mRNA_P-wetherbeei_contig536.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig536.2.1 vs. uniprot
Match: A0A836C9T6_9STRA (60S ribosomal protein L13 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9T6_9STRA) HSP 1 Score: 275 bits (704), Expect = 1.360e-91 Identity = 139/196 (70.92%), Postives = 163/196 (83.16%), Query Frame = 1
Query: 1 MVKHNNVTPNQHYHKQWATRVRTWFDQPAKKQARRLARKAKAAKIAPRPTQLLRPAVHCPTLKYNTKVRLGKGFTLEELKEAGVSRKLALTIGIAVDHRRQNKSVEAFETNVARLKAYKSKLIVFPRRSNQKPKAGDAKPEETAAAVQATGVVLPLAASAPAVSYAKVTPEMKEFKAYATLRTARTDVRMAGIRQK 588
MVKHNNV PN H+HK+W TRV+TWFDQP KK+ARR+ R AKAA +APRPTQLLRPAVHCPT+KYN KVRLG+GFTL ELKEAG+SRK+A TIGI+VDHRR N+S+ + NVARLK Y+SKLI+FPRRSN KPKAGDA P +TAAA Q TG V+PL + PAV++A VT EMK FKAY LR AR+D R+ GIR+K
Sbjct: 1 MVKHNNVIPNGHFHKKWQTRVKTWFDQPMKKKARRMRRAAKAAAVAPRPTQLLRPAVHCPTIKYNMKVRLGRGFTLAELKEAGISRKVARTIGISVDHRRTNRSLATMQNNVARLKEYQSKLIIFPRRSNAKPKAGDAAPGDTAAAAQVTGAVMPLTKAVPAVAFAAVTDEMKAFKAYEALRVARSDARLVGIRKK 196
BLAST of mRNA_P-wetherbeei_contig536.2.1 vs. uniprot
Match: D7G7K6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7K6_ECTSI) HSP 1 Score: 243 bits (620), Expect = 7.090e-79 Identity = 127/201 (63.18%), Postives = 154/201 (76.62%), Query Frame = 1
Query: 1 MVKHNNVTPNQHYHKQWATRVRTWFDQPAKKQARRLARKAKAAKIAPRPTQLLRPAVHCPTLKYNTKVRLGKGFTLEELKEAGVSRKLALTIGIAVDHRRQNKSVEAFETNVARLKAYKSKLIVFPRRSNQKPKAGDAKPEETAAAVQATGVVLPLAASAPAVSYAKVTPEMKEFKAYATLRTARTDVRMAGIRQKKKDGK 603
MVKHNNV PN H+HK+W RVRTWFDQPAKK+ARR AR+ KAAK+APRPTQLLRPAVHCPT+KYN+KVRLG+GF +EELKEAG+S+K ALTIGIAVDHRR NKS E+F NVARLK Y++ LI+FPR S PK GD+ EE AA Q TGV +PL + V + VT EM ++ R AR + ++AGIR ++K+ K
Sbjct: 1 MVKHNNVVPNGHFHKKWQRRVRTWFDQPAKKKARRQARQEKAAKMAPRPTQLLRPAVHCPTIKYNSKVRLGRGFNVEELKEAGISKKTALTIGIAVDHRRTNKSEESFAANVARLKEYRANLIIFPRGSKHLPKKGDSSLEEQKAATQVTGVTMPLVKADKPVEFLPVTAEMTATSLHSERRVARNEFKLAGIRIRQKEEK 201
BLAST of mRNA_P-wetherbeei_contig536.2.1 vs. uniprot
Match: A0A2D4BG90_PYTIN (60S ribosomal protein L13 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BG90_PYTIN) HSP 1 Score: 242 bits (618), Expect = 1.520e-78 Identity = 128/198 (64.65%), Postives = 153/198 (77.27%), Query Frame = 1
Query: 1 MVKHNNVTPNQHYHKQWATRVRTWFDQPAKKQARRLARKAKAAKIAPRPTQ-LLRPAVHCPTLKYNTKVRLGKGFTLEELKEAGVSRKLALTIGIAVDHRRQNKSVEAFETNVARLKAYKSKLIVFPRRSNQKPKAGDAKPEETAAAVQATGVVLPLAASAPAVSYAKVTPEMKEFKAYATLRTARTDVRMAGIRQKK 591
MVKHNNV PN H+HK W R++TWFDQ AKK+ARRL RK KAA IAPRP LLRPAVHCPT+KY +KVR GKGF+LEELKEAG+S+K AL+IGIAVD+RR NKSVE+ + NV RLKAYK+KL++FPR+SN KPK GD+ PEETA AVQ TG + P+A A +T EMK YA LR AR D R+AG ++K+
