mRNA_P-wetherbeei_contig53.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig53.4.1 vs. uniprot
Match: A0A835ZI64_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI64_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 1.950e-18 Identity = 39/68 (57.35%), Postives = 47/68 (69.12%), Query Frame = 1
Query: 13 GLPDVPRSRDDIHIVFSTDCSPYQDWQAYLLFNSARVAAHNGRITRLASGCSLEDEKRLATLHQKLPP 216
G+ VPR D+H+VFST+CS YQDWQ+ LLF SA A H G ITRLA GCS E + + LHQ +PP
Sbjct: 33 GITAVPRDEHDVHVVFSTECSSYQDWQSLLLFFSATRAGHKGPITRLAGGCSPEKQTEILKLHQHMPP 100
BLAST of mRNA_P-wetherbeei_contig53.4.1 vs. uniprot
Match: A0A7S2XWN9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWN9_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 8.910e-18 Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 1
Query: 28 PRSRDDIHIVFSTDCSPYQDWQAYLLFNSARVAAHNGRITRLASGCSLEDEKRLATLHQK 207
P+ RDDIH+VFSTDCS YQ+WQ+ +L +SA + GR+TRLASGCS E+E L +H K
Sbjct: 62 PKDRDDIHLVFSTDCSGYQNWQSIILMHSAMLIDQPGRVTRLASGCSEEEEAELRAMHAK 121
BLAST of mRNA_P-wetherbeei_contig53.4.1 vs. uniprot
Match: A0A836CDP3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDP3_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 6.210e-17 Identity = 39/71 (54.93%), Postives = 46/71 (64.79%), Query Frame = 1
Query: 1 GVIDGLPDVPRSRDDIHIVFSTDCSPYQDWQAYLLFNSARVAAHNGRITRLASGCSLEDEKRLATLHQKLP 213
G+ G+P VPR DDIHIVFSTDCS YQ+WQ+ L F SA A G +TRLASGCS L +H +P
Sbjct: 2 GIAPGIPSVPRHYDDIHIVFSTDCSDYQNWQSLLFFYSAARAGQKGPVTRLASGCSEAQMAELRDVHALMP 72
BLAST of mRNA_P-wetherbeei_contig53.4.1 vs. uniprot
Match: D8LU90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU90_ECTSI) HSP 1 Score: 79.0 bits (193), Expect = 2.200e-15 Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = 1
Query: 1 GVIDGLPDVPRSRDDIHIVFSTDCSPYQDWQAYLLFNSARVAAHNGRITRLASGCSLEDEKRLATLHQKLP 213
G+ G+ P S DDIH+VFSTDCSPYQ++QA +LF+SA + GR+TR+ASGC+ ++ L + P
Sbjct: 68 GIAPGIAAKPASADDIHVVFSTDCSPYQNYQATMLFHSAEMVGQKGRVTRVASGCTRDERLELEVFMMRQP 138
BLAST of mRNA_P-wetherbeei_contig53.4.1 vs. uniprot
Match: A0A7S3HPB4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPB4_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 2.670e-14 Identity = 33/66 (50.00%), Postives = 44/66 (66.67%), Query Frame = 1
Query: 22 DVPRSRDDIHIVFSTDCSPYQDWQAYLLFNSARVAAHNGRITRLASGCSLEDEKRLATLHQKLPPQ 219
+ P +H+VFSTDCS YQ+WQ LLF+SA+V GRITR+ASGC + L L++KL P+
Sbjct: 79 EAPEEDGQMHVVFSTDCSGYQNWQTLLLFHSAQVVGQKGRITRIASGCDATQQAELTALYKKLYPK 144
BLAST of mRNA_P-wetherbeei_contig53.4.1 vs. uniprot
Match: D7G4L7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4L7_ECTSI) HSP 1 Score: 74.3 bits (181), Expect = 9.570e-14 Identity = 33/68 (48.53%), Postives = 46/68 (67.65%), Query Frame = 1
Query: 1 GVIDGLPDVPRSRDDIHIVFSTDCSPYQDWQAYLLFNSARVAAHNGRITRLASGCSLEDEKRLATLHQ 204
G+ G P P DDIH+VFS+DC+ YQ WQA +LF+SA ++ H G IT+L SGCS E++ + H+
