mRNA_P-wetherbeei_contig52880.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52880.1.1 vs. uniprot
Match: A0A6L7YQS5_9CHLR (Uma2 family endonuclease n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L7YQS5_9CHLR) HSP 1 Score: 140 bits (354), Expect = 1.160e-39 Identity = 70/146 (47.95%), Postives = 99/146 (67.81%), Query Frame = 1
Query: 1 GVEHGEVQLALGSLIRVFLLSNRIGRAV-TESSIVTERKPDTVRGPDVSYYSKERLPLDKRVVGYHDEVPDLCVEVVSPSNTMKQLKAKAKEYLFAGVRLVWIIDPEDRTATVIADPLESRTLEADATLDGGAVLPGFSCKVSDLF 435
GVEHG++ + LG +R F+ R+G+ ++ ++ ER PDTVR PD+ + S E+ PLD+R+VGY + VPDL VE+VSPS++ + + +A+ +L GVRLVW+ PE+RT V + TL TLDGG VLPGFSC VSD+F
Sbjct: 38 GVEHGQIVMNLGGELRNFIRPRRLGKLFGSDGGVLLERGPDTVREPDIGFISAEKSPLDERIVGYANVVPDLAVEIVSPSDSRQSVHERAQMWLNFGVRLVWVGFPEERTVDVYPEGGTMFTLREGDTLDGGEVLPGFSCAVSDVF 183
BLAST of mRNA_P-wetherbeei_contig52880.1.1 vs. uniprot
Match: A0A6N8Z7J1_9CHLR (Uma2 family endonuclease n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6N8Z7J1_9CHLR) HSP 1 Score: 140 bits (354), Expect = 1.310e-39 Identity = 73/146 (50.00%), Postives = 101/146 (69.18%), Query Frame = 1
Query: 1 GVEHGEVQLALGSLIRVFLLSNRIGRAV-TESSIVTERKPDTVRGPDVSYYSKERLPLDKRVVGYHDEVPDLCVEVVSPSNTMKQLKAKAKEYLFAGVRLVWIIDPEDRTATVIADPLESRTLEADATLDGGAVLPGFSCKVSDLF 435
G+EHGE+ + LG ++R + NR+GR V +++ I ER PDTVR PD+++ S E+L LD RV GY + VPDL VE++SP++ + KA+ +L GVRLV +IDP+ RT TV+ ++TL TLDGG VLPGFSC VSD+F
Sbjct: 42 GIEHGEIVMNLGGMMRNVVRPNRLGRVVGSDAGIRLERNPDTVREPDIAFISAEKLSLDTRVRGYAEVVPDLVVEIISPNDRPVAMYDKAQMWLRFGVRLVLLIDPDVRTVTVMPQDGPAQTLTDADTLDGGDVLPGFSCAVSDIF 187
BLAST of mRNA_P-wetherbeei_contig52880.1.1 vs. uniprot
Match: A0A7Y5SGW6_9BACT (Uma2 family endonuclease n=1 Tax=Pirellulales bacterium TaxID=2715253 RepID=A0A7Y5SGW6_9BACT) HSP 1 Score: 129 bits (324), Expect = 3.770e-35 Identity = 71/144 (49.31%), Postives = 95/144 (65.97%), Query Frame = 1
Query: 10 HGEVQLALGSLIRVFLLSNRIGR-AVTESSIVTERKPDTVRGPDVSYYSKERLP-LDKRVVGYHDEVPDLCVEVVSPSNTMKQLKAKAKEYLFAGVRLVWIIDPEDRTATVIADPLESRTLEADATLDGGAVLPGFSCKVSDLF 435
HGEV +ALG+L+ VF+ S +GR AV + ++TER PDTVRGPDV+++S ERL L + + PDL VEVVSP +T +++ K +L GVRLVW++DPE+R ATV E R L L G V+PGFSC+V +LF
Sbjct: 42 HGEVCIALGALLHVFVKSRGLGRVAVNDPGVITERDPDTVRGPDVAFWSPERLSELPNK---FTHVPPDLAVEVVSPRDTHREVLEKVLHFLDHGVRLVWVVDPEERIATVYRSRHEVRILGETEELRGEDVVPGFSCRVGELF 182
BLAST of mRNA_P-wetherbeei_contig52880.1.1 vs. uniprot
Match: A0A5C1A876_9BACT (Uma2 family endonuclease n=1 Tax=Limnoglobus roseus TaxID=2598579 RepID=A0A5C1A876_9BACT) HSP 1 Score: 127 bits (319), Expect = 2.140e-34 Identity = 67/143 (46.85%), Postives = 92/143 (64.34%), Query Frame = 1
Query: 10 HGEVQLALGSLIRVFLLSNRIGRAVTESSIVTERKPDTVRGPDVSYYSKERLP-LDKRVVGYHDEVPDLCVEVVSPSNTMKQLKAKAKEYLFAGVRLVWIIDPEDRTATVIADPLESRTLEADATLDGGAVLPGFSCKVSDLF 435
HG VQ + L+ F+ +NR+G VTES V ER PDTVRGPDVS+YS R P L + + PDL VEV+SPS+ +++ K +EYL GVR+VW++DP+ +T TV A L ++ TLD VLPGF+C+++D F