Sbjct: 1 MVKHNNVIPNGHFHKDWQRRIKTWFDQAAKKKARRLRRKEKAAAIAPRPAAGLLRPAVHCPTVKYASKVRAGKGFSLEELKEAGISKKQALSIGIAVDYRRTNKSVESLQANVQRLKAYKAKLVIFPRKSNNKPKHGDSTPEETANAVQVTGPIFPIARKTVKSESAVITEEMKNTSVYAQLRVARADARIAGKQKKR 198
BLAST of mRNA_P-wetherbeei_contig536.2.1 vs. uniprot
Match: K8Z7Z7_NANGC (Large subunit ribosomal protein L13e n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z7Z7_NANGC) HSP 1 Score: 241 bits (615), Expect = 4.360e-78 Identity = 126/197 (63.96%), Postives = 152/197 (77.16%), Query Frame = 1
Query: 1 MVKHNNVTPNQHYHKQWATRVRTWFDQPAKKQARRLARKAKAAKIAPRPTQLLRPAVHCPTLKYNTKVRLGKGFTLEELKEAGVSRKLALTIGIAVDHRRQNKSVEAFETNVARLKAYKSKLIVFPRRSNQKPKAGDAKPEETAAAVQATGVVLPLAASAPAVSYAKVTPEMKEFKAYATLRTARTDVRMAGIRQKK 591
MV+HNNV PNQH+HK W TRV+TWF QPAKK+ARRLARKAKAA +APRPTQLLRP VH PT +YN K RLG+GFT++ELKEAG+++K A ++GIAVDHRR N SVE+ + NV RLK YKSKLIVFP +KPKAGD+ E AAVQATG VLPL AV + V+ E+K F+A+ LR AR D ++ GIR+ K
Sbjct: 1 MVRHNNVIPNQHFHKDWQTRVKTWFVQPAKKKARRLARKAKAAALAPRPTQLLRPVVHAPTQRYNHKTRLGRGFTMQELKEAGLTKKYAKSVGIAVDHRRTNLSVESLQANVQRLKEYKSKLIVFPMGRVKKPKAGDSSTAECRAAVQATGTVLPLPTGKKAVEFVSVSEELKNFRAHTALRVARNDQKLDGIRRGK 197
BLAST of mRNA_P-wetherbeei_contig536.2.1 vs. uniprot
Match: H3G8S1_PHYRM (60S ribosomal protein L13 n=5 Tax=Peronosporaceae TaxID=4777 RepID=H3G8S1_PHYRM) HSP 1 Score: 241 bits (614), Expect = 6.180e-78 Identity = 128/198 (64.65%), Postives = 154/198 (77.78%), Query Frame = 1
Query: 1 MVKHNNVTPNQHYHKQWATRVRTWFDQPAKKQARRLARKAKAAKIAPRPTQ-LLRPAVHCPTLKYNTKVRLGKGFTLEELKEAGVSRKLALTIGIAVDHRRQNKSVEAFETNVARLKAYKSKLIVFPRRSNQKPKAGDAKPEETAAAVQATGVVLPLAASAPAVSYAKVTPEMKEFKAYATLRTARTDVRMAGIRQKK 591
MVKHNNV PN H+HK W +R++TWFDQ AKK+ RRLARKAKAA IAPRP LLRPAVHCPT+KY +KVR GKGFTLEELKEAG++RK A++IGIAVD RR NKSVE+ + NV RLKAYK+KL+VFPR+S KPK GD+ PEET AVQ TG +LP+ S+ + A +TPEMKE + LR AR D R+ G + K+
Sbjct: 1 MVKHNNVIPNGHFHKYWESRIKTWFDQAAKKKTRRLARKAKAAAIAPRPAAGLLRPAVHCPTIKYGSKVRAGKGFTLEELKEAGINRKQAISIGIAVDFRRTNKSVESLQANVHRLKAYKAKLVVFPRKSVNKPKNGDSSPEETKNAVQYTGAILPITRSSVKSTTAVITPEMKEKSVFTQLRVARADKRIFGKQAKR 198
BLAST of mRNA_P-wetherbeei_contig536.2.1 vs. uniprot
Match: A0A1V9ZEJ6_9STRA (60S ribosomal protein L13 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZEJ6_9STRA) HSP 1 Score: 240 bits (612), Expect = 1.290e-77 Identity = 126/198 (63.64%), Postives = 154/198 (77.78%), Query Frame = 1
Query: 1 MVKHNNVTPNQHYHKQWATRVRTWFDQPAKKQARRLARKAKAAKIAPRPTQ-LLRPAVHCPTLKYNTKVRLGKGFTLEELKEAGVSRKLALTIGIAVDHRRQNKSVEAFETNVARLKAYKSKLIVFPRRSNQKPKAGDAKPEETAAAVQATGVVLPLAASAPAVSYAKVTPEMKEFKAYATLRTARTDVRMAGIRQKK 591
