mRNA_P-wetherbeei_contig536.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig536.2.1
Unique NamemRNA_P-wetherbeei_contig536.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig536.2.1 vs. uniprot
Match: A0A836C9T6_9STRA (60S ribosomal protein L13 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9T6_9STRA)

HSP 1 Score: 275 bits (704), Expect = 1.360e-91
Identity = 139/196 (70.92%), Postives = 163/196 (83.16%), Query Frame = 1
Query:    1 MVKHNNVTPNQHYHKQWATRVRTWFDQPAKKQARRLARKAKAAKIAPRPTQLLRPAVHCPTLKYNTKVRLGKGFTLEELKEAGVSRKLALTIGIAVDHRRQNKSVEAFETNVARLKAYKSKLIVFPRRSNQKPKAGDAKPEETAAAVQATGVVLPLAASAPAVSYAKVTPEMKEFKAYATLRTARTDVRMAGIRQK 588
            MVKHNNV PN H+HK+W TRV+TWFDQP KK+ARR+ R AKAA +APRPTQLLRPAVHCPT+KYN KVRLG+GFTL ELKEAG+SRK+A TIGI+VDHRR N+S+   + NVARLK Y+SKLI+FPRRSN KPKAGDA P +TAAA Q TG V+PL  + PAV++A VT EMK FKAY  LR AR+D R+ GIR+K
Sbjct:    1 MVKHNNVIPNGHFHKKWQTRVKTWFDQPMKKKARRMRRAAKAAAVAPRPTQLLRPAVHCPTIKYNMKVRLGRGFTLAELKEAGISRKVARTIGISVDHRRTNRSLATMQNNVARLKEYQSKLIIFPRRSNAKPKAGDAAPGDTAAAAQVTGAVMPLTKAVPAVAFAAVTDEMKAFKAYEALRVARSDARLVGIRKK 196          
BLAST of mRNA_P-wetherbeei_contig536.2.1 vs. uniprot
Match: D7G7K6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7K6_ECTSI)

HSP 1 Score: 243 bits (620), Expect = 7.090e-79
Identity = 127/201 (63.18%), Postives = 154/201 (76.62%), Query Frame = 1
Query:    1 MVKHNNVTPNQHYHKQWATRVRTWFDQPAKKQARRLARKAKAAKIAPRPTQLLRPAVHCPTLKYNTKVRLGKGFTLEELKEAGVSRKLALTIGIAVDHRRQNKSVEAFETNVARLKAYKSKLIVFPRRSNQKPKAGDAKPEETAAAVQATGVVLPLAASAPAVSYAKVTPEMKEFKAYATLRTARTDVRMAGIRQKKKDGK 603
            MVKHNNV PN H+HK+W  RVRTWFDQPAKK+ARR AR+ KAAK+APRPTQLLRPAVHCPT+KYN+KVRLG+GF +EELKEAG+S+K ALTIGIAVDHRR NKS E+F  NVARLK Y++ LI+FPR S   PK GD+  EE  AA Q TGV +PL  +   V +  VT EM     ++  R AR + ++AGIR ++K+ K
Sbjct:    1 MVKHNNVVPNGHFHKKWQRRVRTWFDQPAKKKARRQARQEKAAKMAPRPTQLLRPAVHCPTIKYNSKVRLGRGFNVEELKEAGISKKTALTIGIAVDHRRTNKSEESFAANVARLKEYRANLIIFPRGSKHLPKKGDSSLEEQKAATQVTGVTMPLVKADKPVEFLPVTAEMTATSLHSERRVARNEFKLAGIRIRQKEEK 201          
BLAST of mRNA_P-wetherbeei_contig536.2.1 vs. uniprot
Match: A0A2D4BG90_PYTIN (60S ribosomal protein L13 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BG90_PYTIN)

HSP 1 Score: 242 bits (618), Expect = 1.520e-78
Identity = 128/198 (64.65%), Postives = 153/198 (77.27%), Query Frame = 1
