mRNA_P-wetherbeei_contig5322.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5322.1.1
Unique NamemRNA_P-wetherbeei_contig5322.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5322.1.1 vs. uniprot
Match: A0A7X8XL53_9BURK (Histidine kinase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XL53_9BURK)

HSP 1 Score: 241 bits (616), Expect = 1.250e-70
Identity = 184/472 (38.98%), Postives = 251/472 (53.18%), Query Frame = 1
Query:    4 IRWLLMLYQIVLLFVTLGVLSLVIHYLLGRFLWQSSQERLRVAVAAGWYAELDDDAPKRRVVGLAAPRSFPSGLEDIARRSAGRELFVRILDLDGNVLAEGG-RFRYPPPIDPEQLNKLKMDE--RHSVDYFY---AGKREWQVLLVPVTDRGNQVGLVQVCGPYRPNRELLAAVDGYLLTGALAAGLLALLVTFGVTRLMFFPLRRLLVATSRVREGDLSARTGLDQGSNEIFTVAAAFDGMVDQLEETFAAQRRFVADASHELKTPLTAIGGMAEVLRVGADGGRPELALRTIEKEVDRMSALVADLLTLSSAENA-RVET--VSNLAPILKEMVAEMSLLHPDRSFAYAGTDELPVTGD---LYRAFRNLLDNA--HAYSSGPVRVDADTRKGRAVICVSDSGPGISPEDLPHIFDRFYRTDASRARKTGGSGLGLAIVRALVEKQGGTVTAQSTLGQGSTFTVTLPLA 1377
            + WL+    I  L  T+ +L+LV+H LL R+LW S+Q RL V  A    A L +   ++R+      R  P    ++ R  A   L  RILD  G  +A+ G   +  P   PE L + +     R  V   +   A +R   ++L+P+    +    +Q+  P+R   EL   +   LL   L A LL L  +  + RL+  PL+ L     RV  GDL AR GL  G NEI  VAAAFD MV +LE++FAAQ+RFVADASHELKTPLT+I GMAE+L   A       AL  ++KE +RM  L+ +LL LS AE   R E   + + + +L E+    SL+ P         D L V  D   L R  +NLLDNA  H+ S  PV+++     G+  I + D GPGI  + LPH+F+RFYR D SRAR TGGSGLGLAIVR +++   G    ++    G    + LP A
Sbjct:   16 LAWLVAAGYITCLVATILLLALVLHQLLARYLWFSTQMRL-VGQARSALA-LTEGGREQRLALSDLARREP---HEVVRLLAEAGLTSRILDPQGRTVAQAGPEVKGMPLPSPEHLIRARSGRMGRRMVGTAWLAEAPRRRMLLVLMPLGPPRSSPPWLQLGAPWRFAEELNTELGRMLLWTGLGALLLGLGTSLVIGRLLARPLQHLAATAHRVAGGDLQARAGLPAGRNEISAVAAAFDEMVARLEQSFAAQKRFVADASHELKTPLTSISGMAELLEQ-ATPEEQRRALGILQKEANRMGRLIEELLALSQAEEMPRTENWRIFDASGLLHELAGSSSLIDPSHPIELVIHDPLWVRADHDGLARVLQNLLDNARKHSPSGTPVKIEGRALPGQVEILMRDQGPGIPEQALPHVFERFYRADPSRARSTGGSGLGLAIVREILQAHQGQAHLRNHPEGGLEVLIRLPSA 481          
BLAST of mRNA_P-wetherbeei_contig5322.1.1 vs. uniprot
Match: UPI000D659B05 (HAMP domain-containing histidine kinase n=1 Tax=Moorella sp. Hama-1 TaxID=2138101 RepID=UPI000D659B05)

HSP 1 Score: 207 bits (526), Expect = 7.620e-58
Identity = 152/397 (38.29%), Postives = 217/397 (54.66%), Query Frame = 1
Query:  256 ELFVRILDLDGNVLAEGGRF-RYPPPIDPEQLNKLKMDERHSVDYF---YAGKREWQVLLVPVTDRGNQVGLVQVCGPYRPNRELLAAVDGYLLTGALAAGLLALLVTFGVTRLMFFPLRRLLVATSRVREG-DLSARTGLDQGSNEIFTVAAAFDGMVDQL-------EETFAAQRRFVADASHELKTPLTAIGGMAEVLRV--GADGGRPELALRTIEKEVDRMSALVADLLTLSSAENARVETVSNLA--PILKEMVAEMSLLHPDRSFAYAGTDELP---VTGD---LYRAFRNLLDNAHAYS--SGPVRVDADTRKGRAVICVSDSGPGISPEDLPHIFDRFYRTDASRARKTGGSGLGLAIVRALVEKQGGTVTAQSTLGQGSTFTVTLPL 1374
