mRNA_P-wetherbeei_contig5258.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5258.1.1 vs. uniprot
Match: A0A7X9KKB8_9ACTN (TetR/AcrR family transcriptional regulator n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X9KKB8_9ACTN) HSP 1 Score: 212 bits (540), Expect = 5.500e-67 Identity = 112/188 (59.57%), Postives = 136/188 (72.34%), Query Frame = 1
Query: 1 LDSVGTTLLQAASDLLAAEGPSALTVRRIAADAGVSTMNVYSRFGGKDGVIEHLFVAGFTELGAGMDAADETNDPVADLRRCGIAYRTFALANATTYSIMFDRPVPDFVPSDAALEVAGATLGKLAARIQRVMDAGMFAAADPLQTAAVVWATCHGVVSLELRHVGPAPLVDWAVVYEQAMDAITRGL 564
LD VG+ LL+AA LLA EGPSALTVRRIAA+AG+STMNVYSRFGGKDGV+E LF+ GF L GM T+DP+ADLRRCG AYR FA ++T YS+MF+R V D+ P+ AA A TL LAAR+QR MDAG+ D AA+VW+TCHGV+SL+L+H G P VDW V+ A +A+ GL
Sbjct: 9 LDDVGSALLRAADGLLATEGPSALTVRRIAAEAGMSTMNVYSRFGGKDGVVEQLFLHGFELLAGGMGEVGATDDPIADLRRCGQAYRRFASEHSTLYSVMFERVVADYEPTPAAKAAALGTLELLAARLQRAMDAGLVRRMDATHAAAIVWSTCHGVISLQLKHDGITP-VDWQQVFADATEAVVSGL 195
BLAST of mRNA_P-wetherbeei_contig5258.1.1 vs. uniprot
Match: A0A7K1B1M7_9ACTN (TetR family transcriptional regulator n=2 Tax=root TaxID=1 RepID=A0A7K1B1M7_9ACTN) HSP 1 Score: 202 bits (513), Expect = 1.480e-62 Identity = 112/188 (59.57%), Postives = 136/188 (72.34%), Query Frame = 1
Query: 1 LDSVGTTLLQAASDLLAAEGPSALTVRRIAADAGVSTMNVYSRFGGKDGVIEHLFVAGFTELGAGMDAADETNDPVADLRRCGIAYRTFALANATTYSIMFDRPVPDFVPSDAALEVAGATLGKLAARIQRVMDAGMFAAADPLQTAAVVWATCHGVVSLELRHVGPAPLVDWAVVYEQAMDAITRGL 564
+D V TLL+AAS++LAAEGP+ALTVRRIA AGVSTMNVYSRFGGK+GV+EHL++ GFT L M ET+DP+ DL R G AYR FAL + T Y++MFD +P PS A+E A TL LA R+ R MDAG+ A ADP+ TAA VWA CHGVVSLE + VGP P +DWA VY++ A+ GL
Sbjct: 25 IDHVRVTLLRAASEVLAAEGPAALTVRRIARAAGVSTMNVYSRFGGKEGVVEHLYIEGFTRLRDAMTDDAETDDPLLDLVRSGQAYRRFALTHPTYYAVMFDGVIP-LQPSPTAVEHASGTLRLLADRLHRAMDAGLLAPADPMTTAAGVWAACHGVVSLERKAVGP-PGLDWAEVYDRTCAALLAGL 210
BLAST of mRNA_P-wetherbeei_contig5258.1.1 vs. uniprot
Match: A0A6N2DP89_9ACTN (TetR/AcrR family transcriptional regulator n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DP89_9ACTN) HSP 1 Score: 175 bits (444), Expect = 1.710e-52 Identity = 93/181 (51.38%), Postives = 117/181 (64.64%), Query Frame = 1
Query: 22 LLQAASDLLAAEGPSALTVRRIAADAGVSTMNVYSRFGGKDGVIEHLFVAGFTELGAGMDAADETNDPVADLRRCGIAYRTFALANATTYSIMFDRPVPDFVPSDAALEVAGATLGKLAARIQRVMDAGMFAAADPLQTAAVVWATCHGVVSLELRHVGPAPLVDWAVVYEQAMDAITRGL 564
++ AA +L EGP+ LT+R+IA AG STM VYSRFGGKDG+++ LF GFT L ++A T+DP+ADL + G AYR FAL + YS+MFDRPVP P DA + +A L LA + R M+ G A ADPL TA VW TCHG+VSLE+ P P +DWA YE A+ RGL