Sbjct: 43 HGFVQANIAILLGGFVKTNRLGWVVTESGTVLERDPDTVRGPDVSFYSITRHPDLPDE---WFEIPPDLAVEVLSPSDRRGRVREKVREYLANGVRIVWLVDPDPQTVTVYAGTLRGVEFDSTDTLDAADVLPGFTCQIADFF 182
BLAST of mRNA_P-wetherbeei_contig52880.1.1 vs. uniprot
Match: A0A6N8VW32_9CHLR (Uma2 family endonuclease n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6N8VW32_9CHLR) HSP 1 Score: 126 bits (316), Expect = 6.620e-34 Identity = 74/149 (49.66%), Postives = 96/149 (64.43%), Query Frame = 1
Query: 1 GVEHGEVQLALGSLIRVFLLSNRIGR-AVTESSIVTERKPDTVRGPDVSYYSKERLPLDKRVVGYHDEVPDLCVEVVSPSNTMKQLKAKAKEYLFAGVRLVWIIDPEDRTATVIADPLES---RTLEADATLDGGAVLPGFSCKVSDLF 435
G+EHGE+ A G+ +R F R+GR AV + I ER PDTVR PDV+++S RLPLD+R GY + +P+L VEV SP ++ +QL KA+ +L GVRLVW++ P++R V A E R EAD LDG VLPGF C VS LF
Sbjct: 39 GLEHGEIATAFGAELRGFAKPRRLGRVAVGDPGIKIERDPDTVRAPDVAFFSARRLPLDQRNPGYAEVIPELVVEVKSPRDSREQLNDKAEMWLRHGVRLVWLVYPDERA--VEAHHTEQGVIRYQEADK-LDGMDVLPGFRCAVSQLF 184
BLAST of mRNA_P-wetherbeei_contig52880.1.1 vs. uniprot
Match: A0A7W0A161_9CHLR (Uma2 family endonuclease n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0A161_9CHLR) HSP 1 Score: 125 bits (314), Expect = 1.290e-33 Identity = 62/144 (43.06%), Postives = 93/144 (64.58%), Query Frame = 1
Query: 10 HGEVQLALGSLIRVFLLSNRIGRA-VTESSIVTERKPDTVRGPDVSYYSKERLPLDKRVVGYHDEVPDLCVEVVSPSNTMKQLKAKAKEYLFAGVRLVWIIDPEDRTATVIADPLESRTLEADATLDGGAVLPGFSCKVSDLFM 438
HGE+ + +G +R +++ NR+G +E+ + R+PDT+ PDVS+ + R P + VG+ + VPDL VEVVSPS+ + + AK YL AGVRLVW+++P RT TV A R ++ D TLDGG VLP F+ V+++F+
Sbjct: 39 HGEIAMTIGFHLRNYVVPNRLGTVWASETGFILRREPDTLLAPDVSFVATGRRPPVDQRVGFVNVVPDLVVEVVSPSDRRRYVSAKVTAYLDAGVRLVWVVEPRTRTVTVHASGQPERVVDEDGTLDGGDVLPDFTLAVAEVFV 182
BLAST of mRNA_P-wetherbeei_contig52880.1.1 vs. uniprot
Match: A0A6B1D5K5_9CHLR (Uma2 family endonuclease n=1 Tax=Caldilineaceae bacterium SB0661_bin_32 TaxID=2605255 RepID=A0A6B1D5K5_9CHLR) HSP 1 Score: 125 bits (313), Expect = 1.820e-33 Identity = 63/146 (43.15%), Postives = 95/146 (65.07%), Query Frame = 1
Query: 1 GVEHGEVQLALGSLIRVFLLSNRIGRAV-TESSIVTERKPDTVRGPDVSYYSKERLPLDKRVVGYHDEVPDLCVEVVSPSNTMKQLKAKAKEYLFAGVRLVWIIDPEDRTATVIADPLESRTLEADATLDGGAVLPGFSCKVSDLF 435
G+ HGE+ + LG +R F+ R+GR V ++S ++ ER PDTVR PD+++ S ++LPL+ R+ G + PDL VE+VSPS+ +++ KA+ ++ GV LVW++DPE+R V +L + LDGG VLPGFS V D+F
Sbjct: 38 GLTHGEIVMNLGGALRNFVRPRRLGRLVGSDSGMMLERDPDTVREPDIAFISAQKLPLNVRLSGCFEGAPDLAVEIVSPSDGPREVYHKARMWISFGVPLVWVVDPENRAVEVHRPNQPLLSLTENEILDGGEVLPGFSYPVRDVF 183
BLAST of mRNA_P-wetherbeei_contig52880.1.1 vs. uniprot
Match: A0A845CVV1_9CHLR (Uma2 family endonuclease n=1 Tax=Caldilineaceae bacterium SB0662_bin_25 TaxID=2605257 RepID=A0A845CVV1_9CHLR) HSP 1 Score: 124 bits (312), Expect = 2.440e-33 Identity = 65/146 (44.52%), Postives = 93/146 (63.70%), Query Frame = 1
Query: 1 GVEHGEVQLALGSLIRVFLLSNRIGRAV-TESSIVTERKPDTVRGPDVSYYSKERLPLDKRVVGYHDEVPDLCVEVVSPSNTMKQLKAKAKEYLFAGVRLVWIIDPEDRTATVIADPLESRTLEADATLDGGAVLPGFSCKVSDLF 435
