mRNA_P-wetherbeei_contig54013.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54013.1.1 vs. uniprot
Match: A0A450S405_9GAMM (WD40 repeat n=1 Tax=Candidatus Kentron sp. FW TaxID=2126338 RepID=A0A450S405_9GAMM) HSP 1 Score: 58.5 bits (140), Expect = 8.160e-7 Identity = 38/90 (42.22%), Postives = 51/90 (56.67%), Query Frame = 1
Query: 274 QRGSPAAVDILGGGSDVLLALAFSPDGRRLLETSTDGFARVWDLENAT-------LVTRFRIGSSGAFNEG------SAAFSPDGSPILT 504
Q + A + +L G SDV+L+LAFSPDG+RLL S DG AR+WDL A L T + G + G + AFSPDG+ ++T
Sbjct: 101 QAPADAPLRLLEGHSDVILSLAFSPDGQRLLSGSGDGTARLWDLSTALEAGVSTPLDTGLQTGKTLKILRGHEAPIYAVAFSPDGARLVT 190
BLAST of mRNA_P-wetherbeei_contig54013.1.1 vs. uniprot
Match: A0A0S8FCX7_9GAMM (P/Homo B domain-containing protein n=1 Tax=Gammaproteobacteria bacterium SG8_31 TaxID=1703405 RepID=A0A0S8FCX7_9GAMM) HSP 1 Score: 57.0 bits (136), Expect = 2.860e-6 Identity = 54/163 (33.13%), Postives = 69/163 (42.33%), Query Frame = 1
Query: 52 NRSILSLAFSPNGQFVLLGTTGARADVWSVTSGGGPAESYAFSDLSSKAVTEIAMSPDLSRIMMADEAGGIFGFQRGSPAAVDILG--GGSDVLLALAFSPDGRRLLETSTDGFARVWDLENATLV-TRFRIGSSGAFNEGSAAFSPDGSPILTRPPGAARLW 531
N +S AF G V+ G G A VW + G A +D A+SP + +I D G + P + D G + + ALA+SPDG RL+ DG +WD AT V RF GS GS A + D ILT ARLW
Sbjct: 989 NDKPVSRAFDAGGTRVVTGRGGTMARVWQI---GTERPLPAPADSRMAIARVFALSPVIDQITAGDLNGAVQFLDGSGPWSQDSERPPGHAGPITALAYSPDGSRLVSVGADGSVLLWDPMLATTVGERFHHGSGRV---GSVAIAADNRSILTGGELGARLW 1145
BLAST of mRNA_P-wetherbeei_contig54013.1.1 vs. uniprot
Match: A0A496B0Q7_9BACT (Uncharacterized protein n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A496B0Q7_9BACT) HSP 1 Score: 55.5 bits (132), Expect = 9.190e-6 Identity = 47/177 (26.55%), Postives = 73/177 (41.24%), Query Frame = 1
Query: 1 VWNIAESRRVRTITYDDNRSILSLAFSPNGQFVLLGTTGARADVWSVTSGGGPAESYAFSDLSSKAVTEIAMSPDLSRIMMADEAGGIFGFQRGSPAAVDILGGGSDVLLALAFSPDGRRLLETSTDGFARVWDLENATLVTRFRIGSSGAFNEGSAAFSPDGSPILTRPPGAARLW 531
+W++A+ + N + S A PNG+ +L VW + + + S+ + +P +I + G I+ + P L G +D ALAFSPDG+RL+ + D ARVWD+E + IG AFSP G+ I+ R W
Sbjct: 617 LWDVAKKGMQGNLF--KNEWVGSFAVLPNGR-ILASCASEEGSVWEIKQPDNSIAEFTVPEEPSQWARDAVFAPTGDQIAVGSRKGTIYVWNFEEPEHPIQLTGHTDHTWALAFSPDGKRLVSGADDNTARVWDIELGEEIAILSIGEP--CTPMGFAFSPCGALIVGGLNNEIRFW 788
BLAST of mRNA_P-wetherbeei_contig54013.1.1 vs. uniprot
Match: A0A495ZBI1_9BACT (Uncharacterized protein n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A495ZBI1_9BACT) HSP 1 Score: 54.7 bits (130), Expect = 1.180e-5 Identity = 41/118 (34.75%), Postives = 59/118 (50.00%), Query Frame = 1
Query: 184 LSSKAVTEIAMSPDLSRIMMADEAGG---IFGFQRGSPAAVDILGGGSDVLLALAFSPDGRRLLETSTDGFARVWDLENATLVTRFRIGSSGAFNEGSAAFSPDGSPILTRPPGAARL 528
L+ K +T+IA SPD SR+ AGG I+ + + A + +L G D + A+AF PD L S D R+WD + A + SS + + A SPDG P++ ARL
Sbjct: 23 LNKKQITDIAFSPDGSRLA----AGGDDRIWVYDLSNSAQIAMLAGHLDRVRAVAFGPDNHTLASASEDRTLRLWDTDTANEIATIAGESSSLVS--ALASSPDGVPLIAWNEETARL 134
BLAST of mRNA_P-wetherbeei_contig54013.1.1 vs. uniprot
Match: A0A0S8FP79_9GAMM (P/Homo B domain-containing protein n=1 Tax=Gammaproteobacteria bacterium SG8_31 TaxID=1703405 RepID=A0A0S8FP79_9GAMM) HSP 1 Score: 52.8 bits (125), Expect = 8.080e-5 Identity = 49/160 (30.63%), Postives = 71/160 (44.38%), Query Frame = 1
Query: 64 LSLAFSPNGQFVLLGTTGARADVWSVTSGGGPAESYAFSDLSSKAVTEI-AMSPDLSRIMMADEAGGIFGFQRGSP--AAVDILGGGSDVLLALAFSPDGRRLLETSTDGFARVWDLENATLV-TRFRIGSSGAFNEGSAAFSPDGSPILTRPPGAARLW 531
+S AF V+ G G+ A VW++ SG + ++ A T + A+SP ++ G + G P A + G + + ALA+SPDG R++ DG +WD AT V RF GS S A + D I+T ARLW
Sbjct: 994 VSRAFDTTNTRVVTGRGGSMARVWNLGSG----DEVPVTEEPGIAFTRVFALSPISDQVSAGGMDGSVHFLDSGGPWSQAPEGASGHAGPITALAYSPDGSRVVSVGADGSVLLWDPRAATTVGQRFHHGSGRVE---SVAVAADNRMIVTGGELGARLW 1146 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54013.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54013.1.1 >prot_P-wetherbeei_contig54013.1.1 ID=prot_P-wetherbeei_contig54013.1.1|Name=mRNA_P-wetherbeei_contig54013.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=177bp VWNIAESRRVRTITYDDNRSILSLAFSPNGQFVLLGTTGARADVWSVTSGback to top mRNA from alignment at P-wetherbeei_contig54013:3..533- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54013.1.1 ID=mRNA_P-wetherbeei_contig54013.1.1|Name=mRNA_P-wetherbeei_contig54013.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=531bp|location=Sequence derived from alignment at P-wetherbeei_contig54013:3..533- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54013:3..533- >mRNA_P-wetherbeei_contig54013.1.1 ID=mRNA_P-wetherbeei_contig54013.1.1|Name=mRNA_P-wetherbeei_contig54013.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=531bp|location=Sequence derived from alignment at P-wetherbeei_contig54013:3..533- (Phaeothamnion wetherbeei SAG_119_79)back to top |