mRNA_P-wetherbeei_contig5284.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5284.1.1 vs. uniprot
Match: A0A6H5K0E6_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0E6_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 1.190e-19 Identity = 65/150 (43.33%), Postives = 84/150 (56.00%), Query Frame = 1
Query: 19 DASR-RSGGGDDLMSRLMAKTYVQVRVRADGPTKVLELLEQGGDDXXXXXXXXXPASVLSLPHFGAGGGTGGSMLSLSHRGGGGRDTVVATA-RSPVLTLFMAQAYSLGVSVVDDAPKEVLYVYLEGLKFAMTKTREHRTASLTVEGLQV 462
DAS R GG+ +MSRL AK YV VRVRADGPTKVLEL+E+ G++ A++ +GGG G G T A S V +++M Q +GVS+VDD P E+LY G+K +T T HR S+TV+GLQV
Sbjct: 1738 DASALRLEGGEAIMSRLRAKVYVNVRVRADGPTKVLELVEEAGEEMEDDDGAVA-AALGKKGRENSGGGP-------ESEGAGTLATAAGAADASRVTSVYMLQMAGIGVSLVDDRPLELLYFLACGIKADITATARHRMLSITVDGLQV 1879
BLAST of mRNA_P-wetherbeei_contig5284.1.1 vs. uniprot
Match: D8LME2_ECTSI (SHR-BD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME2_ECTSI) HSP 1 Score: 69.3 bits (168), Expect = 8.310e-11 Identity = 54/137 (39.42%), Postives = 71/137 (51.82%), Query Frame = 1
Query: 7 GGEEDASRRSGGGDDLMSRLMAKTYVQVRVRADGPTKVLELLEQGGDDXXXXXXXXXPASVLSLPHFGAGGGTGGSMLSLSHRGGGGRDTVVATARSPVLTLFMAQAYSLGVSVVDDAPKEVLYVYLEGLKFAMTKT 417
GG + ++ R GG+ +MSRL AK YV VRVRADGPTKVLEL+E+ G++ XXXXXXX S V +++M Q +GVS+VDD P E+LY G+K +T T
Sbjct: 1408 GGGDVSAPRLEGGEAIMSRLRAKVYVNVRVRADGPTKVLELVEEAGEEVEXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXDASSVTSVYMLQMAGIGVSLVDDRPLELLYFLACGIKADITAT 1538
BLAST of mRNA_P-wetherbeei_contig5284.1.1 vs. uniprot
Match: A0A3R7JGP2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JGP2_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 2.460e-9 Identity = 46/144 (31.94%), Postives = 69/144 (47.92%), Query Frame = 1
Query: 49 DLMSRLM-AKTYVQVRVRADGPTKVLELLEQGGDDXXXXXXXXXPASVLSLPHFGAGGGTGGSMLSLSHRGGGGRDTVVATARSPVLTLFMAQAYSL-----GVSVVDDAPKEVLYVYLEGLKFAMTKTREHRTASLTVEGLQV 462
DL+ + AKTYV VR+RADGPTKVLEL E G +D +S S S S T T+ S + +L A+ L GVS V++ P E++Y+YL G+ ++ + ++T++ LQ+
Sbjct: 347 DLLPLIQNAKTYVHVRIRADGPTKVLELFEGGEEDFDEKESKYELSSAASA-----------SSES---------PTASETSMSAIESLTSGMAFHLRIDGFGVSCVNELPMELVYIYLGGISLRYSRVNSNMRMNITLDDLQI 470
BLAST of mRNA_P-wetherbeei_contig5284.1.1 vs. uniprot
Match: A0A3F2RL93_9STRA (Mannosyltransferase n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RL93_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 2.500e-9 Identity = 46/144 (31.94%), Postives = 69/144 (47.92%), Query Frame = 1
Query: 49 DLMSRLM-AKTYVQVRVRADGPTKVLELLEQGGDDXXXXXXXXXPASVLSLPHFGAGGGTGGSMLSLSHRGGGGRDTVVATARSPVLTLFMAQAYSL-----GVSVVDDAPKEVLYVYLEGLKFAMTKTREHRTASLTVEGLQV 462
DL+ + AKTYV VR+RADGPTKVLEL E G +D +S S S S T T+ S + +L A+ L GVS V++ P E++Y+YL G+ ++ + ++T++ LQ+
