_P-wetherbeei_contig54389.1.1 vs. uniprot
Match: UPI001959716C (hypothetical protein n=1 Tax=Dyella kyungheensis TaxID=1242174 RepID=UPI001959716C) HSP 1 Score: 50.8 bits (120), Expect = 4.450e-6 Identity = 22/51 (43.14%), Postives = 34/51 (66.67%), Query Frame = 1
Query: 10 SVNILWVVMTTGTSSRFGISYKAGNYYEVLSDALIGATHELMTNPGFRKAL 162
S +LW + G ++ FG SYKA NYYE LS+A++ ++ ++ +PGF AL
Sbjct: 142 SGKVLWQGIAGGGANNFGRSYKADNYYETLSNAVLKLSNSMLNSPGFHSAL 192
BLAST of mRNA_P-wetherbeei_contig54389.1.1 vs. uniprot
Match: A0A0G9H2E9_9GAMM (Uncharacterized protein n=1 Tax=Dyella japonica DSM 16301 TaxID=1440762 RepID=A0A0G9H2E9_9GAMM) HSP 1 Score: 50.4 bits (119), Expect = 6.200e-6 Identity = 22/56 (39.29%), Postives = 37/56 (66.07%), Query Frame = 1
Query: 1 TDPSVNILWVVMTTGTSSRFGISYKAGNYYEVLSDALIGATHELMTNPGFRKALTA 168
T+ + +LW + G ++ FG SYKA NYYE LS+A++ ++ ++ + GFR A+ A
Sbjct: 139 TNQAGKVLWQGVAGGGANNFGRSYKADNYYETLSNAVLKLSNSMLNSQGFRSAMLA 194
BLAST of mRNA_P-wetherbeei_contig54389.1.1 vs. uniprot
Match: A0A075K404_9GAMM (Uncharacterized protein n=4 Tax=Dyella TaxID=231454 RepID=A0A075K404_9GAMM) HSP 1 Score: 48.1 bits (113), Expect = 4.510e-5 Identity = 21/54 (38.89%), Postives = 35/54 (64.81%), Query Frame = 1
Query: 1 TDPSVNILWVVMTTGTSSRFGISYKAGNYYEVLSDALIGATHELMTNPGFRKAL 162
T+ + +LW + G ++ FG SYKA NYYE LS+A++ ++ ++ + GF AL
Sbjct: 139 TNATGKVLWQGVAGGGATNFGRSYKADNYYETLSNAVLKLSNSMLNSQGFHNAL 192 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54389.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54389.1.1 >prot_P-wetherbeei_contig54389.1.1 ID=prot_P-wetherbeei_contig54389.1.1|Name=mRNA_P-wetherbeei_contig54389.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=58bp TDPSVNILWVVMTTGTSSRFGISYKAGNYYEVLSDALIGATHELMTNPGFback to top mRNA from alignment at P-wetherbeei_contig54389:3..176+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54389.1.1 ID=mRNA_P-wetherbeei_contig54389.1.1|Name=mRNA_P-wetherbeei_contig54389.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=174bp|location=Sequence derived from alignment at P-wetherbeei_contig54389:3..176+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54389:3..176+ >mRNA_P-wetherbeei_contig54389.1.1 ID=mRNA_P-wetherbeei_contig54389.1.1|Name=mRNA_P-wetherbeei_contig54389.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=174bp|location=Sequence derived from alignment at P-wetherbeei_contig54389:3..176+ (Phaeothamnion wetherbeei SAG_119_79)back to top |