Query:    1 MVKHNNVTPNQHYHKQWATRVRTWFDQPAKKQARRLARKAKAAKIAPRPTQ-LLRPAVHCPTLKYNTKVRLGKGFTLEELKEAGVSRKLALTIGIAVDHRRQNKSVEAFETNVARLKAYKSKLIVFPRRSNQKPKAGDAKPEETAAAVQATGVVLPLAASAPAVSYAKVTPEMKEFKAYATLRTARTDVRMAGIRQKK 591
            MVKHNNV PN H+HK W  R++TWFDQ AKK+ARRL RK KAA IAPRP   LLRPAVHCPT+KY +KVR GKGF+LEELKEAG+S+K AL+IGIAVD+RR NKSVE+ + NV RLKAYK+KL++FPR+SN KPK GD+ PEETA AVQ TG + P+A        A +T EMK    YA LR AR D R+AG ++K+
Sbjct:    1 MVKHNNVIPNGHFHKDWQRRIKTWFDQAAKKKARRLRRKEKAAAIAPRPAAGLLRPAVHCPTVKYASKVRAGKGFSLEELKEAGISKKQALSIGIAVDYRRTNKSVESLQANVQRLKAYKAKLVIFPRKSNNKPKHGDSTPEETANAVQVTGPIFPIARKTVKSESAVITEEMKNTSVYAQLRVARADARIAGKQKKR 198          
BLAST of mRNA_P-wetherbeei_contig536.2.1 vs. uniprot
Match: K8Z7Z7_NANGC (Large subunit ribosomal protein L13e n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z7Z7_NANGC)

HSP 1 Score: 241 bits (615), Expect = 4.360e-78
Identity = 126/197 (63.96%), Postives = 152/197 (77.16%), Query Frame = 1
Query:    1 MVKHNNVTPNQHYHKQWATRVRTWFDQPAKKQARRLARKAKAAKIAPRPTQLLRPAVHCPTLKYNTKVRLGKGFTLEELKEAGVSRKLALTIGIAVDHRRQNKSVEAFETNVARLKAYKSKLIVFPRRSNQKPKAGDAKPEETAAAVQATGVVLPLAASAPAVSYAKVTPEMKEFKAYATLRTARTDVRMAGIRQKK 591
            MV+HNNV PNQH+HK W TRV+TWF QPAKK+ARRLARKAKAA +APRPTQLLRP VH PT +YN K RLG+GFT++ELKEAG+++K A ++GIAVDHRR N SVE+ + NV RLK YKSKLIVFP    +KPKAGD+   E  AAVQATG VLPL     AV +  V+ E+K F+A+  LR AR D ++ GIR+ K
Sbjct:    1 MVRHNNVIPNQHFHKDWQTRVKTWFVQPAKKKARRLARKAKAAALAPRPTQLLRPVVHAPTQRYNHKTRLGRGFTMQELKEAGLTKKYAKSVGIAVDHRRTNLSVESLQANVQRLKEYKSKLIVFPMGRVKKPKAGDSSTAECRAAVQATGTVLPLPTGKKAVEFVSVSEELKNFRAHTALRVARNDQKLDGIRRGK 197          
BLAST of mRNA_P-wetherbeei_contig536.2.1 vs. uniprot
Match: H3G8S1_PHYRM (60S ribosomal protein L13 n=5 Tax=Peronosporaceae TaxID=4777 RepID=H3G8S1_PHYRM)

HSP 1 Score: 241 bits (614), Expect = 6.180e-78
Identity = 128/198 (64.65%), Postives = 154/198 (77.78%), Query Frame = 1
Query:    1 MVKHNNVTPNQHYHKQWATRVRTWFDQPAKKQARRLARKAKAAKIAPRPTQ-LLRPAVHCPTLKYNTKVRLGKGFTLEELKEAGVSRKLALTIGIAVDHRRQNKSVEAFETNVARLKAYKSKLIVFPRRSNQKPKAGDAKPEETAAAVQATGVVLPLAASAPAVSYAKVTPEMKEFKAYATLRTARTDVRMAGIRQKK 591
            MVKHNNV PN H+HK W +R++TWFDQ AKK+ RRLARKAKAA IAPRP   LLRPAVHCPT+KY +KVR GKGFTLEELKEAG++RK A++IGIAVD RR NKSVE+ + NV RLKAYK+KL+VFPR+S  KPK GD+ PEET  AVQ TG +LP+  S+   + A +TPEMKE   +  LR AR D R+ G + K+
Sbjct:    1 MVKHNNVIPNGHFHKYWESRIKTWFDQAAKKKTRRLARKAKAAAIAPRPAAGLLRPAVHCPTIKYGSKVRAGKGFTLEELKEAGINRKQAISIGIAVDFRRTNKSVESLQANVHRLKAYKAKLVVFPRKSVNKPKNGDSSPEETKNAVQYTGAILPITRSSVKSTTAVITPEMKEKSVFTQLRVARADKRIFGKQAKR 198          