G+ HG+ + L L+ F+ ++G + ++ + E++PDTVR PDV++ S RLPLD+ V GY D PDL +E+VSPS++ +QL KA+ ++ GV LVW +DP+ RT V L D TLDGG VLPGF+C V+DLF
Sbjct: 38 GIRHGKTVVNLIVLLAGFVEPRQMGTILASDVGFLLEKEPDTVREPDVAFISAHRLPLDQDVPGYFDGPPDLAIEIVSPSDSPRQLFDKARMWISFGVPLVWTVDPQARTIDVHQPNQPLIRLSTDDTLDGGQVLPGFTCTVADLF 183
BLAST of mRNA_P-wetherbeei_contig52880.1.1 vs. uniprot
Match: A0A6I4ZB14_9CHLR (Uma2 family endonuclease n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A6I4ZB14_9CHLR) HSP 1 Score: 124 bits (312), Expect = 3.690e-33 Identity = 64/146 (43.84%), Postives = 92/146 (63.01%), Query Frame = 1
Query: 1 GVEHGEVQLALGSLIRVFLLSNRIGRAV-TESSIVTERKPDTVRGPDVSYYSKERLPLDKRVVGYHDEVPDLCVEVVSPSNTMKQLKAKAKEYLFAGVRLVWIIDPEDRTATVIADPLESRTLEADATLDGGAVLPGFSCKVSDLF 435
G EHGE+ + LG+ + F+ +GR + + S + +R PDTVR PDV++++ +PLD RV GY + PDL VE+VSPS++ +++ KA +L GVRLVW++ PE RT V E TL LDG VL GF+C+VS +F
Sbjct: 46 GQEHGEIAMRLGAALLGFIEPRGLGRVMGSGSGVWLDRDPDTVREPDVAFFAVGTIPLDARVTGYAEVAPDLVVEIVSPSDSRREVHDKAHMWLNHGVRLVWVVQPETRTVDVYRPDGEIATLGEQDALDGQDVLSGFTCEVSAIF 191
BLAST of mRNA_P-wetherbeei_contig52880.1.1 vs. uniprot
Match: A0A7W1C5L3_9BACT (Uma2 family endonuclease n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7W1C5L3_9BACT) HSP 1 Score: 123 bits (309), Expect = 7.740e-33 Identity = 63/145 (43.45%), Postives = 87/145 (60.00%), Query Frame = 1
Query: 1 GVEHGEVQLALGSLIRVFLLSNRIGRAV-TESSIVTERKPDTVRGPDVSYYSKERLPLDKRVVGYHDEVPDLCVEVVSPSNTMKQLKAKAKEYLFAGVRLVWIIDPEDRTATVIADPLESRTLEADATLDGGAVLPGFSCKVSDL 432
G EHG + + + SL+ F+ +G V E+ V KP TVR PDV++ + RL D VG+ PDL VE+VSPSNT+ +++ K +YL AG RLVW++DP R+ T E R L + +DGGAVLPGF K+S+L
Sbjct: 42 GFEHGRIAVQIASLLHAFVRERELGTVVGAETGFVLHDKPPTVRAPDVAFVADGRLASDP--VGFAPLAPDLAVEIVSPSNTVSEIQGKVVDYLDAGTRLVWVVDPRYRSITAYLSRQEIRLLTEEEEIDGGAVLPGFRIKISEL 184 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52880.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52880.1.1 >prot_P-wetherbeei_contig52880.1.1 ID=prot_P-wetherbeei_contig52880.1.1|Name=mRNA_P-wetherbeei_contig52880.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=147bp GVEHGEVQLALGSLIRVFLLSNRIGRAVTESSIVTERKPDTVRGPDVSYYback to top mRNA from alignment at P-wetherbeei_contig52880:1..441+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52880.1.1 ID=mRNA_P-wetherbeei_contig52880.1.1|Name=mRNA_P-wetherbeei_contig52880.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=441bp|location=Sequence derived from alignment at P-wetherbeei_contig52880:1..441+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52880:1..441+ >mRNA_P-wetherbeei_contig52880.1.1 ID=mRNA_P-wetherbeei_contig52880.1.1|Name=mRNA_P-wetherbeei_contig52880.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=441bp|location=Sequence derived from alignment at P-wetherbeei_contig52880:1..441+ (Phaeothamnion wetherbeei SAG_119_79)back to top |