MVKHNNV PN H+HK W R++TWFDQ +KK++RRL RKAKAA IAPRP LLRPAVHCPT+KY +KVR G+GFTL+ELKEAG+SRK ALTIGIAVD+RR NKSVE+ + NV RLK YKSKL+VFPR+ KPK GD+ EET AVQ TG +LP+A + ++ AK+T +MK+ TLR AR D R+ G+R+KK
Sbjct: 1 MVKHNNVIPNGHFHKDWQNRIKTWFDQASKKKSRRLTRKAKAAAIAPRPAAGLLRPAVHCPTVKYGSKVRAGRGFTLDELKEAGISRKQALTIGIAVDYRRTNKSVESLQANVQRLKTYKSKLVVFPRKRASKPKHGDSTLEETKNAVQHTGAILPIARVSKDIATAKITDDMKKTSVVNTLRLARADARLVGLRKKK 198
BLAST of mRNA_P-wetherbeei_contig536.2.1 vs. uniprot
Match: A0A1V9ZTH1_9STRA (60S ribosomal protein L13 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZTH1_9STRA) HSP 1 Score: 240 bits (612), Expect = 1.290e-77 Identity = 127/198 (64.14%), Postives = 152/198 (76.77%), Query Frame = 1
Query: 1 MVKHNNVTPNQHYHKQWATRVRTWFDQPAKKQARRLARKAKAAKIAPRPTQ-LLRPAVHCPTLKYNTKVRLGKGFTLEELKEAGVSRKLALTIGIAVDHRRQNKSVEAFETNVARLKAYKSKLIVFPRRSNQKPKAGDAKPEETAAAVQATGVVLPLAASAPAVSYAKVTPEMKEFKAYATLRTARTDVRMAGIRQKK 591
MVKHNNV PN H+HK W R++TWFDQ AKK++RRL RKAKAA IAPRP LLRPAVHCPT+KY +KVR G+GFTL+ELKEAG+SRK ALTIGIAVD+RR NKSVE+ + NV RLKAYKSKL+VFPR+ KPK GDA EE + VQ G + P+A ++ V+ AK+T EMK TLR AR D R+ G+R+KK
Sbjct: 1 MVKHNNVIPNGHFHKDWQNRIKTWFDQAAKKKSRRLTRKAKAAAIAPRPAAGLLRPAVHCPTVKYGSKVRAGRGFTLDELKEAGISRKQALTIGIAVDYRRTNKSVESLQANVQRLKAYKSKLVVFPRKRISKPKNGDASAEELKSVVQHKGALFPIARASTEVATAKITEEMKNDSVVKTLRLARADARLVGLRKKK 198
BLAST of mRNA_P-wetherbeei_contig536.2.1 vs. uniprot
Match: A0A024TY88_9STRA (60S ribosomal protein L13 n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024TY88_9STRA) HSP 1 Score: 239 bits (609), Expect = 3.560e-77 Identity = 125/201 (62.19%), Postives = 153/201 (76.12%), Query Frame = 1
Query: 4 VKHNNVTPNQHYHKQWATRVRTWFDQPAKKQARRLARKAKAAKIAPRPTQ-LLRPAVHCPTLKYNTKVRLGKGFTLEELKEAGVSRKLALTIGIAVDHRRQNKSVEAFETNVARLKAYKSKLIVFPRRSNQKPKAGDAKPEETAAAVQATGVVLPLAASAPAVSYAKVTPEMKEFKAYATLRTARTDVRMAGIRQKKKDGK 603
+KHNNV PN H+HK W R++TWFDQ +KK++RRL RKAKAA IAPRP LLRPAVHCPT+KY +KVR G+GFTL+ELKEAG+SRK ALTIG++VD+RR NKSVE+ + NV RLK YKSKL++FPR+ KPKAGD+K EET A Q G VLP+A + V AK+T E+K TLR AR D R+ G+R+KK D K
Sbjct: 1 MKHNNVIPNGHFHKDWQNRIKTWFDQASKKKSRRLTRKAKAAAIAPRPAAGLLRPAVHCPTIKYGSKVRAGRGFTLDELKEAGISRKQALTIGVSVDYRRTNKSVESLQANVQRLKTYKSKLVLFPRKRASKPKAGDSKVEETKNATQLIGAVLPIARPSKEVPTAKITEELKNNSVVKTLRLARADARLVGLRKKKADEK 201
BLAST of mRNA_P-wetherbeei_contig536.2.1 vs. uniprot
Match: A0A7S2UYA0_9STRA (60S ribosomal protein L13 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYA0_9STRA) HSP 1 Score: 237 bits (605), Expect = 1.350e-76 Identity = 124/195 (63.59%), Postives = 154/195 (78.97%), Query Frame = 1