            + F++I+D DG V+       R   P+ P+ L    +   + + +F     G    ++  VP+  +   VGL+QV     P ++ L  +   LL   L    +A  + + + R    P+ RL     ++ EG DL  R       +E+  +AA F+GM+ +L       EE ++AQRRFVADASHEL+TPLT I G  ++LR   G     PE AL  I  E +RMS LV DLLTL+ A+  +      LA  P+L+E+  +  LL    +F   G D L    + G+   L + F  LLDNA  Y+   G + + A T  GR VI V D+GPGI+P+DL HIFDRFYR DA R+  + G+GLGLAI R +VE+  G +  +ST+G+G+TFTVTLPL
Sbjct:   77 DTFIQIVDSDGFVVTRSDNLGRQSLPLGPQTL----IQAGNGIAFFETDVVGNHSLRIYNVPLLLQNQPVGLLQVARLLSPVQQTLGNLRRVLLLLGLFLVFIATTLGYILARTALRPIDRLTQVAEQIGEGKDLDQRVPYSGPMDEVGRLAATFNGMLARLQRAYTSLEEAYSAQRRFVADASHELRTPLTTIRGNVDLLRKMQGRGDAMPEEALADIAGEAERMSRLVNDLLTLARADAGQEIKGEPLAVQPLLQEIARQAPLLG-QAAFTATGLDTLAGKMILGNRDFLKQLFFILLDNAFKYTPPEGRIELVASTETGRLVIKVRDTGPGIAPQDLEHIFDRFYRADAMRS--SDGTGLGLAIARWIVEQHQGQIGVESTVGEGTTFTVTLPL 466          
BLAST of mRNA_P-wetherbeei_contig5322.1.1 vs. uniprot
Match: A0A4P6BKV1_9THEO (Sensor protein QseC n=4 Tax=Moorella TaxID=44260 RepID=A0A4P6BKV1_9THEO)

HSP 1 Score: 204 bits (518), Expect = 1.140e-56
Identity = 165/486 (33.95%), Postives = 261/486 (53.70%), Query Frame = 1
Query:    1 SIRWLLMLYQIVLLFVTLGVLSLVIHYLLGRFLWQSSQERLRV-AVAAGWYAELDDDAPKRRVVGLAAPRSFPSGLEDIARRSAGRELFVRILDLDGNVLAEGGRF-RYPPPIDPEQLNKLKMDERHSVDYFYAGKRE---WQVLLVPVTDRGNQVGLVQVCGPYRPNRELLAAVDGYLLTGALAAGLLALLVTFGVTRLMFFPLRRLLVATSRVREG-DLSARTGLDQGSNEIFTVAAAFDGMVDQL-------EETFAAQRRFVADASHELKTPLTAIGGMAEVLRV--GADGGRPELALRTIEKEVDRMSALVADLLTLSSAENARVETVSN---LAPILKEMVAEMSLLHPDRSFAYAGTDELP---VTGD---LYRAFRNLLDNAHAYS--SGPVRVDADTRKGRAVICVSDSGPGISPEDLPHIFDRFYRTDASRARKTGGSGLGLAIVRALVEKQGGTVTAQSTLGQGSTFTVTLPLAK 1380
            ++RW L L   V+L +T  VL  +++ L+GR+L  +    L   A       +++ +  +++ + L     F           A  ++F++++D +G V+       R   P+ P+ L    +     +D+F     +    ++  VP+  +G  VG++QV     P ++ L+ +   L+   L A L+A ++ + + R    P+ RL    +++ EG DL+ R       +EI  +AA F+ M+ +L       EE ++AQRRFVADASHEL+TPLT I G  ++LR   GAD    E AL  I  E +RMS LV DLLTL+ A+ A +E       +A +L+E+V +  LL  + +F   G + L    V G+   L +    LLDNA  Y+   G + + A     + +I V D+GPGI+PEDL HIF+RFYR DA+R+  +GG+GLGLAI R +VE+  G +  +S +G+G+TF V LPL K
Sbjct:    2 TLRWRLTLLVTVILTLTFLVLGSLVYILMGRYLTSAIDRSLAFRAKEVISSIKVESNFLRQQRITLPDVNVF-----------AAPDIFLQVVDSEGFVVTRSSNLGRQTLPVGPQTL----IQAHQGIDFFTTESIDNYPLRIYNVPLMLKGQPVGILQVARLLSPVKKTLSDLRRVLIFLGLVAVLIATILGYILARAALRPIERLTQVAAQIGEGRDLAQRVPYHGPMDEIGRLAATFNAMLGRLQRAYTRLEEAYSAQRRFVADASHELRTPLTTIRGNIDLLRKMKGADMATQEEALADIASEAERMSRLVNDLLTLARAD-AGLEIKREPLEIAGLLQEIVRQAPLLG-EATFTARGLESLTGQQVLGNRDYLKQLLFILLDNAFKYTPAGGRIELAAAVEHEKLIIQVKDTGPGIAPEDLEHIFERFYRADATRS--SGGTGLGLAIARWIVEQHQGEIKVESRVGEGTTFMVILPLLK 468          
BLAST of mRNA_P-wetherbeei_contig5322.1.1 vs. uniprot
Match: UPI001C3BB84D (HAMP domain-containing histidine kinase n=1 Tax=Paenibacillus allorhizosphaerae TaxID=2849866 RepID=UPI001C3BB84D)

HSP 1 Score: 202 bits (513), Expect = 1.040e-55
Identity = 140/389 (35.99%), Postives = 213/389 (54.76%), Query Frame = 1
