mRNA_P-wetherbeei_contig52727.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52727.1.1 vs. uniprot
Match: UPI0019BDAEC8 (Tyrosine-type recombinase/integrase n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=UPI0019BDAEC8) HSP 1 Score: 259 bits (662), Expect = 3.190e-85 Identity = 137/181 (75.69%), Postives = 157/181 (86.74%), Query Frame = 1
Query: 1 EQFLKYLQYEKRVSAHTTLAYKTDLAQFSKFLKDTYDDHPIESVTYGMVRSWIITLVDSKIEATSVNRKIASLKTFYKFLMRQQIIEKNPMQKIRVLKTQKRLPSFVNENEMVKVLDNKEDIKNIVVKWNDSLEDWRNRLILELFYATGIRLSELIGLKETQINLHDRTIKVLGKRNKERV 543
E FLKYLQ+EKRVSAHT+LAYK DL QF++FLK+T+DD IES YGMVRSWII+LVDS+I+ TSVNRKIASLKTFYKFLMRQQII K PMQKIR+LKTQKRLPSFVNE EM+ +LD+KE +ND+ EDWR+RLILELFYATGIRLSELI L+E +IN+ DRTIKVLGKRNKER+
Sbjct: 3 ELFLKYLQFEKRVSAHTSLAYKNDLDQFAQFLKETFDDALIESANYGMVRSWIISLVDSEIKPTSVNRKIASLKTFYKFLMRQQIIAKTPMQKIRILKTQKRLPSFVNEAEMITMLDSKE--------FNDTFEDWRDRLILELFYATGIRLSELINLQENRINIPDRTIKVLGKRNKERI 175
BLAST of mRNA_P-wetherbeei_contig52727.1.1 vs. uniprot
Match: A0A3D3I8R2_9BACT (Integrase (Fragment) n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3D3I8R2_9BACT) HSP 1 Score: 217 bits (552), Expect = 3.350e-69 Identity = 111/181 (61.33%), Postives = 143/181 (79.01%), Query Frame = 1
Query: 1 EQFLKYLQYEKRVSAHTTLAYKTDLAQFSKFLKDTYDDHPIESVTYGMVRSWIITLVDSKIEATSVNRKIASLKTFYKFLMRQQIIEKNPMQKIRVLKTQKRLPSFVNENEMVKVLDNKEDIKNIVVKWNDSLEDWRNRLILELFYATGIRLSELIGLKETQINLHDRTIKVLGKRNKERV 543
+ F KYLQYEKR S T L+Y+TDL Q+SKFL+ TY++ E TYG +RSWI++LV+ K++ S+NRKIA L++FYKF ++Q++I KNPMQKI+VLKT K+LP FV+E +M K+LD+ V++ + LE RNRLI+ELFY TGIRLSELIGLKE+ INLH+RTIKVLGKRNKERV
Sbjct: 3 DSFFKYLQYEKRYSPKTILSYQTDLHQYSKFLEQTYEEKKPELATYGAIRSWIVSLVEIKLDPRSINRKIACLRSFYKFCLKQEVITKNPMQKIKVLKTAKKLPHFVHEEDMTKLLDH--------VQFENDLEGCRNRLIIELFYGTGIRLSELIGLKESNINLHERTIKVLGKRNKERV 175
BLAST of mRNA_P-wetherbeei_contig52727.1.1 vs. uniprot
Match: A0A3D4INB8_9BACT (Tyrosine recombinase XerC n=2 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3D4INB8_9BACT) HSP 1 Score: 215 bits (548), Expect = 4.670e-67 Identity = 110/181 (60.77%), Postives = 143/181 (79.01%), Query Frame = 1
Query: 1 EQFLKYLQYEKRVSAHTTLAYKTDLAQFSKFLKDTYDDHPIESVTYGMVRSWIITLVDSKIEATSVNRKIASLKTFYKFLMRQQIIEKNPMQKIRVLKTQKRLPSFVNENEMVKVLDNKEDIKNIVVKWNDSLEDWRNRLILELFYATGIRLSELIGLKETQINLHDRTIKVLGKRNKERV 543
+ F KYLQYEKR S T L+Y+TDL Q+SKFL+ TY++ E TYG +RSWI++LV+ K++ S+NRKIA L++FYKF ++Q++I KNPMQKI+VL+T K+LP FV+E +M K+LD+ V++ + LE RNRLI+ELFY TGIRLSELIGLKE+ INLH+RTIKVLGKRNKERV
