mRNA_P-wetherbeei_contig52548.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52548.1.1 vs. uniprot
Match: A0A6L5FIA5_9HYPH (NAD(P)-binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FIA5_9HYPH) HSP 1 Score: 220 bits (561), Expect = 1.460e-67 Identity = 115/180 (63.89%), Postives = 132/180 (73.33%), Query Frame = 1
Query: 1 LGAACIEPALAYLNRAGAAVQFGHRLRALEFADGRATALQFGDDMVALGRDDRVVVAAPPVVATALLPGLSAPTEFRAIVNAHFKIDPPAGSEPILGVVNATVEWIFAFADRLSVTISAADRLVDAPREELARTIWREVAIAYKMGNIGMPPWQIVRERRATFAAHPTQEANRPGPETTW 540
LGAA I+PAL L R + FGHRLRA+ R +L FG+D V LG D V+A PP VA AL+P LSAPTEFRAIVNAHF++ PPA P++GVVN TVEWIF+F DR+SVTIS ADRL+DAPREELA IWREV+ K+ MPPWQIVRERRATFAA P Q+A RPGP T W
Sbjct: 201 LGAALIDPALRVLERQHGTICFGHRLRAVGIEGDRIESLDFGEDSVPLGPQDAAVLAVPPPVAAALVPELSAPTEFRAIVNAHFRLAPPADLPPLIGVVNGTVEWIFSFPDRISVTISGADRLLDAPREELAGLIWREVSQVAKLAE-PMPPWQIVRERRATFAATPEQDARRPGPRTPW 379
BLAST of mRNA_P-wetherbeei_contig52548.1.1 vs. uniprot
Match: A0A1Q7BKA5_9PROT (Amino_oxidase domain-containing protein n=2 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A1Q7BKA5_9PROT) HSP 1 Score: 210 bits (535), Expect = 1.310e-63 Identity = 107/180 (59.44%), Postives = 130/180 (72.22%), Query Frame = 1
Query: 1 LGAACIEPALAYLNRAGAAVQFGHRLRALEFADGRATALQFGDDMVALGRDDRVVVAAPPVVATALLPGLSAPTEFRAIVNAHFKIDPPAGSEPILGVVNATVEWIFAFADRLSVTISAADRLVDAPREELARTIWREVAIAYKMGNIGMPPWQIVRERRATFAAHPTQEANRPGPETTW 540
LG IEPAL +L V FGHRLRAL+F + +L FGD+ +A G D V++A PP+VA L+P L AP+EFRAIVNAHF++DPP G PI+GVVN T+EW+F FADRLS+TISAADRL+DAPRE LA+ +W+EVA + +PPWQIVRERRATFAA P Q A RP T W
Sbjct: 201 LGQVFIEPALRFLGEHNVKVAFGHRLRALDFDGDKVVSLDFGDERLAAGAD-AVILAVPPIVAADLVPDLKAPSEFRAIVNAHFRLDPPPGLAPIIGVVNGTIEWLFTFADRLSITISAADRLLDAPREMLAQKLWQEVATVTGLPT-ALPPWQIVRERRATFAATPRQNAKRPAATTAW 378
BLAST of mRNA_P-wetherbeei_contig52548.1.1 vs. uniprot
Match: A0A1Q7BKE4_9PROT (Amino_oxidase domain-containing protein n=1 Tax=Alphaproteobacteria bacterium 13_2_20CM_2_64_7 TaxID=1803507 RepID=A0A1Q7BKE4_9PROT) HSP 1 Score: 209 bits (531), Expect = 4.590e-63 Identity = 106/180 (58.89%), Postives = 131/180 (72.78%), Query Frame = 1
Query: 1 LGAACIEPALAYLNRAGAAVQFGHRLRALEFADGRATALQFGDDMVALGRDDRVVVAAPPVVATALLPGLSAPTEFRAIVNAHFKIDPPAGSEPILGVVNATVEWIFAFADRLSVTISAADRLVDAPREELARTIWREVAIAYKMGNIGMPPWQIVRERRATFAAHPTQEANRPGPETTW 540
LG +EPAL +L + A V FGHRLRAL FA + L FGDD VA+G DD V++A PP+VA L+P L P++FRAIVNAHF+++PPAG PI+GVVN T+EW+F F DRLSVTISAADRL+D PRE LA+ +W+EVA + +P WQIVRERRATFAA P + A RP +T W
Sbjct: 201 LGQVFVEPALRFLGKHKAKVVFGHRLRALGFAHDKVVTLDFGDDKVAIGDDD-VILAVPPIVAAGLVPELKTPSQFRAIVNAHFRLEPPAGLAPIIGVVNGTMEWLFTFPDRLSVTISAADRLLDVPRETLAQNLWQEVAAVAGLST-ALPRWQIVRERRATFAATPGENAKRPDAKTAW 378
BLAST of mRNA_P-wetherbeei_contig52548.1.1 vs. uniprot
Match: UPI00131EBA79 (hydroxysqualene dehydroxylase HpnE n=1 Tax=Bradyrhizobium sp. S69 TaxID=1641856 RepID=UPI00131EBA79) HSP 1 Score: 207 bits (528), Expect = 1.430e-62 Identity = 108/182 (59.34%), Postives = 127/182 (69.78%), Query Frame = 1