Query:  271 ILDLDGN--VLAEGGRFRYPPPIDPEQLNKLKMDERHSVDYFYAGK---REWQVLLVPVTDRGNQVGLVQVCGPYRPNRELLAAVDGYLLTGALAAGLLALLVTFGVTRLMFFPLRRLLVATSRVREGDLSARTGLDQGSNEIFTVAAAFDGMVDQLEETFAAQ-------RRFVADASHELKTPLTAIGGMAEVLRVGADGGRPEL--ALRTIEKEVDRMSALVADLLTLSSAENARVETVSN--LAPILKEMVAEMSLLHPDRSFAYAGTDELPVTGD---LYRAFRNLLDNAHAYSS---GPVRVDADTRKGRAVICVSDSGPGISPEDLPHIFDRFYRTDASRARKTGGSGLGLAIVRALVEKQGGTVTAQSTLGQGSTFTVTLP 1371
            ++D +G+  V++ G     PP + PE+  +  M+    V +         E  V+L PV  RG    LVQV     P +++LA      +  +L A L+ LL    V +    PL  ++    R+  G+L+ R   +QG  EI  +AA+F+GM+++LE +F A+       RRFVADASHEL+TPLT+I G  EVL  GA     +L  +L ++  E +R++ LV DLL L+  + A V  +++  L  +L+EM  +  LL   R      T+E     D   + +   NL  NA  ++    G +R+  +       + V D+GPGI PE LPH+F+RFYR+++SR RK GG+GLGL+I +++VE  GG++   S+ GQGS F VTLP
Sbjct:   93 LIDANGDLQVVSSGQDLSEPPKLSPEEY-QAAMEREKEVHFRIVRNSMGEEQLVVLQPVDSRGRMTSLVQVNTSTGPLKDMLARQLMTFIALSLLALLVGLLAFLPVLKRTLIPLSNMVRTVGRIDAGNLAVRIPSNQGQQEIDRLAASFNGMLERLESSFEAEKEAKEQMRRFVADASHELRTPLTSIHGFLEVLLRGAMHQPEQLRKSLLSMYGESERINKLVHDLLLLAKLDRAPVMELADGDLNRVLREMEPQFRLLAGKRHVDIRLTEEARCLYDADKMKQVVLNLFHNAVQHTDPDKGDIRISTEPIPDGLELAVRDNGPGIGPEHLPHLFERFYRSESSRTRKYGGAGLGLSITKSIVEAHGGSIRVHSSPGQGSAFIVTLP 480          
BLAST of mRNA_P-wetherbeei_contig5322.1.1 vs. uniprot
Match: A0A378ZN57_PANTH (Histidine kinase n=8 Tax=Paenibacillus TaxID=44249 RepID=A0A378ZN57_PANTH)

HSP 1 Score: 201 bits (512), Expect = 1.520e-55
Identity = 136/393 (34.61%), Postives = 216/393 (54.96%), Query Frame = 1
Query:  265 VRILDLDGNVLAE--GGRFRYPPPIDPEQLNKLKMDERHSVDYFYAGKREWQ---VLLVPVTDRGNQVGLVQVCGPYRPNRELLAAVDGYLLTGALAAGLLALLVTFGVTRLMFFPLRRLLVATSRVREGDLSARTGLDQGSNEIFTVAAAFDGMVDQLEETFAAQ-------RRFVADASHELKTPLTAIGGMAEVLRVGADGGRPEL--ALRTIEKEVDRMSALVADLLTLSSAENARVETVSN--LAPILKEMVAEMSLLHPDRSFAYAGTDELPVTGD---LYRAFRNLLDNAHAYSS---GPVRVDADTRKGRAVICVSDSGPGISPEDLPHIFDRFYRTDASRARKTGGSGLGLAIVRALVEKQGGTVTAQSTLGQGSTFTVTLPLA 1377
            + I+D +G + A   G +   PP + PE+        R  V+Y      E +   ++L P+  +G  +GL+QV    +P +E+LA+     L+ ++ A +  ++    V R    PL  ++    R+  G+L+ R    QG  EI  +A +F+GM+++LE +F A+       RRF+ADASHEL+TPLT+I G  EVL  GA     +L  AL ++  E +R++ LV DLL L+  + A V  +++  L  +L+E+  ++ LL   R    A  +E     D   + +   NL  NA  ++    G +R+  +T  G   + V D+G GI    LPH+FDRFYR+++SR RK GG+GLGL+I +++VE  GG++   S  GQG++F VTLP A
Sbjct:   92 LAIIDANGAIQAVSMGDKMADPPELSPEEYQAAMNKSRKEVNYRVMNDSEGEEQLLVLQPLEWKGRMIGLIQVNTSTKPLKEMLASQLLTFLSLSVLALIGGMIAFLPVLRRTLIPLSNMVHTVGRIDAGNLAERVPSRQGQLEIDRLALSFNGMLERLESSFEAEKEAKEQMRRFIADASHELRTPLTSIHGFLEVLLRGAMNQPEQLRKALISMHGESERINKLVQDLLLLAKLDRAPVMELADGDLNRVLRELGPQLCLLGGQRHVTLALAEEANCKYDPDKMKQVVLNLFHNAVQHTDPEKGDIRIVTETVPGGVELTVRDNGTGIGKRHLPHLFDRFYRSESSRTRKYGGAGLGLSITKSIVEAHGGSIRVSSAEGQGTSFIVTLPAA 484          
BLAST of mRNA_P-wetherbeei_contig5322.1.1 vs. uniprot
Match: A0A535D2D3_9CHLR (Histidine kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535D2D3_9CHLR)

