mRNA_P-wetherbeei_contig12419.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12419.1.1 vs. uniprot
Match: D7G3Y9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3Y9_ECTSI) HSP 1 Score: 235 bits (599), Expect = 1.250e-66 Identity = 125/256 (48.83%), Postives = 167/256 (65.23%), Query Frame = 1
Query: 1 RYVQDQMVWISNHQYAAAKRAGVLAPFAKFPGLVSRMLSALAAGRSAGRSNSXXXXXXXXXXXADVAVAAIALQRLAATVFQHLEGVAQRDPKYCHVVRLENYYFFSQSVGPQGAKCLENAVAQADAAFETATAAYLQWLASYQFPYLTQFFARIEDLVARCGAADVAFHENKKSLEAVLRKHGQEATIVEGLRATHARLVKHISRESGLLALLWDRLSDTLFAMFSRYEELCTVCYGHAMAPGASDVRRLASDVG 768
++++DQ+ WI Q AK+AG+LA AK P L+ R+ +A A R N+ A A QRL +F+H+E VA R+PKY H+VRLENY+FF+ ++ P + L V QAD E +T YL+WL YQFP LTQFFA++EDLV GAADV +HE K++LEA L++ G I EGL+ATH R+VKH+++E LL LW +LSDTLFAMFSRYEELCT+CY H + PGA V+R A+++G
Sbjct: 856 KFIKDQVSWIQA-QRGDAKKAGILAAVAKAPTLLKRLQAASNAAVVGTRGNAKAKEQDEGGE------AQKAYQRLVIALFEHVEEVASRNPKYEHMVRLENYHFFAATMRPLKVQVLSEYVEQADKLEEVSTTRYLEWLVGYQFPVLTQFFAKVEDLVMTVGAADVTYHEPKRNLEATLKRQGDMKVISEGLKATHQRMVKHVTKEGQLLGPLWAKLSDTLFAMFSRYEELCTLCYQHTLDPGAVAVKRAATEIG 1104
BLAST of mRNA_P-wetherbeei_contig12419.1.1 vs. uniprot
Match: A0A835YUC5_9STRA (Exocyst complex component Sec3-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUC5_9STRA) HSP 1 Score: 176 bits (445), Expect = 5.900e-46 Identity = 84/161 (52.17%), Postives = 115/161 (71.43%), Query Frame = 1
Query: 262 AQRDPKYCHVVRLENYYFFSQSVGPQGAKCLENAVAQADAAFETATAAYLQWLASYQFPYLTQFFARIEDLVARCGAADVAFHENKKSLEAVLRKHGQEATIVEGLRATHARLVKHISRESGLLALLWDRLSDTLFAMFSRYEELCTVCYGHAMAPGASDV 744
AQ +PKY +V+++EN YFF ++G + LE+ V QA + F+T + YL+W+ QFP+ FFARIE+LVA GA DV +HE KK+L+A+L++H E T+ +GL+ +AR+ KH+S+ES LL +LWD L+D LFA FSRYEELC VCYG M P AS V
Sbjct: 787 AQANPKYANVIKMENLYFFKHTIGLRDVPVLEDYVLQASSNFDTTSQNYLEWVLRCQFPHAMAFFARIEELVASVGAQDVPYHEPKKNLDAMLKRHLDEKTVPDGLKLIYARMNKHLSKESCLLPVLWDHLNDMLFAQFSRYEELCHVCYGFKMVPSASQV 947
BLAST of mRNA_P-wetherbeei_contig12419.1.1 vs. uniprot
Match: W7TS69_9STRA (Exocyst complex, component Exoc1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS69_9STRA) HSP 1 Score: 164 bits (416), Expect = 4.520e-42 Identity = 105/259 (40.54%), Postives = 142/259 (54.83%), Query Frame = 1