Sbjct: 3 DSFFKYLQYEKRYSPKTILSYQTDLHQYSKFLEQTYEEKKPELATYGAIRSWIVSLVEIKLDPRSINRKIACLRSFYKFCLKQEVITKNPMQKIKVLETAKKLPHFVHEEDMTKLLDH--------VQFENDLEGCRNRLIIELFYGTGIRLSELIGLKESNINLHERTIKVLGKRNKERV 175
BLAST of mRNA_P-wetherbeei_contig52727.1.1 vs. uniprot
Match: A0A7L9BD40_9BACT (Tyrosine recombinase XerC n=1 Tax=Flammeovirgaceae bacterium TaxID=2026740 RepID=A0A7L9BD40_9BACT) HSP 1 Score: 212 bits (540), Expect = 7.570e-66 Identity = 111/181 (61.33%), Postives = 141/181 (77.90%), Query Frame = 1
Query: 1 EQFLKYLQYEKRVSAHTTLAYKTDLAQFSKFLKDTYDDHPIESVTYGMVRSWIITLVDSKIEATSVNRKIASLKTFYKFLMRQQIIEKNPMQKIRVLKTQKRLPSFVNENEMVKVLDNKEDIKNIVVKWNDSLEDWRNRLILELFYATGIRLSELIGLKETQINLHDRTIKVLGKRNKERV 543
E FL YLQ+EKRVS HT AY+TDLAQF++F+ T+ + E YG++RSWII +V+ +ATSVNRKIASL+TFYKFL+R+Q+I KNPM KIRVLKT+KRLPSF+ E E+ +LD V++ DS WR++LILELFYATG+RLSELI LKE+Q++L + T+KVLGKRNKERV
Sbjct: 3 ESFLNYLQFEKRVSKHTLTAYQTDLAQFTEFINLTFPEFKPEHADYGVIRSWIIQVVEQGAKATSVNRKIASLRTFYKFLLREQVITKNPMLKIRVLKTEKRLPSFIQEKEIASLLD--------TVQFEDSHAGWRDKLILELFYATGMRLSELITLKESQVDLRNGTVKVLGKRNKERV 175
BLAST of mRNA_P-wetherbeei_contig52727.1.1 vs. uniprot
Match: A0A1M5XFL0_9BACT (Tyrosine recombinase XerC n=2 Tax=Chryseolinea TaxID=1433993 RepID=A0A1M5XFL0_9BACT) HSP 1 Score: 210 bits (534), Expect = 6.110e-65 Identity = 111/181 (61.33%), Postives = 143/181 (79.01%), Query Frame = 1
Query: 1 EQFLKYLQYEKRVSAHTTLAYKTDLAQFSKFLKDTYDDHPIESVTYGMVRSWIITLVDSKIEATSVNRKIASLKTFYKFLMRQQIIEKNPMQKIRVLKTQKRLPSFVNENEMVKVLDNKEDIKNIVVKWNDSLEDWRNRLILELFYATGIRLSELIGLKETQINLHDRTIKVLGKRNKERV 543
E FLKY+Q+EKR+SAHT LAYKTDL QF+ FL +T+ D+ E+ +G+VR+WII LV+S ++A SVNRKIA L++FYKFL+RQ++I K+P+QKI LKT+KRLPSFV E +M +LD+ E + L+ R++LILELFYATGIRLSEL+ LKE +I+LH RTIKVLGKRNKERV
Sbjct: 3 ESFLKYVQFEKRLSAHTVLAYKTDLDQFTVFLANTFPDYTPETADHGVVRTWIIQLVESNLDAASVNRKIACLRSFYKFLLRQEVISKDPLQKITQLKTKKRLPSFVKEGDMAHLLDDTE--------FGPGLDGVRDKLILELFYATGIRLSELLTLKENEIDLHGRTIKVLGKRNKERV 175
BLAST of mRNA_P-wetherbeei_contig52727.1.1 vs. uniprot
Match: A0A7Y4VJA8_9BACT (Tyrosine recombinase XerC n=1 Tax=Cyclobacteriaceae bacterium TaxID=2099675 RepID=A0A7Y4VJA8_9BACT) HSP 1 Score: 207 bits (526), Expect = 9.890e-64 Identity = 109/181 (60.22%), Postives = 139/181 (76.80%), Query Frame = 1
Query: 1 EQFLKYLQYEKRVSAHTTLAYKTDLAQFSKFLKDTYDDHPIESVTYGMVRSWIITLVDSKIEATSVNRKIASLKTFYKFLMRQQIIEKNPMQKIRVLKTQKRLPSFVNENEMVKVLDNKEDIKNIVVKWNDSLEDWRNRLILELFYATGIRLSELIGLKETQINLHDRTIKVLGKRNKERV 543