HSP 1 Score: 197 bits (502), Expect = 3.930e-54
Identity = 150/416 (36.06%), Postives = 206/416 (49.52%), Query Frame = 1
Query:  193 LAAPRSFPSGLEDIARRSAGRELFVRILDLDGNVLAEGGRFRYPPPIDPEQLNKLKMDERHSVDYFYAGKREWQVLLV--PVTDRGNQVGLVQVCGPYRPNRELLAAVDGYLLTGALAAGLLALLVTFGVTRLMFFPLRRLLVATSRVREGDLSARTGLDQGSNEIFTVAAAFDGMVDQLEETFAAQR-------RFVADASHELKTPLTAIGGMAEVLRVGA--DGGRPELALRTIEKEVDRMSALVADLLTLSSAENARVETVSN------LAPILKEMVAEMSLLHPD---RSFAYAGTDELPVTGDLYRAFRNLLDNAHAYSSGPV-RVDADTRKGRAVICVSDSGPGISPEDLPHIFDRFYRTDASRARKTGGSGLGLAIVRALVEKQGGTVTAQSTLGQGSTFTVTLPLA 1377
            + A RS  + L   + RS G  ++   L       A+       P +D + L+++    R S D     +R    L+V  P   +    G+ Q+  P      +L         G     ++ALL+   +T     PLRRL     ++  GDL AR+ LD  S+E+  +A +FD M D++E  FAAQR       RF+ DASHEL+TP+TA+ G  +VLR GA  D    + AL  + +E +RM  LV DLLTL+  +  R  T  N      L  IL + ++ M    PD   R FA    +             NL+ NA  Y+ G   R       GR  I   D GPGISP DLPH+F+RFYR + +RAR+ GGSGLGL+IV+ LV  QGG V  +S  G G+T TV LPLA
Sbjct:   85 VLASRSIATLLSQTSGRSTGVVVYANDLTFAAQAPADADL----PRLDDDTLSRVVATRRRS-DATVIRRRNGDALVVAFPFQVKSALCGVAQMSTPLAAFDSVLGDEVALTALGGGTVLIVALLLGLALTGRTLRPLRRLTHTAEQLAAGDLRARSRLDPRSDEVGLMAQSFDNMADRIEAAFAAQRESEAQVRRFIDDASHELRTPVTALKGYIDVLRRGAGRDPAALDAALAAMAREAERMRELVLDLLTLARLDAHRPSTPENFDVNLELDGILDDSISGM----PDVVKRDFAPGPLEVRADRSAFLSIMSNLIANASKYAPGAAQRWSTAAEAGRVRIEAHDDGPGISPVDLPHVFERFYRGEKTRAREEGGSGLGLSIVQGLVHAQGGEVAIRSVEGSGTTVTVWLPLA 491          
BLAST of mRNA_P-wetherbeei_contig5322.1.1 vs. uniprot
Match: UPI00101DF204 (HAMP domain-containing histidine kinase n=1 Tax=Ectobacillus funiculus TaxID=137993 RepID=UPI00101DF204)

HSP 1 Score: 197 bits (501), Expect = 5.380e-54
Identity = 141/391 (36.06%), Postives = 212/391 (54.22%), Query Frame = 1
Query:  265 VRILDLDGN--VLAEGGRFRYPPPIDPEQLNKL---KMDERHSVDYFYAGKREWQVLLVPVTDRGNQVGLVQVCGPYRPNRELLAAVDGYLLTGALAAGLLALLVTFGVTRLMFFPLRRLLVATSRVREGDLSARTGLDQGSNEIFTVAAAFDGMVDQLEETFAAQ-------RRFVADASHELKTPLTAIGGMAEVLRVGADGGRPEL--ALRTIEKEVDRMSALVADLLTLSSAENA-RVETV-SNLAPILKEMVAEMSLLHPDRSFAYAGTDELPVTGD---LYRAFRNLLDNAHAYSS---GPVRVDADTRKGRAVICVSDSGPGISPEDLPHIFDRFYRTDASRARKTGGSGLGLAIVRALVEKQGGTVTAQSTLGQGSTFTVTLP 1371
            +  +D DGN  VL++  +   PP +  EQ  K    K +  +S+    AG  +  VL    +  GN +G++Q+  P  P +ELL       +  +L A LL L     V R    PL  ++    ++  G+L+ R    Q   EI  +AA+F+GM+++LE +F A+       RRFVADASHEL+TPLT+I G  EVL  GA     +L  AL+++  E +R++ LV +LL L+  +    +E +  NL  +L EM  ++ +L  +R       +++    D   L +   NL  NA  ++    G +RV     K    + VSD+GPGI  E LPH+F+RFYR+D+SR RK GG+GLGL+I +A+V+  GGT+   S  G+GS F V LP
Sbjct:   92 LAFIDWDGNYTVLSDEYQNVAPPRLAAEQYEKALKRKPELNYSIVKNDAGTEQLVVLQPTASKSGNIIGVIQISTPTAPLKELLLRQLATFIVLSLLAMLLGLFGYLPVLRKTLVPLFNMVETAEQIDAGNLARRFSTAQRQEEIDRLAASFNGMLERLEASFKAEQETKEQMRRFVADASHELRTPLTSIHGFLEVLLRGAANKPEQLNRALQSMHSESERLNKLVQNLLLLARLDRTPHLELLPGNLGELLGEMEPQLRILAGERQVDMEIKEQITCKYDSDQLKQIVLNLFHNAVQHTDSKEGHIRVVLTEEKNWIQLVVSDNGPGIGSEHLPHVFERFYRSDSSRTRKYGGAGLGLSITKAIVDAHGGTIHVTSEEGKGSRFYVRLP 482          