Query: 4 YVQDQMVWISNHQYAAAKRAGVLAPFAKFPGLVSRMLSALAAGRSAGRSNSXXXXXXXXXXXADVAVAAIALQRLAATVFQHLEGVAQR-DPKYCHVVRLENYYFFSQSVGPQ-----GAKCLENAVAQADAAFETATAAYLQWLASYQFPYLTQFFARIEDLVARCGAADVAFHENKKSLEAVLRKHGQEATIVEGLRATHARLVKHISRESGLLALLWDRLSDTLFAMFSRYEELCTVCYGHAMAPGASDVRRLASD 762
+V DQ VWI NHQ KRAGVLAPFAKFP V R+ ALA G + +A ALQ+L++++ LE ++ R D KY VVRLENY+FF Q++ P+ G+ L + + QA AA+E A Y W Y FP +T FF I+DL+ + G DV+ H K +L + ++ I + LR RL KHIS +SGL LWDR+S L+ F RYE++ CY + P A VR+LA +
Sbjct: 1039 FVADQEVWI-NHQNPDIKRAGVLAPFAKFPIFVDRL--ALAVGGQM------------------IGIAEAALQQLSSSLLAWLERLSLRGDQKYADVVRLENYHFFVQTMSPRQQCLIGSDVLVSFIDQAQAAYEAAVQRYASWSLGYAFPEVTAFFGSIDDLIVKVGVGDVSIHVPKTALFKLTQEACSRKAIADSLRTAFRRLRKHISDDSGLFLPLWDRISLLLYQRFVRYEDVILQCYDVKLEPPAILVRQLAQE 1276
BLAST of mRNA_P-wetherbeei_contig12419.1.1 vs. uniprot
Match: A0A7S2W0L8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W0L8_9STRA) HSP 1 Score: 127 bits (319), Expect = 6.490e-31 Identity = 83/265 (31.32%), Postives = 131/265 (49.43%), Query Frame = 1
Query: 4 YVQDQMVWI-SNHQYAA-AKRAGVLAPFAKFPGLVSRMLSALAAGRSAGRSNSXXXXXXXXXXXADVAVAAIALQRLAATVFQHLEGVAQRDP---KYC-HVVRLENYYFFSQSV---GPQGAKCLENAVAQADAAFETATAAYLQWLASYQFPYLTQFFARIEDLVARCGAADVAFHENKKSLEAVLRKHGQEATIVEGLRATHARLVKHISRESGLLALLWDRLSDTLFAMFSRYEELCTVCYGHAMAPGASDVRRLASDVGG 771
+V+DQ WI +NH KRAG++ FA+FP + ++ A R + + V + LQ++A +F L+ A+RD +Y +V+R+EN YFF+QS+ GP+ ++ A A +T+T +YL W+ +F L F+ I + G ADV H + + L+K + E ++ + R+ KH+S GLL + W L L+ F R+E+L T CY H + P A DV R+A GG
Sbjct: 17 WVEDQNKWIKTNHNVPLNGKRAGIITSFARFPSYLDHIMVCCKAARP----------ETYVPKLSAIKVTSYYLQKMAGALFASLQECAERDSTDQQYAANVMRMENSYFFTQSIKQRGPELITLFAKQISAASAICKTSTDSYLGWMIKREFKALHSLFSNISRIRRDVGDADVPIHVPRSTFVKTLQKESNRDVMKEKIQTIYGRMEKHLSEAGGLLPVAWKALVKVLYEWFGRWEKLSTQCYKHVLDPSAVDVVRIAKAAGG 271
BLAST of mRNA_P-wetherbeei_contig12419.1.1 vs. uniprot
Match: A0A7S2LNF4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LNF4_9STRA) HSP 1 Score: 115 bits (287), Expect = 3.050e-25 Identity = 78/260 (30.00%), Postives = 127/260 (48.85%), Query Frame = 1
Query: 4 YVQDQMVWISNHQYAA--AKRAGVLAPFAKFPGLVSRMLSALAAGRSAGRSNSXXXXXXXXXXXADVAVAAIALQRLAATVFQHLEGVAQR---DPKYC-HVVRLENYYFFSQSVGPQGAKC---LENAVAQADAAFETATAAYLQWLASYQFPYLTQFFARIEDLVARCGAADVAFHENKKSLEAVLRKHGQEATIVEGLRATHARLVKHISRESGLLALLWDRLSDTLFAMFSRYEELCTVCYGHAMAPGASDVRRLA 756
