mRNA_P-wetherbeei_contig53545.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig53545.1.1 vs. uniprot
Match: A0A0S8BCE6_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8BCE6_9PROT) HSP 1 Score: 155 bits (393), Expect = 5.710e-47 Identity = 73/115 (63.48%), Postives = 89/115 (77.39%), Query Frame = 1
Query: 1 MHPKARFLLTVAMDIDPDKEALFNEVYDTEHIPELLKVPGVLAVHRFALVPLNMSIGGITKNMVVEGEPKYIATYELENPGVPASAAWATAVELGRWPTQVRPYTSNRRHTLREL 345
M KA+++ +MD+DP++EA+FNEVYDTEHIP + KVPGV+A R LVPL M IGG K +V EGEPKY A YELE+P V S AWA AV+ GRWP++VRPYT NRRHTLR+L
Sbjct: 1 MAGKAKYVFIASMDVDPEREAIFNEVYDTEHIPLISKVPGVVAARRNVLVPLKMFIGGEVKAIVAEGEPKYSAIYELESPDVLTSEAWAKAVDAGRWPSEVRPYTRNRRHTLRKL 115
BLAST of mRNA_P-wetherbeei_contig53545.1.1 vs. uniprot
Match: A0A850SFV1_9PROT (Uncharacterized protein n=1 Tax=Parvularculaceae bacterium TaxID=2510335 RepID=A0A850SFV1_9PROT) HSP 1 Score: 155 bits (392), Expect = 8.110e-47 Identity = 72/116 (62.07%), Postives = 87/116 (75.00%), Query Frame = 1
Query: 1 MHPKARFLLTVAMDIDPDKEALFNEVYDTEHIPELLKVPGVLAVHRFALVPLNMSIGGITKNMVVEGEPKYIATYELENPGVPASAAWATAVELGRWPTQVRPYTSNRRHTLRELM 348
MHP+AR+L +MD++P KEALFNEVYDTEH+P LLKVPGVL+ R PL M IGG + MV EGEP+Y A YELE+ V S AWA A E GRWPT+VRPYT NRRH L++++
Sbjct: 1 MHPRARYLFIASMDVEPGKEALFNEVYDTEHVPLLLKVPGVLSAVRVTTEPLTMMIGGERRTMVAEGEPRYSAIYELESAEVLLSEAWARAAEQGRWPTEVRPYTRNRRHVLKKIL 116
BLAST of mRNA_P-wetherbeei_contig53545.1.1 vs. uniprot
Match: A0A3N5NGB4_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5NGB4_9PROT) HSP 1 Score: 155 bits (391), Expect = 1.230e-46 Identity = 70/113 (61.95%), Postives = 88/113 (77.88%), Query Frame = 1
Query: 10 KARFLLTVAMDIDPDKEALFNEVYDTEHIPELLKVPGVLAVHRFALVPLNMSIGGITKNMVVEGEPKYIATYELENPGVPASAAWATAVELGRWPTQVRPYTSNRRHTLRELM 348
+A +L +MD+DPDKEALFNEVYDTEHIP LLKVPGV+++ R+ VPL ++IGG + + EGEP+Y A YE+ENP V S AWA AVE GRWP +VRPYT NRR +LR+L+
Sbjct: 8 RANYLYVASMDVDPDKEALFNEVYDTEHIPMLLKVPGVISIKRYVTVPLTVTIGGQARTIAAEGEPRYSAVYEIENPEVLTSEAWAAAVEAGRWPAEVRPYTHNRRLSLRKLV 120
BLAST of mRNA_P-wetherbeei_contig53545.1.1 vs. uniprot
Match: A0A317H3W5_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A317H3W5_9PROT) HSP 1 Score: 154 bits (389), Expect = 2.400e-46 Identity = 69/116 (59.48%), Postives = 88/116 (75.86%), Query Frame = 1
Query: 1 MHPKARFLLTVAMDIDPDKEALFNEVYDTEHIPELLKVPGVLAVHRFALVPLNMSIGGITKNMVVEGEPKYIATYELENPGVPASAAWATAVELGRWPTQVRPYTSNRRHTLRELM 348
MHPK +++ +MD+DPDKEALFNE+Y+TEH+P +LKVPGVL+ R PL M IGG K +V EGEP+Y A YELE+ V S AWA AV+ GRWPT+VRP+T NRRH LR+++
