mRNA_P-wetherbeei_contig5322.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5322.1.1 vs. uniprot
Match: A0A7X8XL53_9BURK (Histidine kinase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XL53_9BURK) HSP 1 Score: 241 bits (616), Expect = 1.250e-70 Identity = 184/472 (38.98%), Postives = 251/472 (53.18%), Query Frame = 1
Query: 4 IRWLLMLYQIVLLFVTLGVLSLVIHYLLGRFLWQSSQERLRVAVAAGWYAELDDDAPKRRVVGLAAPRSFPSGLEDIARRSAGRELFVRILDLDGNVLAEGG-RFRYPPPIDPEQLNKLKMDE--RHSVDYFY---AGKREWQVLLVPVTDRGNQVGLVQVCGPYRPNRELLAAVDGYLLTGALAAGLLALLVTFGVTRLMFFPLRRLLVATSRVREGDLSARTGLDQGSNEIFTVAAAFDGMVDQLEETFAAQRRFVADASHELKTPLTAIGGMAEVLRVGADGGRPELALRTIEKEVDRMSALVADLLTLSSAENA-RVET--VSNLAPILKEMVAEMSLLHPDRSFAYAGTDELPVTGD---LYRAFRNLLDNA--HAYSSGPVRVDADTRKGRAVICVSDSGPGISPEDLPHIFDRFYRTDASRARKTGGSGLGLAIVRALVEKQGGTVTAQSTLGQGSTFTVTLPLA 1377
+ WL+ I L T+ +L+LV+H LL R+LW S+Q RL V A A L + ++R+ R P ++ R A L RILD G +A+ G + P PE L + + R V + A +R ++L+P+ + +Q+ P+R EL + LL L A LL L + + RL+ PL+ L RV GDL AR GL G NEI VAAAFD MV +LE++FAAQ+RFVADASHELKTPLT+I GMAE+L A AL ++KE +RM L+ +LL LS AE R E + + + +L E+ SL+ P D L V D L R +NLLDNA H+ S PV+++ G+ I + D GPGI + LPH+F+RFYR D SRAR TGGSGLGLAIVR +++ G ++ G + LP A
Sbjct: 16 LAWLVAAGYITCLVATILLLALVLHQLLARYLWFSTQMRL-VGQARSALA-LTEGGREQRLALSDLARREP---HEVVRLLAEAGLTSRILDPQGRTVAQAGPEVKGMPLPSPEHLIRARSGRMGRRMVGTAWLAEAPRRRMLLVLMPLGPPRSSPPWLQLGAPWRFAEELNTELGRMLLWTGLGALLLGLGTSLVIGRLLARPLQHLAATAHRVAGGDLQARAGLPAGRNEISAVAAAFDEMVARLEQSFAAQKRFVADASHELKTPLTSISGMAELLEQ-ATPEEQRRALGILQKEANRMGRLIEELLALSQAEEMPRTENWRIFDASGLLHELAGSSSLIDPSHPIELVIHDPLWVRADHDGLARVLQNLLDNARKHSPSGTPVKIEGRALPGQVEILMRDQGPGIPEQALPHVFERFYRADPSRARSTGGSGLGLAIVREILQAHQGQAHLRNHPEGGLEVLIRLPSA 481
BLAST of mRNA_P-wetherbeei_contig5322.1.1 vs. uniprot
Match: UPI000D659B05 (HAMP domain-containing histidine kinase n=1 Tax=Moorella sp. Hama-1 TaxID=2138101 RepID=UPI000D659B05) HSP 1 Score: 207 bits (526), Expect = 7.620e-58 Identity = 152/397 (38.29%), Postives = 217/397 (54.66%), Query Frame = 1
Query: 256 ELFVRILDLDGNVLAEGGRF-RYPPPIDPEQLNKLKMDERHSVDYF---YAGKREWQVLLVPVTDRGNQVGLVQVCGPYRPNRELLAAVDGYLLTGALAAGLLALLVTFGVTRLMFFPLRRLLVATSRVREG-DLSARTGLDQGSNEIFTVAAAFDGMVDQL-------EETFAAQRRFVADASHELKTPLTAIGGMAEVLRV--GADGGRPELALRTIEKEVDRMSALVADLLTLSSAENARVETVSNLA--PILKEMVAEMSLLHPDRSFAYAGTDELP---VTGD---LYRAFRNLLDNAHAYS--SGPVRVDADTRKGRAVICVSDSGPGISPEDLPHIFDRFYRTDASRARKTGGSGLGLAIVRALVEKQGGTVTAQSTLGQGSTFTVTLPL 1374