BLAST of mRNA_P-wetherbeei_contig536.2.1 vs. uniprot
Match: A0A1V9ZEJ6_9STRA (60S ribosomal protein L13 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZEJ6_9STRA)

HSP 1 Score: 240 bits (612), Expect = 1.290e-77
Identity = 126/198 (63.64%), Postives = 154/198 (77.78%), Query Frame = 1
Query:    1 MVKHNNVTPNQHYHKQWATRVRTWFDQPAKKQARRLARKAKAAKIAPRPTQ-LLRPAVHCPTLKYNTKVRLGKGFTLEELKEAGVSRKLALTIGIAVDHRRQNKSVEAFETNVARLKAYKSKLIVFPRRSNQKPKAGDAKPEETAAAVQATGVVLPLAASAPAVSYAKVTPEMKEFKAYATLRTARTDVRMAGIRQKK 591
            MVKHNNV PN H+HK W  R++TWFDQ +KK++RRL RKAKAA IAPRP   LLRPAVHCPT+KY +KVR G+GFTL+ELKEAG+SRK ALTIGIAVD+RR NKSVE+ + NV RLK YKSKL+VFPR+   KPK GD+  EET  AVQ TG +LP+A  +  ++ AK+T +MK+     TLR AR D R+ G+R+KK
Sbjct:    1 MVKHNNVIPNGHFHKDWQNRIKTWFDQASKKKSRRLTRKAKAAAIAPRPAAGLLRPAVHCPTVKYGSKVRAGRGFTLDELKEAGISRKQALTIGIAVDYRRTNKSVESLQANVQRLKTYKSKLVVFPRKRASKPKHGDSTLEETKNAVQHTGAILPIARVSKDIATAKITDDMKKTSVVNTLRLARADARLVGLRKKK 198          
BLAST of mRNA_P-wetherbeei_contig536.2.1 vs. uniprot
Match: A0A1V9ZTH1_9STRA (60S ribosomal protein L13 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZTH1_9STRA)

HSP 1 Score: 240 bits (612), Expect = 1.290e-77
Identity = 127/198 (64.14%), Postives = 152/198 (76.77%), Query Frame = 1
Query:    1 MVKHNNVTPNQHYHKQWATRVRTWFDQPAKKQARRLARKAKAAKIAPRPTQ-LLRPAVHCPTLKYNTKVRLGKGFTLEELKEAGVSRKLALTIGIAVDHRRQNKSVEAFETNVARLKAYKSKLIVFPRRSNQKPKAGDAKPEETAAAVQATGVVLPLAASAPAVSYAKVTPEMKEFKAYATLRTARTDVRMAGIRQKK 591
            MVKHNNV PN H+HK W  R++TWFDQ AKK++RRL RKAKAA IAPRP   LLRPAVHCPT+KY +KVR G+GFTL+ELKEAG+SRK ALTIGIAVD+RR NKSVE+ + NV RLKAYKSKL+VFPR+   KPK GDA  EE  + VQ  G + P+A ++  V+ AK+T EMK      TLR AR D R+ G+R+KK
Sbjct:    1 MVKHNNVIPNGHFHKDWQNRIKTWFDQAAKKKSRRLTRKAKAAAIAPRPAAGLLRPAVHCPTVKYGSKVRAGRGFTLDELKEAGISRKQALTIGIAVDYRRTNKSVESLQANVQRLKAYKSKLVVFPRKRISKPKNGDASAEELKSVVQHKGALFPIARASTEVATAKITEEMKNDSVVKTLRLARADARLVGLRKKK 198          
BLAST of mRNA_P-wetherbeei_contig536.2.1 vs. uniprot
Match: A0A024TY88_9STRA (60S ribosomal protein L13 n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024TY88_9STRA)

HSP 1 Score: 239 bits (609), Expect = 3.560e-77
Identity = 125/201 (62.19%), Postives = 153/201 (76.12%), Query Frame = 1