BLAST of mRNA_P-wetherbeei_contig5322.1.1 vs. uniprot
Match: A0A6J4V2Q6_9CHLR (Histidine kinase domain-containing protein (Fragment) n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4V2Q6_9CHLR)

HSP 1 Score: 190 bits (483), Expect = 6.440e-54
Identity = 117/237 (49.37%), Postives = 152/237 (64.14%), Query Frame = 1
Query:  706 DGMVDQLEETFAAQRRFVADASHELKTPLTAIGGMAEVLRVGADGG---RPELALRTIEKEVDRMSALVADLLTLS--SAENARVETVSNLAPILKEMVAEMSLLHPDRSFAYAGTDELPVTGD---LYRAFRNLLDNAHAYSS--GPVRVDADTRKGRAVICVSDSGPGISPEDLPHIFDRFYRTDASRARKT---GGSGLGLAIVRALVEKQGGTVTAQSTLGQGSTFTVTLPLA 1377
            D MVD+LEET  AQR+FVADASHEL+TPLTA+GG+ E+L +GAD G     + ALR+  +EV+R+S LV DLLTLS   A         +LA ++ E+  +   L  +R   +     LPV GD   L +   NL  NA A+S+  G + +  +    RA + V+D G GI P DLP IF+RFYR D SRAR++    GSGLGLAI RA+VE  GGT+ A+S LGQG+TFT+ LPLA
Sbjct:    1 DHMVDRLEETLKAQRQFVADASHELRTPLTALGGLIEMLLLGADRGDRATSQRALRSAHREVERLSRLVGDLLTLSRLDARPTVERRPLDLAALVAEVGEQTRFLAGEREVLWQVAGPLPVDGDADRLKQVLLNLTGNAVAFSAKTGQIVLRGERVGSRARVEVADDGAGIDPADLPGIFERFYRGDKSRARRSDGGAGSGLGLAIARAIVETHGGTIAARSVLGQGTTFTIELPLA 237          
BLAST of mRNA_P-wetherbeei_contig5322.1.1 vs. uniprot
Match: A0A0M2U4D1_9FIRM (Histidine kinase n=1 Tax=Clostridiales bacterium PH28_bin88 TaxID=1605376 RepID=A0A0M2U4D1_9FIRM)

HSP 1 Score: 196 bits (497), Expect = 1.300e-53
Identity = 160/479 (33.40%), Postives = 240/479 (50.10%), Query Frame = 1
Query:    1 SIRWLLMLYQIVLLFVTLGVLSLVIHYLLGRFLWQSSQERLRVAVAAGWYAELDDDAPKRRVVGLAAPRSFPSGLEDIARRSAGRELFVRILDLDGNVLAEGGRFRYPP-PIDPEQLNKLKMDERHSVDYFYAGKREWQVLLVPVTDRGNQVGLVQVCGPYRPNRELLAAVDGYLLTGALAAGLLALLVTFGVTRLMFFPLRRLLVATSRVREG-DLSARTGLDQGSNEIFTVAAAFDGMVDQL-------EETFAAQRRFVADASHELKTPLTAIGGMAEVLRVGADGGRPELA--LRTIEKEVDRMSALVADLLTLSSAENARV--ETVSNLAPILKEMVAEMSLLHPDRSFAYAGTDELP---VTGD---LYRAFRNLLDNAHAYSS--GPVRVDADTRKGRAVICVSDSGPGISPEDLPHIFDRFYRTDASRARKTGGSGLGLAIVRALVEKQGGTVTAQSTLGQGSTFTVTLPL 1374
            SIRW     ++ L F  +  L+L+     G FL+      L   V      + D+     R+VGL  P S    +       A  + +++++D  G V+A      +   PI P  L+ +++ +    +    G+   ++   P+  +G  +G++QV    R     +  +   L+ G+     LA    + + R    P+ R+  A   ++E  DL  R   D   +E+  +A  F+ M+ +L       EE +AAQRRFVADASHEL+TPLT I G  + LR   D    E A  LR I  E +RMS LV+DLL L+ A+  +   +    +  +L E+  +  ++     F   GT EL    V G    L + F  LLDNA  Y+   G V + A T +GR V+ V D+G GI+ EDLPH+FDRFYR D  +AR+ GGSGLGLAI + +VE+  G + A+S LG+GS F V LP+
Sbjct:    2 SIRW-----RLTLFFTAVLALTLLAF---GLFLYLLMDYNLNAEVNRAASRKADEVLRSIRIVGL--PLSTQRVVLPDVDVFASPDTYLQVVDTYGEVVARSANLGHQALPITPASLSAVRVGKEF-YETVRVGREALRLYYQPLIFQGEIIGILQVGRSLRSLETAMVRLRWLLILGSGLTVFLAGTTGWWLARAALRPIDRIASAAGAIQEARDLGRRIQYDGPPDEVGRLAGTFNEMLGRLQAAYQHLEEAYAAQRRFVADASHELRTPLTTIRGNVDFLRKMGDADPAERAEVLRDIAGETERMSRLVSDLLALARADAGQHPDKRPVEIRDLLNEVARQARIMAGQVEFRVEGTGELAGVQVLGSEDHLKQLFLILLDNAFKYTQTGGMVTLSAATGEGRLVVQVEDTGVGIAMEDLPHVFDRFYRAD--KARQAGGSGLGLAIAKWIVEEHDGEIEAESVLGEGSIFQVWLPV 467          