+ F++I+D DG V+ R P+ P+ L + + + +F G ++ VP+ + VGL+QV P ++ L + LL L +A + + + R P+ RL ++ EG DL R +E+ +AA F+GM+ +L EE ++AQRRFVADASHEL+TPLT I G ++LR G PE AL I E +RMS LV DLLTL+ A+ + LA P+L+E+ + LL +F G D L + G+ L + F LLDNA Y+ G + + A T GR VI V D+GPGI+P+DL HIFDRFYR DA R+ + G+GLGLAI R +VE+ G + +ST+G+G+TFTVTLPL
Sbjct: 77 DTFIQIVDSDGFVVTRSDNLGRQSLPLGPQTL----IQAGNGIAFFETDVVGNHSLRIYNVPLLLQNQPVGLLQVARLLSPVQQTLGNLRRVLLLLGLFLVFIATTLGYILARTALRPIDRLTQVAEQIGEGKDLDQRVPYSGPMDEVGRLAATFNGMLARLQRAYTSLEEAYSAQRRFVADASHELRTPLTTIRGNVDLLRKMQGRGDAMPEEALADIAGEAERMSRLVNDLLTLARADAGQEIKGEPLAVQPLLQEIARQAPLLG-QAAFTATGLDTLAGKMILGNRDFLKQLFFILLDNAFKYTPPEGRIELVASTETGRLVIKVRDTGPGIAPQDLEHIFDRFYRADAMRS--SDGTGLGLAIARWIVEQHQGQIGVESTVGEGTTFTVTLPL 466
BLAST of mRNA_P-wetherbeei_contig5322.1.1 vs. uniprot
Match: A0A4P6BKV1_9THEO (Sensor protein QseC n=4 Tax=Moorella TaxID=44260 RepID=A0A4P6BKV1_9THEO) HSP 1 Score: 204 bits (518), Expect = 1.140e-56 Identity = 165/486 (33.95%), Postives = 261/486 (53.70%), Query Frame = 1
Query: 1 SIRWLLMLYQIVLLFVTLGVLSLVIHYLLGRFLWQSSQERLRV-AVAAGWYAELDDDAPKRRVVGLAAPRSFPSGLEDIARRSAGRELFVRILDLDGNVLAEGGRF-RYPPPIDPEQLNKLKMDERHSVDYFYAGKRE---WQVLLVPVTDRGNQVGLVQVCGPYRPNRELLAAVDGYLLTGALAAGLLALLVTFGVTRLMFFPLRRLLVATSRVREG-DLSARTGLDQGSNEIFTVAAAFDGMVDQL-------EETFAAQRRFVADASHELKTPLTAIGGMAEVLRV--GADGGRPELALRTIEKEVDRMSALVADLLTLSSAENARVETVSN---LAPILKEMVAEMSLLHPDRSFAYAGTDELP---VTGD---LYRAFRNLLDNAHAYS--SGPVRVDADTRKGRAVICVSDSGPGISPEDLPHIFDRFYRTDASRARKTGGSGLGLAIVRALVEKQGGTVTAQSTLGQGSTFTVTLPLAK 1380
++RW L L V+L +T VL +++ L+GR+L + L A +++ + +++ + L F A ++F++++D +G V+ R P+ P+ L + +D+F + ++ VP+ +G VG++QV P ++ L+ + L+ L A L+A ++ + + R P+ RL +++ EG DL+ R +EI +AA F+ M+ +L EE ++AQRRFVADASHEL+TPLT I G ++LR GAD E AL I E +RMS LV DLLTL+ A+ A +E +A +L+E+V + LL + +F G + L V G+ L + LLDNA Y+ G + + A + +I V D+GPGI+PEDL HIF+RFYR DA+R+ +GG+GLGLAI R +VE+ G + +S +G+G+TF V LPL K