Query:    4 VKHNNVTPNQHYHKQWATRVRTWFDQPAKKQARRLARKAKAAKIAPRPTQ-LLRPAVHCPTLKYNTKVRLGKGFTLEELKEAGVSRKLALTIGIAVDHRRQNKSVEAFETNVARLKAYKSKLIVFPRRSNQKPKAGDAKPEETAAAVQATGVVLPLAASAPAVSYAKVTPEMKEFKAYATLRTARTDVRMAGIRQKKKDGK 603
            +KHNNV PN H+HK W  R++TWFDQ +KK++RRL RKAKAA IAPRP   LLRPAVHCPT+KY +KVR G+GFTL+ELKEAG+SRK ALTIG++VD+RR NKSVE+ + NV RLK YKSKL++FPR+   KPKAGD+K EET  A Q  G VLP+A  +  V  AK+T E+K      TLR AR D R+ G+R+KK D K
Sbjct:    1 MKHNNVIPNGHFHKDWQNRIKTWFDQASKKKSRRLTRKAKAAAIAPRPAAGLLRPAVHCPTIKYGSKVRAGRGFTLDELKEAGISRKQALTIGVSVDYRRTNKSVESLQANVQRLKTYKSKLVLFPRKRASKPKAGDSKVEETKNATQLIGAVLPIARPSKEVPTAKITEELKNNSVVKTLRLARADARLVGLRKKKADEK 201          
BLAST of mRNA_P-wetherbeei_contig536.2.1 vs. uniprot
Match: A0A7S2UYA0_9STRA (60S ribosomal protein L13 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYA0_9STRA)

HSP 1 Score: 237 bits (605), Expect = 1.350e-76
Identity = 124/195 (63.59%), Postives = 154/195 (78.97%), Query Frame = 1
Query:    1 MVKHNNVTPNQHYHKQWATRVRTWFDQPAKKQARRLARKAKAAKIAPRPTQ-LLRPAVHCPTLKYNTKVRLGKGFTLEELKEAGVSRKLALTIGIAVDHRRQNKSVEAFETNVARLKAYKSKLIVFPRRSNQKPKAGDAKPEETAAAVQATGVVLPLAASAPAVSYAKVTPEMKEFKAYATLRTARTDVRMAGIR 582
            MVKHNNV PN H HK+W  RV+TWFDQPAKK+ RRLARKAKAAK+APRP   LLRP VHC T KY++K RLG+GF+L ELKEAG+ +K+A TIGIAVDHRR NKSVEA + N+ARL  +K++L+VFPR+SNQKPK GD+ PEET+ A Q TG +LP+  +   +  A VT EMK FKA+ +LR A++D R+ G+R
Sbjct:    1 MVKHNNVVPNVHCHKKWQRRVKTWFDQPAKKKNRRLARKAKAAKLAPRPVSGLLRPVVHCSTQKYSSKTRLGRGFSLAELKEAGIPKKVARTIGIAVDHRRTNKSVEAMQANIARLAEFKARLVVFPRKSNQKPKNGDSAPEETSQATQLTGPILPIVKT-DELETAAVTDEMKNFKAFTSLRLAKSDARVLGLR 194          
BLAST of mRNA_P-wetherbeei_contig536.2.1 vs. uniprot
Match: A0A7R9WAC9_9STRA (60S ribosomal protein L13 n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WAC9_9STRA)

HSP 1 Score: 237 bits (605), Expect = 1.490e-76
Identity = 126/198 (63.64%), Postives = 149/198 (75.25%), Query Frame = 1
Query:    1 MVKHNNVTPNQHYHKQWATRVRTWFDQPAKKQARRLARKAKAAKIAPRPTQ-LLRPAVHCPTLKYNTKVRLGKGFTLEELKEAGVSRKLALTIGIAVDHRRQNKSVEAFETNVARLKAYKSKLIVFPRRSNQKPKAGDAKPEETAAAVQATGVVLPLAASAPAVSYAKVTPEMKEFKAYATLRTARTDVRMAGIRQKK 591
            MVKHNNV PNQH+HKQW  RV+TWFDQPAKK+ARR ARKAKAA IAPRP   LLRPAV CPT +YNTKVR G+GFTLEELK AG+S+++A TIGIAVDHRR NKS    + NV RL AYK+KL+VFPR SN KPK GDA  EET+AA Q TG + P+ A   +  +  +T ++K   AY TLR  R + RM G+R K+