Sbjct: 440 DLLPLIQNAKTYVHVRIRADGPTKVLELFEGGEEDFDEKESKYELSSAASA-----------SSES---------PTASETSMSAIESLTSGMAFHLRIDGFGVSCVNELPMELVYIYLGGISLRYSRVNSNMRMNITLDDLQI 563
BLAST of mRNA_P-wetherbeei_contig5284.1.1 vs. uniprot
Match: A0A2P4WYN4_9STRA (Vacuolar protein sorting-associated protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WYN4_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 8.700e-9 Identity = 46/146 (31.51%), Postives = 69/146 (47.26%), Query Frame = 1
Query: 49 DLMSRLM-AKTYVQVRVRADGPTKVLELLEQGGDDXXXXXXXXXPASVLSLPHFGAGGGTGGSMLSLSHRGGGGRDTVVATARSP--VLTLFMAQAYSL-----GVSVVDDAPKEVLYVYLEGLKFAMTKTREHRTASLTVEGLQV 462
DL+ ++ AKTYV VR+RADGPTKVLEL E G +D S LS D+ A+ S V +L A+ L GVS V++ P E++Y+YL G+ ++ + ++T++ LQ+
Sbjct: 1677 DLLPQVQNAKTYVHVRIRADGPTKVLELFEGGEEDFDEKD----------------------SKYELSSTASASSDSPTASEASTNAVESLTSGMAFHLRVDGVGVSCVNELPMELVYIYLGGISLHYSRVNSNMRMNITLDDLQI 1800
BLAST of mRNA_P-wetherbeei_contig5284.1.1 vs. uniprot
Match: A0A835ZA73_9STRA (PH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA73_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 5.480e-8 Identity = 61/148 (41.22%), Postives = 75/148 (50.68%), Query Frame = 1
Query: 19 DASRRSGGGDDLMSRLMAKTYVQVRVRADGPTKVLELLEQGGDDXXXXXXXXXPASVLSLPHFGAGGGTGGSMLSLSHRGGGGRDTVVATARSPVLTLFMAQAYSLGVSVVDDAPKEVLYVYLEGLKFAMTKTREHRTASLTVEGLQV 462
+A GGG D + A+T V+VRVRADGPTKVLEL E G XXXXXXXXX G A R V+T+ + LGVS+VDDAPKE++YVY+EG++ SLTVE LQ+
Sbjct: 1650 NAGASGGGGGDTAADF-ARTTVRVRVRADGPTKVLELSEDGXXXXXXXXXXXXXXXXXXXX---------------------GDPAAAAVTR--VVTVNIR---GLGVSLVDDAPKELIYVYMEGVQ------------SLTVERLQI 1758
BLAST of mRNA_P-wetherbeei_contig5284.1.1 vs. uniprot
Match: A0A6A3U5U2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3U5U2_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 7.570e-8 Identity = 43/138 (31.16%), Postives = 64/138 (46.38%), Query Frame = 1
Query: 70 AKTYVQVRVRADGPTKVLELLEQGGDDXXXXXXXXXPASVLSLPHFGAGGGTGGSMLSLSHRGGGGRDTVVATARSP----VLTLFMA---QAYSLGVSVVDDAPKEVLYVYLEGLKFAMTKTREHRTASLTVEGLQV 462
AKTYV VR+RADGPTKVLEL E G +D S LS D+ A+ S LT MA + +G+S V++ P E++YVY+ G+ ++ + ++T++ LQ+
Sbjct: 2937 AKTYVHVRIRADGPTKVLELFEGGEEDFDEKE----------------------SKYELSSTASASSDSPTASETSTNAFDSLTSGMALHLRVDGIGISCVNELPMELVYVYMGGISLHYSRVNSNMRMNITLDDLQI 3052
BLAST of mRNA_P-wetherbeei_contig5284.1.1 vs. uniprot
Match: A0A8J5JDU7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5JDU7_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 1.400e-7 Identity = 43/146 (29.45%), Postives = 70/146 (47.95%), Query Frame = 1
Query: 49 DLMSRLM-AKTYVQVRVRADGPTKVLELLEQGGDDXXXXXXXXXPASVLSLPHFGAGGGTGGSMLSLSHRGGGGRDTVVATARSPV----LTLFMA---QAYSLGVSVVDDAPKEVLYVYLEGLKFAMTKTREHRTASLTVEGLQV 462