Sbjct: 2 TLRWRLTLLVTVILTLTFLVLGSLVYILMGRYLTSAIDRSLAFRAKEVISSIKVESNFLRQQRITLPDVNVF-----------AAPDIFLQVVDSEGFVVTRSSNLGRQTLPVGPQTL----IQAHQGIDFFTTESIDNYPLRIYNVPLMLKGQPVGILQVARLLSPVKKTLSDLRRVLIFLGLVAVLIATILGYILARAALRPIERLTQVAAQIGEGRDLAQRVPYHGPMDEIGRLAATFNAMLGRLQRAYTRLEEAYSAQRRFVADASHELRTPLTTIRGNIDLLRKMKGADMATQEEALADIASEAERMSRLVNDLLTLARAD-AGLEIKREPLEIAGLLQEIVRQAPLLG-EATFTARGLESLTGQQVLGNRDYLKQLLFILLDNAFKYTPAGGRIELAAAVEHEKLIIQVKDTGPGIAPEDLEHIFERFYRADATRS--SGGTGLGLAIARWIVEQHQGEIKVESRVGEGTTFMVILPLLK 468
BLAST of mRNA_P-wetherbeei_contig5322.1.1 vs. uniprot
Match: UPI001C3BB84D (HAMP domain-containing histidine kinase n=1 Tax=Paenibacillus allorhizosphaerae TaxID=2849866 RepID=UPI001C3BB84D) HSP 1 Score: 202 bits (513), Expect = 1.040e-55 Identity = 140/389 (35.99%), Postives = 213/389 (54.76%), Query Frame = 1
Query: 271 ILDLDGN--VLAEGGRFRYPPPIDPEQLNKLKMDERHSVDYFYAGK---REWQVLLVPVTDRGNQVGLVQVCGPYRPNRELLAAVDGYLLTGALAAGLLALLVTFGVTRLMFFPLRRLLVATSRVREGDLSARTGLDQGSNEIFTVAAAFDGMVDQLEETFAAQ-------RRFVADASHELKTPLTAIGGMAEVLRVGADGGRPEL--ALRTIEKEVDRMSALVADLLTLSSAENARVETVSN--LAPILKEMVAEMSLLHPDRSFAYAGTDELPVTGD---LYRAFRNLLDNAHAYSS---GPVRVDADTRKGRAVICVSDSGPGISPEDLPHIFDRFYRTDASRARKTGGSGLGLAIVRALVEKQGGTVTAQSTLGQGSTFTVTLP 1371
++D +G+ V++ G PP + PE+ + M+ V + E V+L PV RG LVQV P +++LA + +L A L+ LL V + PL ++ R+ G+L+ R +QG EI +AA+F+GM+++LE +F A+ RRFVADASHEL+TPLT+I G EVL GA +L +L ++ E +R++ LV DLL L+ + A V +++ L +L+EM + LL R T+E D + + NL NA ++ G +R+ + + V D+GPGI PE LPH+F+RFYR+++SR RK GG+GLGL+I +++VE GG++ S+ GQGS F VTLP
Sbjct: 93 LIDANGDLQVVSSGQDLSEPPKLSPEEY-QAAMEREKEVHFRIVRNSMGEEQLVVLQPVDSRGRMTSLVQVNTSTGPLKDMLARQLMTFIALSLLALLVGLLAFLPVLKRTLIPLSNMVRTVGRIDAGNLAVRIPSNQGQQEIDRLAASFNGMLERLESSFEAEKEAKEQMRRFVADASHELRTPLTSIHGFLEVLLRGAMHQPEQLRKSLLSMYGESERINKLVHDLLLLAKLDRAPVMELADGDLNRVLREMEPQFRLLAGKRHVDIRLTEEARCLYDADKMKQVVLNLFHNAVQHTDPDKGDIRISTEPIPDGLELAVRDNGPGIGPEHLPHLFERFYRSESSRTRKYGGAGLGLSITKSIVEAHGGSIRVHSSPGQGSAFIVTLP 480
BLAST of mRNA_P-wetherbeei_contig5322.1.1 vs. uniprot
Match: A0A378ZN57_PANTH (Histidine kinase n=8 Tax=Paenibacillus TaxID=44249 RepID=A0A378ZN57_PANTH) HSP 1 Score: 201 bits (512), Expect = 1.520e-55 Identity = 136/393 (34.61%), Postives = 216/393 (54.96%), Query Frame = 1
Query: 265 VRILDLDGNVLAE--GGRFRYPPPIDPEQLNKLKMDERHSVDYFYAGKREWQ---VLLVPVTDRGNQVGLVQVCGPYRPNRELLAAVDGYLLTGALAAGLLALLVTFGVTRLMFFPLRRLLVATSRVREGDLSARTGLDQGSNEIFTVAAAFDGMVDQLEETFAAQ-------RRFVADASHELKTPLTAIGGMAEVLRVGADGGRPEL--ALRTIEKEVDRMSALVADLLTLSSAENARVETVSN--LAPILKEMVAEMSLLHPDRSFAYAGTDELPVTGD---LYRAFRNLLDNAHAYSS---GPVRVDADTRKGRAVICVSDSGPGISPEDLPHIFDRFYRTDASRARKTGGSGLGLAIVRALVEKQGGTVTAQSTLGQGSTFTVTLPLA 1377