Sbjct: 1 MHPKTKYIFIASMDVDPDKEALFNEIYETEHVPYVLKVPGVLSAMRTKTEPLRMFIGGEVKTIVAEGEPRYSAAYELESAEVLVSDAWARAVDAGRWPTEVRPFTRNRRHVLRKVL 116
BLAST of mRNA_P-wetherbeei_contig53545.1.1 vs. uniprot
Match: A0A7W1ALT0_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7W1ALT0_9PROT) HSP 1 Score: 154 bits (388), Expect = 3.200e-46 Identity = 73/116 (62.93%), Postives = 88/116 (75.86%), Query Frame = 1
Query: 1 MHPKARFLLTVAMDIDPDKEALFNEVYDTEHIPELLKVPGVLAVHRFALVPLNMSIGGITKNMVVEGEPKYIATYELENPGVPASAAWATAVELGRWPTQVRPYTSNRRHTLRELM 348
M KAR++LTV MD+D DKEALFNEVYDTEH+P + +VPGVLAV R+ VPL M IGG K +V+ GEP+Y+A YELE+P V +WA AV+ GRW TQVRPYT NR H L EL+
Sbjct: 1 MANKARYMLTVCMDVDADKEALFNEVYDTEHVPLISEVPGVLAVRRYRNVPLTMIIGGEAKAIVMAGEPQYLAVYELESPDVLTGESWAKAVDAGRWGTQVRPYTKNRSHVLHELI 116
BLAST of mRNA_P-wetherbeei_contig53545.1.1 vs. uniprot
Match: A0A2D6T4V0_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6T4V0_9PROT) HSP 1 Score: 147 bits (371), Expect = 1.200e-43 Identity = 68/111 (61.26%), Postives = 84/111 (75.68%), Query Frame = 1
Query: 16 RFLLTVAMDIDPDKEALFNEVYDTEHIPELLKVPGVLAVHRFALVPLNMSIGGITKNMVVEGEPKYIATYELENPGVPASAAWATAVELGRWPTQVRPYTSNRRHTLRELM 348
++L +MD+ P+K+ALFNEVYD EH+P LLKVPGV++V R PL +SIGG K +V EGEPKY A YE+E+P V S WA AVE GRWP +VRPYTSNRRH LR++M
Sbjct: 6 KYLFMASMDVAPEKDALFNEVYDEEHVPNLLKVPGVISVTRLTQEPLVLSIGGEQKEIVAEGEPKYTAIYEIESPDVLVSQEWADAVEKGRWPEEVRPYTSNRRHVLRKVM 116
BLAST of mRNA_P-wetherbeei_contig53545.1.1 vs. uniprot
Match: A0A1F7NFI0_9BACT (Uncharacterized protein n=1 Tax=Candidatus Rokubacteria bacterium RIFCSPLOWO2_02_FULL_68_19 TaxID=1802104 RepID=A0A1F7NFI0_9BACT) HSP 1 Score: 147 bits (370), Expect = 1.820e-43 Identity = 70/109 (64.22%), Postives = 84/109 (77.06%), Query Frame = 1
Query: 10 KARFLLTVAMDIDPDKEALFNEVYDTEHIPELLKVPGVLAVHRFALVPLNMSIGGITKNMVVEGEPKYIATYELENPGVPASAAWATAVELGRWPTQVRPYTSNRRHTL 336
++R+L +VAMD++PDKEALFNEVYDTEH+P L VPGV+AV RF PL M IGG + +VVE EPKY A YE+E+P V S AWA AV+ GRWP QVRP+T NRRH L
Sbjct: 4 QSRYLFSVAMDVEPDKEALFNEVYDTEHVPILKTVPGVIAVGRFKTEPLTMIIGGERRTIVVEAEPKYSALYEIESPEVLTSDAWAKAVDRGRWPGQVRPFTRNRRHLL 112
BLAST of mRNA_P-wetherbeei_contig53545.1.1 vs. uniprot
Match: A0A2E5Q899_9PROT (Uncharacterized protein n=3 Tax=root TaxID=1 RepID=A0A2E5Q899_9PROT) HSP 1 Score: 146 bits (369), Expect = 2.740e-43 Identity = 69/116 (59.48%), Postives = 85/116 (73.28%), Query Frame = 1
Query: 1 MHPKARFLLTVAMDIDPDKEALFNEVYDTEHIPELLKVPGVLAVHRFALVPLNMSIGGITKNMVVEGEPKYIATYELENPGVPASAAWATAVELGRWPTQVRPYTSNRRHTLRELM 348
M +AR+L T +MD+DPDKEALFNEVYDTEH+P L +VPGV+AV R P +SIGG + + EGE +Y ATYE+E+P V S WA AVE GRWP++VRPYT NRRH L +M