Sbjct:    1 MVKHNNVVPNQHFHKQWQNRVKTWFDQPAKKKARRAARKAKAAAIAPRPAAGLLRPAVRCPTQRYNTKVRAGRGFTLEELKTAGISKRVARTIGIAVDHRRSNKSTATLQENVQRLNAYKAKLVVFPRGSNAKPKTGDASVEETSAATQLTGPLFPITAKPVSTEFVALTDDLKAKNAYRTLRIERCNRRMNGLRIKR 198          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig536.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C9T6_9STRA1.360e-9170.9260S ribosomal protein L13 n=2 Tax=Tribonema minus ... [more]
D7G7K6_ECTSI7.090e-7963.18Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A2D4BG90_PYTIN1.520e-7864.6560S ribosomal protein L13 n=1 Tax=Pythium insidios... [more]
K8Z7Z7_NANGC4.360e-7863.96Large subunit ribosomal protein L13e n=3 Tax=Monod... [more]
H3G8S1_PHYRM6.180e-7864.6560S ribosomal protein L13 n=5 Tax=Peronosporaceae ... [more]
A0A1V9ZEJ6_9STRA1.290e-7763.6460S ribosomal protein L13 n=1 Tax=Thraustotheca cl... [more]
A0A1V9ZTH1_9STRA1.290e-7764.1460S ribosomal protein L13 n=3 Tax=Saprolegniaceae ... [more]
A0A024TY88_9STRA3.560e-7762.1960S ribosomal protein L13 n=4 Tax=Aphanomyces TaxI... [more]
A0A7S2UYA0_9STRA1.350e-7663.5960S ribosomal protein L13 n=1 Tax=Fibrocapsa japon... [more]
A0A7R9WAC9_9STRA1.490e-7663.6460S ribosomal protein L13 n=1 Tax=Pseudictyota dub... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig536contigP-wetherbeei_contig536:3816..5580 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G7K6
Preferred nameRPL13
PFAMsRibosomal_L13e
Model size603
Max annot lvl2759|Eukaryota
KEGG koko:K02873,ko:K10755
KEGG Pathwayko03010,ko03030,ko03420,ko03430,map03010,map03030,map03420,map03430
KEGG ModuleM00177,M00179,M00289,M00295
Hectar predicted targeting categoryother localisation
GOsGO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0005911,GO:0006412,GO:0006518,GO:0006807,GO:0006914,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009506,GO:0009719,GO:0009725,GO:0009735,GO:0009986,GO:0009987,GO:0010033,GO:0010467,GO:0015934,GO:0016020,GO:0016236,GO:0019538,GO:0022625,GO:0022626,GO:0030054,GO:0030312,GO:0031090,GO:0031974,GO:0031981,GO:0032991,GO:0034641,GO:0034645,GO:0042221,GO:0042788,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0055044,GO:0061919,GO:0070013,GO:0071704,GO:0071944,GO:0097159,GO:0098588,GO:0098805,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
Exons4
Evalue1.16e-79
EggNOG OGsCOG4352@1|root,KOG3295@2759|Eukaryota
Ec32 ortholog descriptionRibosomal protein L13e
Ec32 orthologEc-22_002060.1
Descriptionstructural constituent of ribosome
Cds size603