+ I+D +G + A G + PP + PE+ R V+Y E + ++L P+ +G +GL+QV +P +E+LA+ L+ ++ A + ++ V R PL ++ R+ G+L+ R QG EI +A +F+GM+++LE +F A+ RRF+ADASHEL+TPLT+I G EVL GA +L AL ++ E +R++ LV DLL L+ + A V +++ L +L+E+ ++ LL R A +E D + + NL NA ++ G +R+ +T G + V D+G GI LPH+FDRFYR+++SR RK GG+GLGL+I +++VE GG++ S GQG++F VTLP A
Sbjct: 92 LAIIDANGAIQAVSMGDKMADPPELSPEEYQAAMNKSRKEVNYRVMNDSEGEEQLLVLQPLEWKGRMIGLIQVNTSTKPLKEMLASQLLTFLSLSVLALIGGMIAFLPVLRRTLIPLSNMVHTVGRIDAGNLAERVPSRQGQLEIDRLALSFNGMLERLESSFEAEKEAKEQMRRFIADASHELRTPLTSIHGFLEVLLRGAMNQPEQLRKALISMHGESERINKLVQDLLLLAKLDRAPVMELADGDLNRVLRELGPQLCLLGGQRHVTLALAEEANCKYDPDKMKQVVLNLFHNAVQHTDPEKGDIRIVTETVPGGVELTVRDNGTGIGKRHLPHLFDRFYRSESSRTRKYGGAGLGLSITKSIVEAHGGSIRVSSAEGQGTSFIVTLPAA 484
BLAST of mRNA_P-wetherbeei_contig5322.1.1 vs. uniprot
Match: A0A535D2D3_9CHLR (Histidine kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535D2D3_9CHLR) HSP 1 Score: 197 bits (502), Expect = 3.930e-54 Identity = 150/416 (36.06%), Postives = 206/416 (49.52%), Query Frame = 1
Query: 193 LAAPRSFPSGLEDIARRSAGRELFVRILDLDGNVLAEGGRFRYPPPIDPEQLNKLKMDERHSVDYFYAGKREWQVLLV--PVTDRGNQVGLVQVCGPYRPNRELLAAVDGYLLTGALAAGLLALLVTFGVTRLMFFPLRRLLVATSRVREGDLSARTGLDQGSNEIFTVAAAFDGMVDQLEETFAAQR-------RFVADASHELKTPLTAIGGMAEVLRVGA--DGGRPELALRTIEKEVDRMSALVADLLTLSSAENARVETVSN------LAPILKEMVAEMSLLHPD---RSFAYAGTDELPVTGDLYRAFRNLLDNAHAYSSGPV-RVDADTRKGRAVICVSDSGPGISPEDLPHIFDRFYRTDASRARKTGGSGLGLAIVRALVEKQGGTVTAQSTLGQGSTFTVTLPLA 1377
+ A RS + L + RS G ++ L A+ P +D + L+++ R S D +R L+V P + G+ Q+ P +L G ++ALL+ +T PLRRL ++ GDL AR+ LD S+E+ +A +FD M D++E FAAQR RF+ DASHEL+TP+TA+ G +VLR GA D + AL + +E +RM LV DLLTL+ + R T N L IL + ++ M PD R FA + NL+ NA Y+ G R GR I D GPGISP DLPH+F+RFYR + +RAR+ GGSGLGL+IV+ LV QGG V +S G G+T TV LPLA
Sbjct: 85 VLASRSIATLLSQTSGRSTGVVVYANDLTFAAQAPADADL----PRLDDDTLSRVVATRRRS-DATVIRRRNGDALVVAFPFQVKSALCGVAQMSTPLAAFDSVLGDEVALTALGGGTVLIVALLLGLALTGRTLRPLRRLTHTAEQLAAGDLRARSRLDPRSDEVGLMAQSFDNMADRIEAAFAAQRESEAQVRRFIDDASHELRTPVTALKGYIDVLRRGAGRDPAALDAALAAMAREAERMRELVLDLLTLARLDAHRPSTPENFDVNLELDGILDDSISGM----PDVVKRDFAPGPLEVRADRSAFLSIMSNLIANASKYAPGAAQRWSTAAEAGRVRIEAHDDGPGISPVDLPHVFERFYRGEKTRAREEGGSGLGLSIVQGLVHAQGGEVAIRSVEGSGTTVTVWLPLA 491