Sbjct: 1 MAQQARYLFTASMDVDPDKEALFNEVYDTEHVPLLSQVPGVIAVQRLIREPCTLSIGGELREIDPEGEARYGATYEIESPAVLKSPEWAAAVEQGRWPSEVRPYTHNRRHVLYRIM 116
BLAST of mRNA_P-wetherbeei_contig53545.1.1 vs. uniprot
Match: A0A524QIS0_9GAMM (Uncharacterized protein n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A524QIS0_9GAMM) HSP 1 Score: 145 bits (367), Expect = 5.360e-43 Identity = 67/116 (57.76%), Postives = 85/116 (73.28%), Query Frame = 1
Query: 1 MHPKARFLLTVAMDIDPDKEALFNEVYDTEHIPELLKVPGVLAVHRFALVPLNMSIGGITKNMVVEGEPKYIATYELENPGVPASAAWATAVELGRWPTQVRPYTSNRRHTLRELM 348
M + R+L +MD+DPDKE LFNEVYD EH+P L KVPGVL+V R+ PL M + G + + EGEP+Y A YE+E+P V S AWA A++ GRWPTQVRPYT NRRHTL+++M
Sbjct: 1 MPVQTRYLFIASMDVDPDKEDLFNEVYDKEHVPLLSKVPGVLSVTRYESAPLTMIMAGERRTVQAEGEPRYSAMYEIESPDVLVSDAWAKAIDHGRWPTQVRPYTRNRRHTLKKIM 116
BLAST of mRNA_P-wetherbeei_contig53545.1.1 vs. uniprot
Match: A0A355AR93_9GAMM (Uncharacterized protein n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A355AR93_9GAMM) HSP 1 Score: 144 bits (363), Expect = 2.180e-42 Identity = 66/116 (56.90%), Postives = 86/116 (74.14%), Query Frame = 1
Query: 1 MHPKARFLLTVAMDIDPDKEALFNEVYDTEHIPELLKVPGVLAVHRFALVPLNMSIGGITKNMVVEGEPKYIATYELENPGVPASAAWATAVELGRWPTQVRPYTSNRRHTLRELM 348
M +AR+L T +MD++PDKEALFNEVYDTEH+P L +VPGV+AV R P ++IGG + + + EP+Y ATYE+E+P V + WA AVE GRWP++VRPYT NRRHTL +M
Sbjct: 1 MAQQARYLFTASMDVNPDKEALFNEVYDTEHVPLLSRVPGVIAVQRLIREPCTIAIGGELREIDPKDEPRYSATYEIESPDVLTTPEWAEAVEQGRWPSEVRPYTRNRRHTLHRIM 116 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53545.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig53545.1.1 >prot_P-wetherbeei_contig53545.1.1 ID=prot_P-wetherbeei_contig53545.1.1|Name=mRNA_P-wetherbeei_contig53545.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=117bp MHPKARFLLTVAMDIDPDKEALFNEVYDTEHIPELLKVPGVLAVHRFALVback to top mRNA from alignment at P-wetherbeei_contig53545:104..454- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig53545.1.1 ID=mRNA_P-wetherbeei_contig53545.1.1|Name=mRNA_P-wetherbeei_contig53545.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=351bp|location=Sequence derived from alignment at P-wetherbeei_contig53545:104..454- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig53545:104..454- >mRNA_P-wetherbeei_contig53545.1.1 ID=mRNA_P-wetherbeei_contig53545.1.1|Name=mRNA_P-wetherbeei_contig53545.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=351bp|location=Sequence derived from alignment at P-wetherbeei_contig53545:104..454- (Phaeothamnion wetherbeei SAG_119_79)back to top |