Sbjct: 10 IVGAARRILTVEGPAGLTIRKIATAAGHSTMAVYSRFGGKDGLVDELFTEGFTRLTEALEAVIPTDDPLADLDQQGAAYRRFALDHPQHYSLMFDRPVPGDEPGDATVPIANGALDVLARGLARAMEHGALAEADPLATAVAVWGTCHGLVSLEMAGSAP-PGIDWAATYEHTCHALLRGL 189
BLAST of mRNA_P-wetherbeei_contig5258.1.1 vs. uniprot
Match: UPI000E343A63 (TetR/AcrR family transcriptional regulator n=1 Tax=Desertimonas flava TaxID=2064846 RepID=UPI000E343A63) HSP 1 Score: 174 bits (442), Expect = 9.970e-52 Identity = 102/189 (53.97%), Postives = 123/189 (65.08%), Query Frame = 1
Query: 4 DSVGTTLLQAASDLLAAEGPSALTVRRIAADAGVSTMNVYSRFGGKDGVIEHLFVAGFTELGAGMDAADETNDPVADLRRCGIAYRTFALANATTYSIMFDRPVPDFVPSDAALEVAGATLGKLAARIQRVMDAGMFAAADPLQTAAVVWATCHGVVSLELR--HVGPAPLVDWAVVYEQAMDAITRGL 564
D LLQAA DLLAAEGPSAL+VRRIAA AGVSTMNVYSRFGGK GV++ L++ GF LG M T+DP+ +LRRCG AYR FA AN T YS+MFD+ V DF PS+ A VA +L ++ R+Q MD G A D Q A +WA HG+VSLE+R H G DW + + A+ RGL
Sbjct: 38 DETRAALLQAAHDLLAAEGPSALSVRRIAAAAGVSTMNVYSRFGGKVGVLDELWIDGFRRLGEAMQDFPLTDDPLENLRRCGQAYRAFARANPTYYSLMFDQAVRDFEPSEHAKAVAFDSLSRVVERVQAAMDEGAIPAGDAYQVAVGLWACEHGLVSLEMRMEHDGE---FDWDHIAPATVAALVRGL 223
BLAST of mRNA_P-wetherbeei_contig5258.1.1 vs. uniprot
Match: A0A538CXU8_9ACTN (TetR/AcrR family transcriptional regulator n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538CXU8_9ACTN) HSP 1 Score: 166 bits (420), Expect = 1.060e-48 Identity = 94/189 (49.74%), Postives = 120/189 (63.49%), Query Frame = 1
Query: 1 LDSVGTTLLQAASDLLAAEGPSALTVRRIAADAGVSTMNVYSRFGGKDGVIEHLFVAGFTELGAGMDAADETNDPVADLRRCGIAYRTFALANATTYSIMFDRPVPDFVPSDAALEVAGATLGKLAARIQRVMDAGMFAAADPLQTAAVVWATCHGVVSLELRHVGPAPLVDWAVVYEQAMDAITRGLR 567
LD G LL+AAS LLA +G ALTVRRIAADAG STM VYSRFG KDGV++HLF+ GF L A MD+ ++ +P+ D+ +CG+AYR AL NAT Y +MF R VP FVPSD A V+ ++ +L R++R DAG + P A V+W HG V LEL + A D A Y+ + I +G R
Sbjct: 5 LDEQGQALLEAASRLLADDGADALTVRRIAADAGCSTMGVYSRFGNKDGVVDHLFIEGFRRLIAAMDSVGDSGNPLEDMHQCGLAYRRNALENATYYLVMFARAVPGFVPSDEARTVSYSSFERLVERVRRCQDAGQYVDGSPEAMAEVIWGAIHGHVMLELVGM-QATDDDPAARYDHMLALIEQGFR 192
BLAST of mRNA_P-wetherbeei_contig5258.1.1 vs. uniprot
Match: A0A7V9II20_9ACTN (TetR/AcrR family transcriptional regulator n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9II20_9ACTN) HSP 1 Score: 163 bits (413), Expect = 1.540e-47 Identity = 90/187 (48.13%), Postives = 119/187 (63.64%), Query Frame = 1
Query: 4 DSVGTTLLQAASDLLAAEGPSALTVRRIAADAGVSTMNVYSRFGGKDGVIEHLFVAGFTELGAGMDAADETNDPVADLRRCGIAYRTFALANATTYSIMFDRPVPDFVPSDAALEVAGATLGKLAARIQRVMDAGMFAAADPLQTAAVVWATCHGVVSLELRHVGPAPLVDWAVVYEQAMDAITRGL 564