DL+ ++ AKTYV VR+RADGPTKVLEL E G +D +S S+ D+ A+ S LT MA + +G+S V++ P E++Y+YL G+ ++ + ++T++ +Q+
Sbjct: 2517 DLVPQVQNAKTYVHVRIRADGPTKVLELFEGGEEDFDERENKYELSSTASVSS----------------------DSPTASETSATAFESLTSGMALHLRVDGVGISCVNELPMELVYIYLGGISLHYSRVNSNMRMNVTLDDVQI 2640
BLAST of mRNA_P-wetherbeei_contig5284.1.1 vs. uniprot
Match: G4YH06_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YH06_PHYSP) HSP 1 Score: 60.1 bits (144), Expect = 1.400e-7 Identity = 43/146 (29.45%), Postives = 69/146 (47.26%), Query Frame = 1
Query: 49 DLMSRLM-AKTYVQVRVRADGPTKVLELLEQGGDDXXXXXXXXXPASVLSLPHFGAGGGTGGSMLSLSHRGGGGRDTVVATARSP----VLTLFMA---QAYSLGVSVVDDAPKEVLYVYLEGLKFAMTKTREHRTASLTVEGLQV 462
DL+ ++ AKTYV VR+RADGPTKVLEL E G +D + LS D+ A+ S LT MA + +G+S V++ P E++Y+Y+ G+ ++ + ++T++ LQ+
Sbjct: 3563 DLLPQVQNAKTYVHVRIRADGPTKVLELFEGGEEDFDEKE----------------------NKYELSSTASASSDSPTASETSTNAFDSLTSGMALHLRLDGIGISCVNELPMELVYIYMGGISLHYSRVNSNMRMNITLDDLQI 3686
BLAST of mRNA_P-wetherbeei_contig5284.1.1 vs. uniprot
Match: A0A5D6XG13_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XG13_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 1.400e-7 Identity = 44/145 (30.34%), Postives = 60/145 (41.38%), Query Frame = 1
Query: 70 AKTYVQVRVRADGPTKVLELLEQGGDDXXXXXXXXXPASVLSLPHFGAGGGTGGSMLSLSHRGGGGRDTVVATARSPVLTLFMAQAY--------------SLGVSVVDDAPKEVLYVYLEGLKFAMTKTREHRTASLTVEGLQV 462
AKTYV VRVRADGPTKVLEL E G +D +S S A + SP + A+ SLG+S V++ P E++YVY G+ T+ +LT++ +QV
Sbjct: 3633 AKTYVHVRVRADGPTKVLELFEGGEEDFDEKDSKHELSSAAS-----------------------------AASESPTASETSTNAFEALSNGVSINLRLDSLGISCVNELPMELVYVYFAGISLHYTRVNAKMRLNLTLDEVQV 3748 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5284.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5284.1.1 >prot_P-wetherbeei_contig5284.1.1 ID=prot_P-wetherbeei_contig5284.1.1|Name=mRNA_P-wetherbeei_contig5284.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=154bp AFGGEEDASRRSGGGDDLMSRLMAKTYVQVRVRADGPTKVLELLEQGGDDback to top mRNA from alignment at P-wetherbeei_contig5284:117..749- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5284.1.1 ID=mRNA_P-wetherbeei_contig5284.1.1|Name=mRNA_P-wetherbeei_contig5284.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=633bp|location=Sequence derived from alignment at P-wetherbeei_contig5284:117..749- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5284:117..749- >mRNA_P-wetherbeei_contig5284.1.1 ID=mRNA_P-wetherbeei_contig5284.1.1|Name=mRNA_P-wetherbeei_contig5284.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=462bp|location=Sequence derived from alignment at P-wetherbeei_contig5284:117..749- (Phaeothamnion wetherbeei SAG_119_79)back to top |