BLAST of mRNA_P-wetherbeei_contig5322.1.1 vs. uniprot
Match: UPI00110D6288 (HAMP domain-containing histidine kinase n=1 Tax=Paenibacillus mesophilus TaxID=2582849 RepID=UPI00110D6288)

HSP 1 Score: 196 bits (498), Expect = 1.310e-53
Identity = 146/424 (34.43%), Postives = 222/424 (52.36%), Query Frame = 1
Query:  193 LAAPRSF---PSGLEDIARRSAGRELFV-----RILDLDGNVLA------EGGRFRYPPPIDPEQLNKLKMDERHSVDYFYAGKREWQVLLVPVTDRGNQVGLVQVCGPYRPNRELLAAVDGYLLTGALAAGLLALLVTFGVTRLMFFPLRRLLVATSRVREGDLSARTGLDQGSNEIFTVAAAFDGMVDQLEETFAAQ-------RRFVADASHELKTPLTAIGGMAEVLRVGA--DGGRPELALRTIEKEVDRMSALVADLLTLSSAENARVETVSN--LAPILKEMVAEMSLLHPDRSFAY---AGTDELPVTGDLYRAFRNLLDNAHAYSS---GPVRVDADTRKGRAVICVSDSGPGISPEDLPHIFDRFYRTDASRARKTGGSGLGLAIVRALVEKQGGTVTAQSTLGQGSTFTVTLP 1371
            L+ PR     P G+ +   R  G   F+      ++DL GN+         G   + P  +  E L K KM   + +     G  E  V+L  +  RG  +G+VQ+     P  ++        ++ +L A +L LL    V R    PL +++    R+  G L  R    QG  E+  +A +F+GM+++LE +FAA+       RRF+ADASHEL+TPLT+I G  EVL  GA     R   AL ++  E +R++ LV DLL L+  + A +  +    L  ++KEM  ++ LL  +R  A    AGT  L     + +   NL  NA  ++    G + +     +GR  + V+D+G GI  E LP++FDRFYR+++SR RK GG+GLGL+I R++VE  GGT+ A+S +G+GS F V+LP
Sbjct:   60 LSVPRDVLANPDGIPEGNGRGRGPMFFLPDMTLAVIDLQGNITNMSNWPNSGTPPKLPQSVYDEALKK-KMRLNYKITRDDQGN-EQLVVLQQLDMRGRVLGVVQLSTSTAPLNDVAVRQLFTFISLSLLAMILGLLSFIPVMRRTLVPLSKIVDTVGRIDAGSLDERLPARQGQMEVDRLALSFNGMLERLEASFAAEKEAKEQMRRFIADASHELRTPLTSIHGFLEVLLRGAMNQPNRLHKALTSMHSESERINKLVRDLLLLAKMDRAPIMEMHEGALDRLIKEMEPQLRLLAGNREVALRMDAGTVCLYDADKMKQVVLNLFHNAVQHTDPEKGRIAIALTAVEGRIELSVTDNGAGIPEEHLPYVFDRFYRSESSRTRKAGGAGLGLSITRSIVEAHGGTIRAESRVGEGSVFAVSLP 481          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5322.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X8XL53_9BURK1.250e-7038.98Histidine kinase n=1 Tax=Burkholderiales bacterium... [more]
UPI000D659B057.620e-5838.29HAMP domain-containing histidine kinase n=1 Tax=Mo... [more]
A0A4P6BKV1_9THEO1.140e-5633.95Sensor protein QseC n=4 Tax=Moorella TaxID=44260 R... [more]
UPI001C3BB84D1.040e-5535.99HAMP domain-containing histidine kinase n=1 Tax=Pa... [more]
A0A378ZN57_PANTH1.520e-5534.61Histidine kinase n=8 Tax=Paenibacillus TaxID=44249... [more]
A0A535D2D3_9CHLR3.930e-5436.06Histidine kinase n=1 Tax=Chloroflexi bacterium Tax... [more]
UPI00101DF2045.380e-5436.06HAMP domain-containing histidine kinase n=1 Tax=Ec... [more]
A0A6J4V2Q6_9CHLR6.440e-5449.37Histidine kinase domain-containing protein (Fragme... [more]
A0A0M2U4D1_9FIRM1.300e-5333.40Histidine kinase n=1 Tax=Clostridiales bacterium P... [more]