D+ +LL+AA LL +GPSALTVR IA +A +STMNVYSR+G K+G+++ L+ GF L M+ T+DP+ DLR G YR FAL N+T YS+MFDRPV F PS +L +A L LA R++R MDAG A D + A+ +WAT HGVV +E R P+ DW +Y + A+ RGL
Sbjct: 23 DATRDSLLRAADRLLVEQGPSALTVRAIANEAQMSTMNVYSRYGSKEGIVDELYRRGFASLNNAMNDVPRTDDPLDDLREIGAIYREFALENSTYYSLMFDRPVRYFEPSGESLSMAVDALHLLAQRVRRCMDAGQLAEGDETEVASSLWATVHGVVCIE-RFKDFTPIPDWERLYSTTVSAVIRGL 208
BLAST of mRNA_P-wetherbeei_contig5258.1.1 vs. uniprot
Match: A0A7W0KUX2_9ACTN (TetR/AcrR family transcriptional regulator n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0KUX2_9ACTN) HSP 1 Score: 163 bits (412), Expect = 4.520e-47 Identity = 96/194 (49.48%), Postives = 118/194 (60.82%), Query Frame = 1
Query: 4 DSVGTTLLQAASDLLAAEGPSALTVRRIAADAGVSTMNVYSRFGGKDGVIEHLFVAGFTELGAGMDAADETNDPVADLRRCGIAYRTFALANATTYSIMFDRPVPDFVPSDAALEVAGATLGKLAARIQRVMDAGMFAAADPLQTAAVVWATCHGVVSLELRHVG------PAPLVDWAVVYEQAMDAITRGLR 567
D LL AA LL+A GP ALTVR IA AG+STMNVYSRFGGKDGV++ LF GF +L M A T DP+ADLRRCG YR FA ATTYS+MF+RPVP++ PS AA VA L LA R++R M G DP A+ +W+ HG+ SLE P+P +W + + A+D + GLR
Sbjct: 45 DPTRAALLDAAHALLSAGGPEALTVRAIATRAGMSTMNVYSRFGGKDGVLDELFSHGFRQLAEQMRRAPTTADPLADLRRCGHEYRRFARERATTYSLMFERPVPEYRPSLAARTVAMDALVLLAERVERAMAEGALRRGDPFVAASALWSLVHGLASLEAATAHDHDDGEPSPF-EWDDIADVAVDGLLAGLR 237
BLAST of mRNA_P-wetherbeei_contig5258.1.1 vs. uniprot
Match: A0A7W1LT55_9ACTN (TetR/AcrR family transcriptional regulator n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1LT55_9ACTN) HSP 1 Score: 158 bits (399), Expect = 2.180e-45 Identity = 87/187 (46.52%), Postives = 117/187 (62.57%), Query Frame = 1
Query: 4 DSVGTTLLQAASDLLAAEGPSALTVRRIAADAGVSTMNVYSRFGGKDGVIEHLFVAGFTELGAGMDAADETNDPVADLRRCGIAYRTFALANATTYSIMFDRPVPDFVPSDAALEVAGATLGKLAARIQRVMDAGMFAAADPLQTAAVVWATCHGVVSLELRHVGPAPLVDWAVVYEQAMDAITRGL 564
D+ +LL+AA LL +GP ALTVR IA +A +STMNVYSR+G K+G+++ L+ GF L + M+ ET+DP+ DLR+ G YR FA N YS+MFDRPV F PS ALE+A +LG L R+QR MD G D + A+ +WA HGVV +E R + DW +Y ++A+ RGL
Sbjct: 24 DATRDSLLRAADRLLVEQGPGALTVRAIANEAQMSTMNVYSRYGSKEGIVDELYRRGFASLKSAMNDVPETDDPLEDLRQIGNVYREFAQTNEAYYSLMFDRPVRYFEPSKEALEIAVDSLGLLVERVQRCMDKGQLVNRDATEVASALWAAVHGVVCIE-RFKDLLAIPDWDSLYGTTVNALIRGL 209
BLAST of mRNA_P-wetherbeei_contig5258.1.1 vs. uniprot
Match: A0A4R7I357_9ACTN (TetR family transcriptional regulator n=1 Tax=Ilumatobacter fluminis TaxID=467091 RepID=A0A4R7I357_9ACTN) HSP 1 Score: 151 bits (381), Expect = 7.310e-43 Identity = 92/191 (48.17%), Postives = 113/191 (59.16%), Query Frame = 1
