mRNA_P-wetherbeei_contig53041.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig53041.1.1 vs. uniprot
Match: A0A429X1M6_9BACI (DUF11 domain-containing protein n=2 Tax=Siminovitchia terrae TaxID=1914933 RepID=A0A429X1M6_9BACI) HSP 1 Score: 59.3 bits (142), Expect = 4.540e-7 Identity = 44/130 (33.85%), Postives = 64/130 (49.23%), Query Frame = 1
Query: 7 DLPAGTAGQLTFTGT-FGDRNTPDGHVIDVLAGFTADGAAASAGATVNLTSTTGVF--ARKTLSGPPSPVPGTDVTYFVGYGQT-GNWDSNAGT------VVDQLPHGAAYVSSTNGGVYDPVAETVTWT 366
++ AG+ GQL F + TP+G + F +D A+ A + T + +K + P P+P T+V Y + + T G+ + N +VDQLP GA YVSS+ GVYD TVTWT
Sbjct: 457 NIDAGSTGQLRINNLKFPNYTTPNGTEAAIKTEFISDEASGKAEDVIVSTKAKANWELTKKKIKPHPEPMPNTNVVYEIVFRNTKGDGNENGSLQLEDAMIVDQLPEGAEYVSSSPEGVYDTKKHTVTWT 586
BLAST of mRNA_P-wetherbeei_contig53041.1.1 vs. uniprot
Match: A0A1V5RR06_9CHLR (Serine-aspartate repeat-containing protein D n=1 Tax=Chloroflexi bacterium ADurb.Bin325 TaxID=1852859 RepID=A0A1V5RR06_9CHLR) HSP 1 Score: 54.3 bits (129), Expect = 2.360e-5 Identity = 39/109 (35.78%), Postives = 52/109 (47.71%), Query Frame = 1
Query: 196 PSPVP-GTDVTYFVGYGQTGNWDSNAGTVVDQLPHGAAYVSSTNGGVYDPVAETVTWTFDRNVYPGNGSLSSGCGITGAGTPWCNSVTVRYSPSSFGPGDIVTNAMTVT 519
P PV G+++TY V + GN + T+VD LP A+VS+TNGGVYD A TVTW GS VTV + + G +TNA+ +T
Sbjct: 482 PEPVDAGSELTYSVDWTVGGNAYAEDVTIVDTLPQEVAFVSATNGGVYDAGAHTVTWLLGTVTPAATGSYE---------------VTVEVASPLYN-GTTLTNAVVIT 574
BLAST of mRNA_P-wetherbeei_contig53041.1.1 vs. uniprot
Match: UPI000A1909DB (LPXTG cell wall anchor domain-containing protein n=1 Tax=Leifsonia sp. NCR5 TaxID=1978342 RepID=UPI000A1909DB) HSP 1 Score: 53.9 bits (128), Expect = 3.200e-5 Identity = 43/122 (35.25%), Postives = 56/122 (45.90%), Query Frame = 1
Query: 19 GTAGQLTFTGTFGDRNTPDGHVIDVLAGFTADGAAASAGATVNLTSTTGVFARKTLSGPPSPVPGTDVTYFVGYG------QTGNWDSNAGTVVDQLPHGAAYVSSTNGGVYDPVAETVTWT 366
GT T + D PDG V + TA A + + + R+TL P PV TY + YG G D +VD LP G +VS+++GGVYDP+AETVTWT
Sbjct: 147 GTTFPATIRLGYADAAAPDGQVTTQVT--TARPVVVEAKSALTVVKQMKTPIRETLVRPDEPV-----TYAI-YGCNPNAASLGALDYTDLVLVDSLPKGTTFVSASDGGVYDPIAETVTWT 260
BLAST of mRNA_P-wetherbeei_contig53041.1.1 vs. uniprot
Match: A0A2N1XD67_9GAMM (Uncharacterized protein (Fragment) n=1 Tax=Gammaproteobacteria bacterium HGW-Gammaproteobacteria-7 TaxID=2013803 RepID=A0A2N1XD67_9GAMM) HSP 1 Score: 53.5 bits (127), Expect = 3.990e-5 Identity = 48/146 (32.88%), Postives = 69/146 (47.26%), Query Frame = 1
Query: 4 GDLPAGTAGQLTFTGTFGDRNTPDGHVIDVLAGFTADGAAASAGATVNLTS-------------TTGVFARKTLS----GPPSPVP-GTDVTYFVGYGQTGNWDSNAGTVVDQLPHGAAYVSSTNGGVYDPVAETVTWTFDRNVYP 387
G L G+AGQL V+D+ F A + G T++ T+ TT VFA+ L+ P PV G + Y + + GN + T+VD LP+ +V++++GGVY+PVA TVTWT NV P
Sbjct: 301 GTLAIGSAGQLQV-------------VVDLDPVFPAGTTTLTNGVTISTTTPGELDTSDNADTDTTDVFAQVELAIAKAAAPEPVDAGAPLNYTIDWTVGGNAYAPGVTIVDTLPNLVTFVAASDGGVYNPVAHTVTWTLG-NVTP 432
BLAST of mRNA_P-wetherbeei_contig53041.1.1 vs. uniprot
Match: A0A2N2PZ64_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium HGW-Chloroflexi-1 TaxID=2013723 RepID=A0A2N2PZ64_9CHLR) HSP 1 Score: 53.5 bits (127), Expect = 4.370e-5 Identity = 48/146 (32.88%), Postives = 69/146 (47.26%), Query Frame = 1
Query: 4 GDLPAGTAGQLTFTGTFGDRNTPDGHVIDVLAGFTADGAAASAGATVNLTS-------------TTGVFARKTLS----GPPSPVP-GTDVTYFVGYGQTGNWDSNAGTVVDQLPHGAAYVSSTNGGVYDPVAETVTWTFDRNVYP 387
G L G+AGQL V+D+ F A + G T++ T+ TT VFA+ L+ P PV G + Y + + GN + T+VD LP+ +V++++GGVY+PVA TVTWT NV P
Sbjct: 392 GTLAIGSAGQLQV-------------VVDLDPVFPAGTTTLTNGVTISTTTPGELDTSDNADTDTTDVFAQVELAIAKAAAPEPVDAGAPLNYTIDWTVGGNAYAPGVTIVDTLPNLVTFVAASDGGVYNPVAHTVTWTLG-NVTP 523 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53041.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig53041.1.1 >prot_P-wetherbeei_contig53041.1.1 ID=prot_P-wetherbeei_contig53041.1.1|Name=mRNA_P-wetherbeei_contig53041.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=176bp AGDLPAGTAGQLTFTGTFGDRNTPDGHVIDVLAGFTADGAAASAGATVNLback to top mRNA from alignment at P-wetherbeei_contig53041:1..528- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig53041.1.1 ID=mRNA_P-wetherbeei_contig53041.1.1|Name=mRNA_P-wetherbeei_contig53041.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig53041:1..528- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig53041:1..528- >mRNA_P-wetherbeei_contig53041.1.1 ID=mRNA_P-wetherbeei_contig53041.1.1|Name=mRNA_P-wetherbeei_contig53041.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig53041:1..528- (Phaeothamnion wetherbeei SAG_119_79)back to top |