BLAST of mRNA_P-wetherbeei_contig5322.1.1 vs. uniprot
Match: UPI00101DF204 (HAMP domain-containing histidine kinase n=1 Tax=Ectobacillus funiculus TaxID=137993 RepID=UPI00101DF204) HSP 1 Score: 197 bits (501), Expect = 5.380e-54 Identity = 141/391 (36.06%), Postives = 212/391 (54.22%), Query Frame = 1
Query: 265 VRILDLDGN--VLAEGGRFRYPPPIDPEQLNKL---KMDERHSVDYFYAGKREWQVLLVPVTDRGNQVGLVQVCGPYRPNRELLAAVDGYLLTGALAAGLLALLVTFGVTRLMFFPLRRLLVATSRVREGDLSARTGLDQGSNEIFTVAAAFDGMVDQLEETFAAQ-------RRFVADASHELKTPLTAIGGMAEVLRVGADGGRPEL--ALRTIEKEVDRMSALVADLLTLSSAENA-RVETV-SNLAPILKEMVAEMSLLHPDRSFAYAGTDELPVTGD---LYRAFRNLLDNAHAYSS---GPVRVDADTRKGRAVICVSDSGPGISPEDLPHIFDRFYRTDASRARKTGGSGLGLAIVRALVEKQGGTVTAQSTLGQGSTFTVTLP 1371
+ +D DGN VL++ + PP + EQ K K + +S+ AG + VL + GN +G++Q+ P P +ELL + +L A LL L V R PL ++ ++ G+L+ R Q EI +AA+F+GM+++LE +F A+ RRFVADASHEL+TPLT+I G EVL GA +L AL+++ E +R++ LV +LL L+ + +E + NL +L EM ++ +L +R +++ D L + NL NA ++ G +RV K + VSD+GPGI E LPH+F+RFYR+D+SR RK GG+GLGL+I +A+V+ GGT+ S G+GS F V LP
Sbjct: 92 LAFIDWDGNYTVLSDEYQNVAPPRLAAEQYEKALKRKPELNYSIVKNDAGTEQLVVLQPTASKSGNIIGVIQISTPTAPLKELLLRQLATFIVLSLLAMLLGLFGYLPVLRKTLVPLFNMVETAEQIDAGNLARRFSTAQRQEEIDRLAASFNGMLERLEASFKAEQETKEQMRRFVADASHELRTPLTSIHGFLEVLLRGAANKPEQLNRALQSMHSESERLNKLVQNLLLLARLDRTPHLELLPGNLGELLGEMEPQLRILAGERQVDMEIKEQITCKYDSDQLKQIVLNLFHNAVQHTDSKEGHIRVVLTEEKNWIQLVVSDNGPGIGSEHLPHVFERFYRSDSSRTRKYGGAGLGLSITKAIVDAHGGTIHVTSEEGKGSRFYVRLP 482
BLAST of mRNA_P-wetherbeei_contig5322.1.1 vs. uniprot
Match: A0A6J4V2Q6_9CHLR (Histidine kinase domain-containing protein (Fragment) n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4V2Q6_9CHLR) HSP 1 Score: 190 bits (483), Expect = 6.440e-54 Identity = 117/237 (49.37%), Postives = 152/237 (64.14%), Query Frame = 1
Query: 706 DGMVDQLEETFAAQRRFVADASHELKTPLTAIGGMAEVLRVGADGG---RPELALRTIEKEVDRMSALVADLLTLS--SAENARVETVSNLAPILKEMVAEMSLLHPDRSFAYAGTDELPVTGD---LYRAFRNLLDNAHAYSS--GPVRVDADTRKGRAVICVSDSGPGISPEDLPHIFDRFYRTDASRARKT---GGSGLGLAIVRALVEKQGGTVTAQSTLGQGSTFTVTLPLA 1377
D MVD+LEET AQR+FVADASHEL+TPLTA+GG+ E+L +GAD G + ALR+ +EV+R+S LV DLLTLS A +LA ++ E+ + L +R + LPV GD L + NL NA A+S+ G + + + RA + V+D G GI P DLP IF+RFYR D SRAR++ GSGLGLAI RA+VE GGT+ A+S LGQG+TFT+ LPLA