COG categoryJ
BRITEbr01610,ko00000,ko00001,ko00002,ko03011,ko03032,ko03036,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186801.4935663-CDS-P-wetherbeei_contig536:3815..40041683186801.4935663-CDS-P-wetherbeei_contig536:3815..4004Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig536 3816..4004 +
1683186801.5228949-CDS-P-wetherbeei_contig536:4450..45011683186801.5228949-CDS-P-wetherbeei_contig536:4450..4501Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig536 4451..4501 +
1683186801.542788-CDS-P-wetherbeei_contig536:4704..47761683186801.542788-CDS-P-wetherbeei_contig536:4704..4776Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig536 4705..4776 +
1683186801.5546992-CDS-P-wetherbeei_contig536:5289..55801683186801.5546992-CDS-P-wetherbeei_contig536:5289..5580Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig536 5290..5580 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig536.2.1prot_P-wetherbeei_contig536.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig536 3816..5580 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig536.2.1

>prot_P-wetherbeei_contig536.2.1 ID=prot_P-wetherbeei_contig536.2.1|Name=mRNA_P-wetherbeei_contig536.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=201bp
MVKHNNVTPNQHYHKQWATRVRTWFDQPAKKQARRLARKAKAAKIAPRPT
QLLRPAVHCPTLKYNTKVRLGKGFTLEELKEAGVSRKLALTIGIAVDHRR
QNKSVEAFETNVARLKAYKSKLIVFPRRSNQKPKAGDAKPEETAAAVQAT
GVVLPLAASAPAVSYAKVTPEMKEFKAYATLRTARTDVRMAGIRQKKKDG
K
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mRNA from alignment at P-wetherbeei_contig536:3816..5580+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig536.2.1 ID=mRNA_P-wetherbeei_contig536.2.1|Name=mRNA_P-wetherbeei_contig536.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1765bp|location=Sequence derived from alignment at P-wetherbeei_contig536:3816..5580+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGTGAAGCACAACAACGTGACGCCCAACCAACATTACCACAAACAGTG GGCCACGCGGGTGCGGACGTGGTTCGACCAGCCCGCAAAGAAGCAGGCGA GACGGCTGGCCCGGAAGGCGAAGGCGGCGAAGATCGCCCCCCGCCCCACC CAGCTGTTGCGGCCTGCGGTCCACTGCCCGACCTTGAAGGTGAGCAGTAT TCTGGGGGGAAATCTTGCTTCATGGGACTGATTTGTGCGGATGCAAAGAT GCCCTCGTGATCTCGACTTCCATTATCGAAAGAGACTCACAGTTCTCAAA CTGCCATCATGCCTGGGTTACCTCTCGTCAATGCATCAGTTTGTGTGCCC CTCTATTTACCACTGCGGCGGCATTTCCGATGAACATGTTTCGTCCCATT ATTCTCTCAGTGCTGCCATCCCCTTTACAACGAGAAATTTGGGTTTTGGA