Query: 4 DSVGTTLLQAASDLLAAEGPSALTVRRIAADAGVSTMNVYSRFGGKDGVIEHLFVAGFTELGAGMDAADETNDPVADLRRCGIAYRTFALANATTYSIMFDRPVPDFVPSDAALEVAGATLGKLAARIQRVMDAGMF---AAADPLQTAAVVWATCHGVVSLELRHVGPAPLVDWAVVYEQAMDAITRGLR 567
D LL AA LLA EGP ALTVRRIA +AG+STMNVYSRFGGKDGVI+ L+V G+ +L ++ +ET+D + DLRR IAYR+FA + Y IMF P D AL A LG AR++R + G A D A +W TCHG+VSLEL + +VDWA +Y A D GLR
Sbjct: 6 DETSEALLAAAHRLLAGEGPDALTVRRIATEAGMSTMNVYSRFGGKDGVIDELYVYGYNKLFDAIEQVEETDDALDDLRRVAIAYRSFATEHPMYYEIMFRGANPSAQSVDRAL----AGLGNFVARLERAAERGAVRFPADLDSTAATAWLWGTCHGLVSLELDGIADE-VVDWAKIYASATDVAITGLR 191
BLAST of mRNA_P-wetherbeei_contig5258.1.1 vs. uniprot
Match: A0A5M7BW39_SACHI (TetR/AcrR family transcriptional regulator n=1 Tax=Saccharopolyspora hirsuta TaxID=1837 RepID=A0A5M7BW39_SACHI) HSP 1 Score: 143 bits (360), Expect = 9.840e-40 Identity = 80/180 (44.44%), Postives = 107/180 (59.44%), Query Frame = 1
Query: 4 DSVGTTLLQAASDLLAAEGPSALTVRRIAADAGVSTMNVYSRFGGKDGVIEHLFVAGFTELGAGMDAADETNDPVADLRRCGIAYRTFALANATTYSIMFDRPVPDFVPSDAALEVAGATLGKLAARIQRVMDAGMFAAADPLQTAAVVWATCHGVVSLELRHVGPAPLVDWAVVYEQAM 543
D++ T LL A ++L+A+GP L +RR+AAD G ST VYS FGGK G++ L+V GF G M+ T+DPVADL G+AYR ALAN YSIMF R VPDF P D A++ A +L L + R + G+ DP + WA HG++SLEL+H P + YE+A+
Sbjct: 9 DALRTRLLDRAGEVLSAQGPEGLGLRRLAADVGTSTTAVYSLFGGKPGLVRELYVEGFRRFGDRMEQVPRTDDPVADLCALGLAYRESALANPHFYSIMFGRAVPDFAPDDEAVDAALRSLRPLQETVARGIAQGVLVDTDPDEITFAAWALVHGLISLELQHGSMLPGSATSARYERAL 188 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5258.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5258.1.1 >prot_P-wetherbeei_contig5258.1.1 ID=prot_P-wetherbeei_contig5258.1.1|Name=mRNA_P-wetherbeei_contig5258.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=191bp LDSVGTTLLQAASDLLAAEGPSALTVRRIAADAGVSTMNVYSRFGGKDGVback to top mRNA from alignment at P-wetherbeei_contig5258:14..586+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5258.1.1 ID=mRNA_P-wetherbeei_contig5258.1.1|Name=mRNA_P-wetherbeei_contig5258.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=573bp|location=Sequence derived from alignment at P-wetherbeei_contig5258:14..586+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5258:14..586+ >mRNA_P-wetherbeei_contig5258.1.1 ID=mRNA_P-wetherbeei_contig5258.1.1|Name=mRNA_P-wetherbeei_contig5258.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=573bp|location=Sequence derived from alignment at P-wetherbeei_contig5258:14..586+ (Phaeothamnion wetherbeei SAG_119_79)back to top |