Sbjct: 1 DHMVDRLEETLKAQRQFVADASHELRTPLTALGGLIEMLLLGADRGDRATSQRALRSAHREVERLSRLVGDLLTLSRLDARPTVERRPLDLAALVAEVGEQTRFLAGEREVLWQVAGPLPVDGDADRLKQVLLNLTGNAVAFSAKTGQIVLRGERVGSRARVEVADDGAGIDPADLPGIFERFYRGDKSRARRSDGGAGSGLGLAIARAIVETHGGTIAARSVLGQGTTFTIELPLA 237
BLAST of mRNA_P-wetherbeei_contig5322.1.1 vs. uniprot
Match: A0A0M2U4D1_9FIRM (Histidine kinase n=1 Tax=Clostridiales bacterium PH28_bin88 TaxID=1605376 RepID=A0A0M2U4D1_9FIRM) HSP 1 Score: 196 bits (497), Expect = 1.300e-53 Identity = 160/479 (33.40%), Postives = 240/479 (50.10%), Query Frame = 1
Query: 1 SIRWLLMLYQIVLLFVTLGVLSLVIHYLLGRFLWQSSQERLRVAVAAGWYAELDDDAPKRRVVGLAAPRSFPSGLEDIARRSAGRELFVRILDLDGNVLAEGGRFRYPP-PIDPEQLNKLKMDERHSVDYFYAGKREWQVLLVPVTDRGNQVGLVQVCGPYRPNRELLAAVDGYLLTGALAAGLLALLVTFGVTRLMFFPLRRLLVATSRVREG-DLSARTGLDQGSNEIFTVAAAFDGMVDQL-------EETFAAQRRFVADASHELKTPLTAIGGMAEVLRVGADGGRPELA--LRTIEKEVDRMSALVADLLTLSSAENARV--ETVSNLAPILKEMVAEMSLLHPDRSFAYAGTDELP---VTGD---LYRAFRNLLDNAHAYSS--GPVRVDADTRKGRAVICVSDSGPGISPEDLPHIFDRFYRTDASRARKTGGSGLGLAIVRALVEKQGGTVTAQSTLGQGSTFTVTLPL 1374
SIRW ++ L F + L+L+ G FL+ L V + D+ R+VGL P S + A + +++++D G V+A + PI P L+ +++ + + G+ ++ P+ +G +G++QV R + + L+ G+ LA + + R P+ R+ A ++E DL R D +E+ +A F+ M+ +L EE +AAQRRFVADASHEL+TPLT I G + LR D E A LR I E +RMS LV+DLL L+ A+ + + + +L E+ + ++ F GT EL V G L + F LLDNA Y+ G V + A T +GR V+ V D+G GI+ EDLPH+FDRFYR D +AR+ GGSGLGLAI + +VE+ G + A+S LG+GS F V LP+
Sbjct: 2 SIRW-----RLTLFFTAVLALTLLAF---GLFLYLLMDYNLNAEVNRAASRKADEVLRSIRIVGL--PLSTQRVVLPDVDVFASPDTYLQVVDTYGEVVARSANLGHQALPITPASLSAVRVGKEF-YETVRVGREALRLYYQPLIFQGEIIGILQVGRSLRSLETAMVRLRWLLILGSGLTVFLAGTTGWWLARAALRPIDRIASAAGAIQEARDLGRRIQYDGPPDEVGRLAGTFNEMLGRLQAAYQHLEEAYAAQRRFVADASHELRTPLTTIRGNVDFLRKMGDADPAERAEVLRDIAGETERMSRLVSDLLALARADAGQHPDKRPVEIRDLLNEVARQARIMAGQVEFRVEGTGELAGVQVLGSEDHLKQLFLILLDNAFKYTQTGGMVTLSAATGEGRLVVQVEDTGVGIAMEDLPHVFDRFYRAD--KARQAGGSGLGLAIAKWIVEEHDGEIEAESVLGEGSIFQVWLPV 467
BLAST of mRNA_P-wetherbeei_contig5322.1.1 vs. uniprot
Match: UPI00110D6288 (HAMP domain-containing histidine kinase n=1 Tax=Paenibacillus mesophilus TaxID=2582849 RepID=UPI00110D6288) HSP 1 Score: 196 bits (498), Expect = 1.310e-53 Identity = 146/424 (34.43%), Postives = 222/424 (52.36%), Query Frame = 1