E FLKYLQ+EKR S T ++Y+TDL QF +FL + YD + YG+VRSWI+ LV++KI ATSVNRKIA L+++YKFLMRQ +IEK+PMQKI+VLK+ K+LP FVNE++ VK+LDN V + E R++LILELFY TG+RLSELI LKE +IN+ DRT++VLGKRNKERV
Sbjct: 3 ESFLKYLQFEKRYSPQTVISYETDLTQFERFLTEQYDGIKAQEANYGLVRSWIVQLVENKIGATSVNRKIACLRSYYKFLMRQGLIEKDPMQKIKVLKSPKKLPHFVNESDTVKLLDN--------VVFTPDHEGQRDQLILELFYGTGMRLSELINLKENRINISDRTLRVLGKRNKERV 175
BLAST of mRNA_P-wetherbeei_contig52727.1.1 vs. uniprot
Match: UPI00191F20FE (tyrosine-type recombinase/integrase n=1 Tax=Chryseolinea sp. Jin1 TaxID=2801331 RepID=UPI00191F20FE) HSP 1 Score: 205 bits (521), Expect = 5.630e-63 Identity = 116/181 (64.09%), Postives = 137/181 (75.69%), Query Frame = 1
Query: 1 EQFLKYLQYEKRVSAHTTLAYKTDLAQFSKFLKDTYDDHPIESVTYGMVRSWIITLVDSKIEATSVNRKIASLKTFYKFLMRQQIIEKNPMQKIRVLKTQKRLPSFVNENEMVKVLDNKEDIKNIVVKWNDSLEDWRNRLILELFYATGIRLSELIGLKETQINLHDRTIKVLGKRNKERV 543
E FLKYLQ+EKRVSAHT LAYKTDL QFS FL DT+ E+ T+G VRSWII LV+S IE SVNRK A L++FYKFL RQ++I K+PM KI LKT+K+LPSFV E +MV +LDN + + ++L R+RLILEL YATGIR SELIGLKET I+L +TIKVLGKRNKERV
Sbjct: 3 ESFLKYLQFEKRVSAHTVLAYKTDLGQFSLFLTDTFPGTFPETATHGEVRSWIIQLVESGIEPRSVNRKTACLRSFYKFLQRQELIGKDPMLKIMPLKTKKQLPSFVKEADMVHLLDN--------IVFENTLNGHRDRLILELLYATGIRRSELIGLKETHIDLRGQTIKVLGKRNKERV 175
BLAST of mRNA_P-wetherbeei_contig52727.1.1 vs. uniprot
Match: A0A6N4EQ74_9RHOO (Tyrosine recombinase XerC n=1 Tax=Azospira oryzae TaxID=146939 RepID=A0A6N4EQ74_9RHOO) HSP 1 Score: 200 bits (509), Expect = 3.770e-61 Identity = 100/181 (55.25%), Postives = 141/181 (77.90%), Query Frame = 1
Query: 1 EQFLKYLQYEKRVSAHTTLAYKTDLAQFSKFLKDTYDDHPIESVTYGMVRSWIITLVDSKIEATSVNRKIASLKTFYKFLMRQQIIEKNPMQKIRVLKTQKRLPSFVNENEMVKVLDNKEDIKNIVVKWNDSLEDWRNRLILELFYATGIRLSELIGLKETQINLHDRTIKVLGKRNKERV 543
E FL+YLQ+EKR S T ++YK DL QFS+F++ +Y D +E++ YG+VRSWI++LVD++++ SVNRKIA L++FYK+L+R+++I K+PM KI+VLKT+K+LP F+ EN++V +LD+ +D+ + R RLILEL Y TG+RLSELI LKE+ IN HD+T+KVLGKRNKERV
Sbjct: 3 EAFLRYLQFEKRYSLKTIVSYKNDLDQFSEFIRSSYPDFTVETIEYGIVRSWIVSLVDAELDPVSVNRKIACLRSFYKYLLREEVITKDPMTKIKVLKTKKKLPHFIQENDIVNLLDHNDDLSH-------DHHGLRARLILELLYGTGMRLSELITLKESAINFHDQTLKVLGKRNKERV 176
BLAST of mRNA_P-wetherbeei_contig52727.1.1 vs. uniprot
Match: A0A1T5LHJ0_9BACT (Tyrosine recombinase XerC n=1 Tax=Ohtaekwangia koreensis TaxID=688867 RepID=A0A1T5LHJ0_9BACT) HSP 1 Score: 200 bits (508), Expect = 5.180e-61 Identity = 106/181 (58.56%), Postives = 136/181 (75.14%), Query Frame = 1