++++Q+ WI + KRAG+ A A+FP + +L AGRS + + A + V + LQ++A+ +F L A+R D +Y V+R+EN YFF+QS+ +G + + + A + +T AYL W+ +F + F+ I + G ADV H + ++K + + E + +AR+ KH+S GLL + W L L+ F R+E+L T CY + P A DV RLA
Sbjct: 266 WIEEQIKWIRTNPGVPQNGKRAGIFASVARFPSYLDHVLICCKAGRSQDYTPNL----------AKIKVVSYYLQKMASGLFASLNECAERETTDQQYAADVMRMENSYFFTQSIKQRGIELTSVFQKQITGASVICKQSTDAYLGWMIKREFKAMHSLFSNISRIRKDVGDADVPIHVPRAQFVRTIQKESSKEIMKEKIGVVYARMEKHLSDGGGLLPVAWKALVKVLYEWFGRWEKLSTSCYKFILEPSAIDVVRLA 515
BLAST of mRNA_P-wetherbeei_contig12419.1.1 vs. uniprot
Match: A0A6U3ZCN9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZCN9_9STRA) HSP 1 Score: 107 bits (266), Expect = 3.670e-24 Identity = 65/192 (33.85%), Postives = 98/192 (51.04%), Query Frame = 1
Query: 217 LQRLAATVFQHLEGVAQR---DPKYC-HVVRLENYYFFSQSV---GPQGAKCLENAVAQADAAFETATAAYLQWLASYQFPYLTQFFARIEDLVARCGAADVAFHENKKSLEAVLRKHGQEATIVEGLRATHARLVKHISRESGLLALLWDRLSDTLFAMFSRYEELCTVCYGHAMAPGASDVRRLASDVGG 771
LQ++A +F L+ A+R D +Y +V+R+EN YFF+QSV GP+ + A + + +T AYL W+ +F L F+ I + G ADV H + + L+K + E + +AR+ KH+S GLL + W L L+ F R+E+L T CY + P A DV R+A GG
Sbjct: 3 LQKMAGALFSSLQQCAERETTDKQYAANVMRMENSYFFTQSVKQRGPEMTTLFAKQITAASSICKQSTDAYLGWMIKREFKALHSLFSNISRIRRDVGDADVPIHVPRATFVKTLQKESNRDVMKEKIGIIYARMEKHLSEAGGLLPVAWKALVKVLYEWFGRWEKLSTQCYKFGLEPSAVDVVRIAKAAGG 194 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12419.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12419.1.1 >prot_P-wetherbeei_contig12419.1.1 ID=prot_P-wetherbeei_contig12419.1.1|Name=mRNA_P-wetherbeei_contig12419.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=287bp MVWISNHQYAAAKRAGVLAPFAKFPGLVSRMLSALAAGRSAGRSNSGGGGback to top mRNA from alignment at P-wetherbeei_contig12419:338..1498- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12419.1.1 ID=mRNA_P-wetherbeei_contig12419.1.1|Name=mRNA_P-wetherbeei_contig12419.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1161bp|location=Sequence derived from alignment at P-wetherbeei_contig12419:338..1498- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12419:338..1498- >mRNA_P-wetherbeei_contig12419.1.1 ID=mRNA_P-wetherbeei_contig12419.1.1|Name=mRNA_P-wetherbeei_contig12419.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=861bp|location=Sequence derived from alignment at P-wetherbeei_contig12419:338..1498- (Phaeothamnion wetherbeei SAG_119_79)back to top |