UPI00110D62881.310e-5334.43HAMP domain-containing histidine kinase n=1 Tax=Pa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5322contigP-wetherbeei_contig5322:703..2085 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog370438.PTH_0036
Preferred nametcrY
PFAMsHAMP,HATPase_c,HisKA
Model size1383
Max annot lvl186801|Clostridia
KEGG koko:K02484
Hectar predicted targeting categorysignal peptide
Exons1
Evalue4.26e-54
EggNOG OGsCOG5000@1|root,COG5002@1|root,COG5000@2|Bacteria,COG5002@2|Bacteria,1TPWR@1239|Firmicutes,25ECY@186801|Clostridia,25ZZ0@186807|Peptococcaceae
EC2.7.13.3
DescriptionHistidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Cds size1365
COG categoryT
BRITEko00000,ko01000,ko01001,ko02022
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186797.0919273-UTR-P-wetherbeei_contig5322:702..7201683186797.0919273-UTR-P-wetherbeei_contig5322:702..720Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5322 703..720 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186797.1033542-CDS-P-wetherbeei_contig5322:720..20851683186797.1033542-CDS-P-wetherbeei_contig5322:720..2085Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5322 721..2085 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5322.1.1prot_P-wetherbeei_contig5322.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5322 721..2085 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5322.1.1

>prot_P-wetherbeei_contig5322.1.1 ID=prot_P-wetherbeei_contig5322.1.1|Name=mRNA_P-wetherbeei_contig5322.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=455bp
MLYQIVLLFVTLGVLSLVIHYLLGRFLWQSSQERLRVAVAAGWYAELDDD
APKRRVVGLAAPRSFPSGLEDIARRSAGRELFVRILDLDGNVLAEGGRFR
YPPPIDPEQLNKLKMDERHSVDYFYAGKREWQVLLVPVTDRGNQVGLVQV
CGPYRPNRELLAAVDGYLLTGALAAGLLALLVTFGVTRLMFFPLRRLLVA
TSRVREGDLSARTGLDQGSNEIFTVAAAFDGMVDQLEETFAAQRRFVADA
SHELKTPLTAIGGMAEVLRVGADGGRPELALRTIEKEVDRMSALVADLLT
LSSAENARVETVSNLAPILKEMVAEMSLLHPDRSFAYAGTDELPVTGDLY
RAFRNLLDNAHAYSSGPVRVDADTRKGRAVICVSDSGPGISPEDLPHIFD
RFYRTDASRARKTGGSGLGLAIVRALVEKQGGTVTAQSTLGQGSTFTVTL
PLAK*
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mRNA from alignment at P-wetherbeei_contig5322:703..2085+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5322.1.1 ID=mRNA_P-wetherbeei_contig5322.1.1|Name=mRNA_P-wetherbeei_contig5322.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1383bp|location=Sequence derived from alignment at P-wetherbeei_contig5322:703..2085+ (Phaeothamnion wetherbeei SAG_119_79)