Query: 1 EQFLKYLQYEKRVSAHTTLAYKTDLAQFSKFLKDTYDDHPIESVTYGMVRSWIITLVDSKIEATSVNRKIASLKTFYKFLMRQQIIEKNPMQKIRVLKTQKRLPSFVNENEMVKVLDNKEDIKNIVVKWNDSLEDWRNRLILELFYATGIRLSELIGLKETQINLHDRTIKVLGKRNKERV 543
+ FLKYLQYEKRVS++T LAY+TDL QF FL T+ D I++ Y ++RSWII LV+ I ++S+NRKIA L+TFYKFL R+++I K+PM KI++LK K+LPSFV E++MVKVLDN+ + + R +LILELFY TGIRLSEL+ LKE +NL +RTIKVLGKRNKERV
Sbjct: 3 DSFLKYLQYEKRVSSNTVLAYETDLKQFGTFLTITFPDTKIDAADYQVIRSWIIQLVEQNIGSSSINRKIACLRTFYKFLQREEVIAKDPMLKIKILKASKKLPSFVKESDMVKVLDNQ--------SFEHTFAGHREKLILELFYGTGIRLSELLTLKENDVNLGNRTIKVLGKRNKERV 175
BLAST of mRNA_P-wetherbeei_contig52727.1.1 vs. uniprot
Match: A0A401U7M4_9BACT (Tyrosine recombinase XerC n=1 Tax=Chryseotalea sanaruensis TaxID=2482724 RepID=A0A401U7M4_9BACT) HSP 1 Score: 197 bits (500), Expect = 8.120e-60 Identity = 105/179 (58.66%), Postives = 133/179 (74.30%), Query Frame = 1
Query: 7 FLKYLQYEKRVSAHTTLAYKTDLAQFSKFLKDTYDDHPIESVTYGMVRSWIITLVDSKIEATSVNRKIASLKTFYKFLMRQQIIEKNPMQKIRVLKTQKRLPSFVNENEMVKVLDNKEDIKNIVVKWNDSLEDWRNRLILELFYATGIRLSELIGLKETQINLHDRTIKVLGKRNKERV 543
FL+YL++EKR+S HT +AYK DL QF FLK+TY+ + S YGMVRSWI LVD K E SVNRKIA+L+ F+KFLMRQ + K+P+ KI VLKTQKRLPSFV E EM ++LD+ V + DSLE R+RL++ELFY +G+RL+EL+ L + IN +RT+KVLGKRNKERV
Sbjct: 5 FLRYLEFEKRLSKHTLIAYKGDLLQFKSFLKETYETEDLTSANYGMVRSWIAQLVDEKNEPRSVNRKIATLRAFFKFLMRQGSLSKDPLLKIMVLKTQKRLPSFVREEEMNQMLDH--------VVFEDSLEGHRDRLVMELFYGSGMRLAELLQLGDKSINFKNRTLKVLGKRNKERV 175 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52727.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52727.1.1 >prot_P-wetherbeei_contig52727.1.1 ID=prot_P-wetherbeei_contig52727.1.1|Name=mRNA_P-wetherbeei_contig52727.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=181bp EQFLKYLQYEKRVSAHTTLAYKTDLAQFSKFLKDTYDDHPIESVTYGMVRback to top mRNA from alignment at P-wetherbeei_contig52727:1..543+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52727.1.1 ID=mRNA_P-wetherbeei_contig52727.1.1|Name=mRNA_P-wetherbeei_contig52727.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=543bp|location=Sequence derived from alignment at P-wetherbeei_contig52727:1..543+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52727:1..543+ >mRNA_P-wetherbeei_contig52727.1.1 ID=mRNA_P-wetherbeei_contig52727.1.1|Name=mRNA_P-wetherbeei_contig52727.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=543bp|location=Sequence derived from alignment at P-wetherbeei_contig52727:1..543+ (Phaeothamnion wetherbeei SAG_119_79)back to top |