Query: 1 MVKHNNVTPNQHYHKQWATRVRTWFDQPAKKQARRLARKAKAAKIAPRPTQ-LLRPAVHCPTLKYNTKVRLGKGFTLEELKEAGVSRKLALTIGIAVDHRRQNKSVEAFETNVARLKAYKSKLIVFPRRSNQKPKAGDAKPEETAAAVQATGVVLPLAASAPAVSYAKVTPEMKEFKAYATLRTARTDVRMAGIR 582
MVKHNNV PN H HK+W RV+TWFDQPAKK+ RRLARKAKAAK+APRP LLRP VHC T KY++K RLG+GF+L ELKEAG+ +K+A TIGIAVDHRR NKSVEA + N+ARL +K++L+VFPR+SNQKPK GD+ PEET+ A Q TG +LP+ + + A VT EMK FKA+ +LR A++D R+ G+R
Sbjct: 1 MVKHNNVVPNVHCHKKWQRRVKTWFDQPAKKKNRRLARKAKAAKLAPRPVSGLLRPVVHCSTQKYSSKTRLGRGFSLAELKEAGIPKKVARTIGIAVDHRRTNKSVEAMQANIARLAEFKARLVVFPRKSNQKPKNGDSAPEETSQATQLTGPILPIVKT-DELETAAVTDEMKNFKAFTSLRLAKSDARVLGLR 194
BLAST of mRNA_P-wetherbeei_contig536.2.1 vs. uniprot
Match: A0A7R9WAC9_9STRA (60S ribosomal protein L13 n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WAC9_9STRA) HSP 1 Score: 237 bits (605), Expect = 1.490e-76 Identity = 126/198 (63.64%), Postives = 149/198 (75.25%), Query Frame = 1
Query: 1 MVKHNNVTPNQHYHKQWATRVRTWFDQPAKKQARRLARKAKAAKIAPRPTQ-LLRPAVHCPTLKYNTKVRLGKGFTLEELKEAGVSRKLALTIGIAVDHRRQNKSVEAFETNVARLKAYKSKLIVFPRRSNQKPKAGDAKPEETAAAVQATGVVLPLAASAPAVSYAKVTPEMKEFKAYATLRTARTDVRMAGIRQKK 591
MVKHNNV PNQH+HKQW RV+TWFDQPAKK+ARR ARKAKAA IAPRP LLRPAV CPT +YNTKVR G+GFTLEELK AG+S+++A TIGIAVDHRR NKS + NV RL AYK+KL+VFPR SN KPK GDA EET+AA Q TG + P+ A + + +T ++K AY TLR R + RM G+R K+
Sbjct: 1 MVKHNNVVPNQHFHKQWQNRVKTWFDQPAKKKARRAARKAKAAAIAPRPAAGLLRPAVRCPTQRYNTKVRAGRGFTLEELKTAGISKRVARTIGIAVDHRRSNKSTATLQENVQRLNAYKAKLVVFPRGSNAKPKTGDASVEETSAATQLTGPLFPITAKPVSTEFVALTDDLKAKNAYRTLRIERCNRRMNGLRIKR 198 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig536.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig536.2.1 >prot_P-wetherbeei_contig536.2.1 ID=prot_P-wetherbeei_contig536.2.1|Name=mRNA_P-wetherbeei_contig536.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=201bp MVKHNNVTPNQHYHKQWATRVRTWFDQPAKKQARRLARKAKAAKIAPRPTback to top mRNA from alignment at P-wetherbeei_contig536:3816..5580+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig536.2.1 ID=mRNA_P-wetherbeei_contig536.2.1|Name=mRNA_P-wetherbeei_contig536.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1765bp|location=Sequence derived from alignment at P-wetherbeei_contig536:3816..5580+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig536:3816..5580+ >mRNA_P-wetherbeei_contig536.2.1 ID=mRNA_P-wetherbeei_contig536.2.1|Name=mRNA_P-wetherbeei_contig536.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=603bp|location=Sequence derived from alignment at P-wetherbeei_contig536:3816..5580+ (Phaeothamnion wetherbeei SAG_119_79)back to top |