Query: 193 LAAPRSF---PSGLEDIARRSAGRELFV-----RILDLDGNVLA------EGGRFRYPPPIDPEQLNKLKMDERHSVDYFYAGKREWQVLLVPVTDRGNQVGLVQVCGPYRPNRELLAAVDGYLLTGALAAGLLALLVTFGVTRLMFFPLRRLLVATSRVREGDLSARTGLDQGSNEIFTVAAAFDGMVDQLEETFAAQ-------RRFVADASHELKTPLTAIGGMAEVLRVGA--DGGRPELALRTIEKEVDRMSALVADLLTLSSAENARVETVSN--LAPILKEMVAEMSLLHPDRSFAY---AGTDELPVTGDLYRAFRNLLDNAHAYSS---GPVRVDADTRKGRAVICVSDSGPGISPEDLPHIFDRFYRTDASRARKTGGSGLGLAIVRALVEKQGGTVTAQSTLGQGSTFTVTLP 1371
L+ PR P G+ + R G F+ ++DL GN+ G + P + E L K KM + + G E V+L + RG +G+VQ+ P ++ ++ +L A +L LL V R PL +++ R+ G L R QG E+ +A +F+GM+++LE +FAA+ RRF+ADASHEL+TPLT+I G EVL GA R AL ++ E +R++ LV DLL L+ + A + + L ++KEM ++ LL +R A AGT L + + NL NA ++ G + + +GR + V+D+G GI E LP++FDRFYR+++SR RK GG+GLGL+I R++VE GGT+ A+S +G+GS F V+LP
Sbjct: 60 LSVPRDVLANPDGIPEGNGRGRGPMFFLPDMTLAVIDLQGNITNMSNWPNSGTPPKLPQSVYDEALKK-KMRLNYKITRDDQGN-EQLVVLQQLDMRGRVLGVVQLSTSTAPLNDVAVRQLFTFISLSLLAMILGLLSFIPVMRRTLVPLSKIVDTVGRIDAGSLDERLPARQGQMEVDRLALSFNGMLERLEASFAAEKEAKEQMRRFIADASHELRTPLTSIHGFLEVLLRGAMNQPNRLHKALTSMHSESERINKLVRDLLLLAKMDRAPIMEMHEGALDRLIKEMEPQLRLLAGNREVALRMDAGTVCLYDADKMKQVVLNLFHNAVQHTDPEKGRIAIALTAVEGRIELSVTDNGAGIPEEHLPYVFDRFYRSESSRTRKAGGAGLGLSITRSIVEAHGGTIRAESRVGEGSVFAVSLP 481 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5322.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5322.1.1 >prot_P-wetherbeei_contig5322.1.1 ID=prot_P-wetherbeei_contig5322.1.1|Name=mRNA_P-wetherbeei_contig5322.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=455bp MLYQIVLLFVTLGVLSLVIHYLLGRFLWQSSQERLRVAVAAGWYAELDDDback to top mRNA from alignment at P-wetherbeei_contig5322:703..2085+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5322.1.1 ID=mRNA_P-wetherbeei_contig5322.1.1|Name=mRNA_P-wetherbeei_contig5322.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1383bp|location=Sequence derived from alignment at P-wetherbeei_contig5322:703..2085+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5322:703..2085+ >mRNA_P-wetherbeei_contig5322.1.1 ID=mRNA_P-wetherbeei_contig5322.1.1|Name=mRNA_P-wetherbeei_contig5322.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1365bp|location=Sequence derived from alignment at P-wetherbeei_contig5322:703..2085+ (Phaeothamnion wetherbeei SAG_119_79)back to top |