TCGATTCGGTGGCTTCTGATGCTCTATCAAATAGTGCTTCTCTTTGTGAC GCTGGGGGTCCTCAGTCTGGTCATCCACTACTTGCTTGGAAGATTTCTCT GGCAGTCAAGTCAAGAAAGGCTGCGGGTCGCGGTGGCTGCCGGATGGTAT GCTGAACTTGACGACGATGCACCCAAAAGGCGCGTCGTCGGGCTCGCCGC TCCCCGCAGCTTTCCTAGCGGCCTCGAAGACATTGCGCGTCGCAGTGCCG GCCGAGAGCTTTTCGTTCGCATTCTTGACCTCGACGGCAATGTGCTAGCA GAAGGCGGCCGGTTCCGTTACCCGCCGCCGATAGACCCTGAGCAACTTAA TAAGCTCAAGATGGATGAGCGCCACAGCGTCGATTACTTCTATGCCGGCA AGCGCGAGTGGCAAGTCCTTCTCGTTCCGGTTACGGATCGTGGGAATCAG GTGGGGCTCGTTCAAGTGTGTGGTCCCTACCGACCCAATCGCGAGCTGCT AGCCGCAGTTGACGGGTATCTTCTGACAGGCGCCCTCGCTGCTGGATTAC TGGCGCTCCTGGTAACCTTTGGAGTCACGCGTCTTATGTTCTTCCCTCTC CGCCGGCTCCTGGTAGCGACGTCGCGCGTCCGCGAAGGGGATCTATCGGC ACGCACCGGGCTTGACCAGGGGAGCAACGAGATTTTTACGGTGGCTGCAG CGTTCGATGGGATGGTCGATCAACTCGAAGAGACATTCGCGGCTCAACGG CGCTTCGTCGCCGACGCCTCGCACGAACTCAAGACGCCTCTTACCGCCAT CGGCGGCATGGCAGAGGTCTTGCGAGTGGGTGCGGACGGGGGAAGACCTG AGCTGGCTCTGCGAACCATCGAGAAAGAAGTCGACCGAATGAGCGCCCTG GTGGCCGATCTCTTAACTCTTTCCAGCGCGGAAAACGCTAGAGTCGAAAC CGTCAGCAATCTTGCACCCATCTTGAAGGAGATGGTCGCGGAGATGAGCC TGCTCCATCCGGACCGCTCGTTCGCTTATGCGGGAACAGACGAGCTGCCG GTTACGGGCGACCTTTACAGGGCGTTTCGCAATCTCCTGGACAATGCCCA TGCCTACTCCTCAGGGCCTGTTCGCGTAGATGCCGATACCCGGAAGGGTC GAGCTGTCATTTGCGTGTCTGACTCTGGACCTGGAATCTCTCCGGAGGAC CTCCCGCACATATTCGACCGTTTCTACCGAACCGACGCTTCAAGGGCACG CAAAACCGGAGGCAGTGGTCTGGGGCTGGCCATCGTGCGAGCTCTGGTCG AAAAACAGGGCGGCACCGTGACAGCTCAAAGCACGCTCGGCCAAGGCTCG ACGTTCACGGTGACCCTACCTTTGGCCAAATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5322:703..2085+

>mRNA_P-wetherbeei_contig5322.1.1 ID=mRNA_P-wetherbeei_contig5322.1.1|Name=mRNA_P-wetherbeei_contig5322.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1365bp|location=Sequence derived from alignment at P-wetherbeei_contig5322:703..2085+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTCTATCAAATAGTGCTTCTCTTTGTGACGCTGGGGGTCCTCAGTCT
GGTCATCCACTACTTGCTTGGAAGATTTCTCTGGCAGTCAAGTCAAGAAA
GGCTGCGGGTCGCGGTGGCTGCCGGATGGTATGCTGAACTTGACGACGAT
GCACCCAAAAGGCGCGTCGTCGGGCTCGCCGCTCCCCGCAGCTTTCCTAG
CGGCCTCGAAGACATTGCGCGTCGCAGTGCCGGCCGAGAGCTTTTCGTTC
GCATTCTTGACCTCGACGGCAATGTGCTAGCAGAAGGCGGCCGGTTCCGT
TACCCGCCGCCGATAGACCCTGAGCAACTTAATAAGCTCAAGATGGATGA
GCGCCACAGCGTCGATTACTTCTATGCCGGCAAGCGCGAGTGGCAAGTCC
TTCTCGTTCCGGTTACGGATCGTGGGAATCAGGTGGGGCTCGTTCAAGTG
TGTGGTCCCTACCGACCCAATCGCGAGCTGCTAGCCGCAGTTGACGGGTA
TCTTCTGACAGGCGCCCTCGCTGCTGGATTACTGGCGCTCCTGGTAACCT
TTGGAGTCACGCGTCTTATGTTCTTCCCTCTCCGCCGGCTCCTGGTAGCG
ACGTCGCGCGTCCGCGAAGGGGATCTATCGGCACGCACCGGGCTTGACCA
GGGGAGCAACGAGATTTTTACGGTGGCTGCAGCGTTCGATGGGATGGTCG
ATCAACTCGAAGAGACATTCGCGGCTCAACGGCGCTTCGTCGCCGACGCC
TCGCACGAACTCAAGACGCCTCTTACCGCCATCGGCGGCATGGCAGAGGT
CTTGCGAGTGGGTGCGGACGGGGGAAGACCTGAGCTGGCTCTGCGAACCA
TCGAGAAAGAAGTCGACCGAATGAGCGCCCTGGTGGCCGATCTCTTAACT
CTTTCCAGCGCGGAAAACGCTAGAGTCGAAACCGTCAGCAATCTTGCACC
CATCTTGAAGGAGATGGTCGCGGAGATGAGCCTGCTCCATCCGGACCGCT
CGTTCGCTTATGCGGGAACAGACGAGCTGCCGGTTACGGGCGACCTTTAC
AGGGCGTTTCGCAATCTCCTGGACAATGCCCATGCCTACTCCTCAGGGCC
TGTTCGCGTAGATGCCGATACCCGGAAGGGTCGAGCTGTCATTTGCGTGT
CTGACTCTGGACCTGGAATCTCTCCGGAGGACCTCCCGCACATATTCGAC
CGTTTCTACCGAACCGACGCTTCAAGGGCACGCAAAACCGGAGGCAGTGG
TCTGGGGCTGGCCATCGTGCGAGCTCTGGTCGAAAAACAGGGCGGCACCG
TGACAGCTCAAAGCACGCTCGGCCAAGGCTCGACGTTCACGGTGACCCTA
CCTTTGGCCAAATGA
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