AAAAATTGTAGTTCATAGTAGTCCATAGTAAAGCTTTGGATGGGTGGCGA CACGCTTTCTAGAGGTTATGCAAGCGGGCCAAGATTTGTACTGTGGAGCC TGCGGTGTGTATGCCAGTAGCAGCATGTTTGTAATCAAAACCTCTTTGCG GACACTCGTAAAATTGCGTCATTTCGTTGGCGCAGTACAACACCAAGGTG CGGCTGGGCAAAGGCTTCACGCTCGAGGAACTGAAGGTGCGTTTGATCCA GTTCGTCTACCACGGAAACGATCGGACCAGATCGGGACCTGTCACGGCCT TCTTTCTTGCTGTCAGGCCGTTAACACTGATTCTGTTTTGCAGCCGCGTT GGGGGGTACATCAGCTCTTTCTTTCTCTGAAAAAATTATTTTCGCTCGCG TACGTTTTGGTCCCGTGCCGGGTGGATGGGCGAATCCAGGAGGCGGGCGT GTCTCGGAAACTGGCGCTGACGATCGGCATTGCCGTCGACCACCGGCGCC AGAACAAGTCGGTGAGTGCGCGGAAGTTGAGGGAGAAATGCAGACGCGAG GTAACAGGATAGTTTTTCAAACGAGATGGTGATTGTCGTCACTTTAGACA GGAGTTCAGGTGATTTATGCAGCTTGCTCTAGTATTAACGGAATAACATT TGAAGCAGCTTCGTACGGATGTCAGGATTCTTGGACGTGGACCGGGGCCG AAGAATGAGGGGAGCAATACTGCTTTTTGAAAATCGGACGTGTCTCTTCA TTATTGCTGCGGCACGTCCCGTGTGTCCGTATTGAGACTGCATGGGGGGA GGAAGACATGTCATTAGAGCTATGGTGATACAAAGCGACCTTCGTTTCTC CTTCAGAGCCCGAAGGGTCCGAAGGGGCTGCGTGCCAATTATTTTTGCTT CGACTTCTGTTTTCCCGCGCCTTTCTGAGTCTCTGCGTTGGGCTATTGCG GACACGGCTGCTAAACCGTGAGTGATCGCGTTTTCCATCCTACTTTCTTT GATAATCCGGGCGGACCTGTTTAGGTGGAGGCGTTCGAGACGAACGTGGC CCGGCTGAAGGCGTACAAGAGCAAGCTGATCGTCTTCCCGCGGCGCTCCA ACCAGAAGCCCAAGGCTGGTGACGCCAAGCCGGAGGAGACGGCGGCGGCG GTGCAGGCGACGGGCGTCGTACTGCCGCTGGCGGCGTCGGCGCCGGCCGT CTCGTACGCCAAGGTGACGCCGGAGATGAAGGAGTTCAAGGCGTACGCCA CGCTGCGCACCGCCCGCACGGACGTGCGCATGGCGGGCATCCGCCAGAAG AAGAAGGACGGCAAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig536:3816..5580+

>mRNA_P-wetherbeei_contig536.2.1 ID=mRNA_P-wetherbeei_contig536.2.1|Name=mRNA_P-wetherbeei_contig536.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=603bp|location=Sequence derived from alignment at P-wetherbeei_contig536:3816..5580+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGTGAAGCACAACAACGTGACGCCCAACCAACATTACCACAAACAGTG
GGCCACGCGGGTGCGGACGTGGTTCGACCAGCCCGCAAAGAAGCAGGCGA
GACGGCTGGCCCGGAAGGCGAAGGCGGCGAAGATCGCCCCCCGCCCCACC
CAGCTGTTGCGGCCTGCGGTCCACTGCCCGACCTTGAAGTACAACACCAA
GGTGCGGCTGGGCAAAGGCTTCACGCTCGAGGAACTGAAGGAGGCGGGCG
TGTCTCGGAAACTGGCGCTGACGATCGGCATTGCCGTCGACCACCGGCGC
CAGAACAAGTCGGTGGAGGCGTTCGAGACGAACGTGGCCCGGCTGAAGGC
GTACAAGAGCAAGCTGATCGTCTTCCCGCGGCGCTCCAACCAGAAGCCCA
AGGCTGGTGACGCCAAGCCGGAGGAGACGGCGGCGGCGGTGCAGGCGACG
GGCGTCGTACTGCCGCTGGCGGCGTCGGCGCCGGCCGTCTCGTACGCCAA
GGTGACGCCGGAGATGAAGGAGTTCAAGGCGTACGCCACGCTGCGCACCG
CCCGCACGGACGTGCGCATGGCGGGCATCCGCCAGAAGAAGAAGGACGGC
AAG
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