Sbjct: 154 GLGPGAPGFPLGEDDIHVVFSSDCTNYQAWQAVVLFHSAILSGHTGPITQLISGCSDEEQAEAESRHE 221
BLAST of mRNA_P-wetherbeei_contig53.4.1 vs. uniprot
Match: A0A7S3ZM89_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZM89_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 5.470e-12 Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 1
Query: 46 IHIVFSTDCSPYQDWQAYLLFNSARVAAHNGRITRLASGCSLEDEKRL 189
+ +VFSTDC+PYQDWQ+ ++FNSA V H G +TR+ASGCS E E L
Sbjct: 106 VRVVFSTDCTPYQDWQSEVVFNSADVVGHRGPVTRIASGCSPEKEAAL 153
BLAST of mRNA_P-wetherbeei_contig53.4.1 vs. uniprot
Match: A0A7S2Q198_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q198_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 1.140e-11 Identity = 31/52 (59.62%), Postives = 36/52 (69.23%), Query Frame = 1
Query: 46 IHIVFSTDCSPYQDWQAYLLFNSARVAAHNGRITRLASGCSLEDEKRLATLH 201
IHIVFSTDCSPYQ WQ+Y LF S GRITR+ASGC+ E+E + H
Sbjct: 162 IHIVFSTDCSPYQHWQSYALFLSTLKIRQPGRITRIASGCTEEEELSIRKWH 213
BLAST of mRNA_P-wetherbeei_contig53.4.1 vs. uniprot
Match: F0YDA7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDA7_AURAN) HSP 1 Score: 67.0 bits (162), Expect = 3.470e-11 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 1
Query: 31 RSRDDIHIVFSTDCSPYQDWQAYLLFNSARVAAHNGRITRLASGCSLEDEKRLATLH 201
R D+ H+VFSTDC YQDWQ+ ++++SA +A GR+TR+ASGC+ + +L H
Sbjct: 24 RPADEFHVVFSTDCGKYQDWQSEVVYHSATLAGQPGRVTRIASGCTDAEAAKLRARH 80
BLAST of mRNA_P-wetherbeei_contig53.4.1 vs. uniprot
Match: A0A482SH38_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SH38_9ARCH) HSP 1 Score: 66.2 bits (160), Expect = 3.530e-11 Identity = 30/64 (46.88%), Postives = 40/64 (62.50%), Query Frame = 1
Query: 19 PDVPRSRDDIHIVFSTDCSPYQDWQAYLLFNSARVAAHNGRITRLASGCSLEDEKRLATLHQKL 210
P P + + VFSTDC+PYQDWQ+ LF+SA G ITR+ASGC ++ L TL++ L
Sbjct: 96 PPTPTNHAHFYTVFSTDCTPYQDWQSIFLFHSALRVKQPGIITRIASGCDQAQQEHLTTLYKTL 159 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig53.4.1 >prot_P-wetherbeei_contig53.4.1 ID=prot_P-wetherbeei_contig53.4.1|Name=mRNA_P-wetherbeei_contig53.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=79bp GVIDGLPDVPRSRDDIHIVFSTDCSPYQDWQAYLLFNSARVAAHNGRITRback to top mRNA from alignment at P-wetherbeei_contig53:10398..10634+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig53.4.1 ID=mRNA_P-wetherbeei_contig53.4.1|Name=mRNA_P-wetherbeei_contig53.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=237bp|location=Sequence derived from alignment at P-wetherbeei_contig53:10398..10634+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig53:10398..10634+ >mRNA_P-wetherbeei_contig53.4.1 ID=mRNA_P-wetherbeei_contig53.4.1|Name=mRNA_P-wetherbeei_contig53.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=237bp|location=Sequence derived from alignment at P-wetherbeei_contig53:10398..10634+ (Phaeothamnion wetherbeei SAG_119_79)back to top |