Query: 1 LGAACIEPALAYLNRAGAAVQFGHRLRALEFADGRATALQFGDDMVALGRDDRVVVAAPPVVATALLPGLSAPTEFRAIVNAHFKIDPPAGSEPILGVVNATVEWIFAFADRLSVTISAADRLVDAPREELARTIWREVAIAYKMGNIG--MPPWQIVRERRATFAAHPTQEANRPGPETTW 540
L A +EPA+ L GA++QFGH LRA + R + L FGDD++ALG DD VV+A PP A ALLPGL P++FRAIVNAHF+ DPP PILGVV VEW+FAF RLS+TIS ADRLVD PREELA+ IWR++ K G + +PPWQIVRERRATF A P Q A RPG T W
Sbjct: 201 LSAVLVEPAIRLLQAKGASIQFGHELRAFGKSAERISELNFGDDVIALGADDMVVMAVPPRPAAALLPGLKTPSKFRAIVNAHFRFDPPKDLPPILGVVGGLVEWLFAFPQRLSITISGADRLVDMPREELAQAIWRDIC---KAGGVQGELPPWQIVRERRATFEATPEQNALRPGASTAW 379
BLAST of mRNA_P-wetherbeei_contig52548.1.1 vs. uniprot
Match: A0A1H1TNS5_9BRAD (Squalene-associated FAD-dependent desaturase n=1 Tax=Bradyrhizobium canariense TaxID=255045 RepID=A0A1H1TNS5_9BRAD) HSP 1 Score: 206 bits (524), Expect = 5.670e-62 Identity = 105/180 (58.33%), Postives = 126/180 (70.00%), Query Frame = 1
Query: 1 LGAACIEPALAYLNRAGAAVQFGHRLRALEFADGRATALQFGDDMVALGRDDRVVVAAPPVVATALLPGLSAPTEFRAIVNAHFKIDPPAGSEPILGVVNATVEWIFAFADRLSVTISAADRLVDAPREELARTIWREVAIAYKMGNIGMPPWQIVRERRATFAAHPTQEANRPGPETTW 540
L A +EPA+ L GA+++FGH LRA A+GR L FGDD++ L D VV+A PP A +LLPGL P++FRAIVNAHF+ DPP + PILGVV VEW+FAF RLSVTIS ADRLVD PREELA+ IW ++ A ++ +PPWQIVRERRATF A P Q A RPGP T W
Sbjct: 201 LSAVLVEPAIKLLQDKGASIRFGHELRAFSMAEGRVGELNFGDDVIGLAPGDAVVMAVPPRPAASLLPGLKTPSKFRAIVNAHFRFDPPKDAPPILGVVGGLVEWLFAFPQRLSVTISNADRLVDMPREELAQAIWSDICKAARVQG-ELPPWQIVRERRATFEATPEQNALRPGPVTNW 379
BLAST of mRNA_P-wetherbeei_contig52548.1.1 vs. uniprot
Match: A0A2J7TL14_METSI (Amino_oxidase domain-containing protein n=2 Tax=Methylocella silvestris TaxID=199596 RepID=A0A2J7TL14_METSI) HSP 1 Score: 206 bits (524), Expect = 5.960e-62 Identity = 108/178 (60.67%), Postives = 127/178 (71.35%), Query Frame = 1
Query: 1 LGAACIEPALAYLNRAGAAVQFGHRLRALEFADGRATALQFGDDMVALGRDDRVVVAAPPVVATALLPGLSAPTEFRAIVNAHFKIDPPAGSEPILGVVNATVEWIFAFADRLSVTISAADRLVDAPREELARTIWREVAIAYKMGNIGMPPWQIVRERRATFAAHPTQEANRPGPET 534
L +A IEPAL YL + GA V+ HRLR + F RA+AL FGD LG DD +++AAP VA LLPGL AP EFRAIVNAHFKIDPP PILGVVN T+EW+FAF DR+S+TIS ADRL+D REELA TIW E A A + +PPWQI++E+RATFAA P + A RPG T
Sbjct: 201 LSSAFIEPALLYLVKRGADVRLDHRLRKIGFDGARASALDFGDARTELGPDDELILAAPAPVAQDLLPGLEAPVEFRAIVNAHFKIDPPQNLPPILGVVNGTIEWVFAFKDRISITISGADRLLDIGREELAATIWAETACACGLDQ-PLPPWQIIKEKRATFAATPVENARRPGAAT 377
BLAST of mRNA_P-wetherbeei_contig52548.1.1 vs. uniprot
Match: A0A2D2D0E3_METTR (Amino_oxidase domain-containing protein n=3 Tax=Methylosinus TaxID=425 RepID=A0A2D2D0E3_METTR) HSP 1 Score: 206 bits (523), Expect = 7.810e-62 Identity = 110/180 (61.11%), Postives = 127/180 (70.56%), Query Frame = 1
Query: 1 LGAACIEPALAYLNRAGAAVQFGHRLRALEFADGRATALQFGDDMVALGRDDRVVVAAPPVVATALLPGLSAPTEFRAIVNAHFKIDPPAGSEPILGVVNATVEWIFAFADRLSVTISAADRLVDAPREELARTIWREVAIAYKMGNIGMPPWQIVRERRATFAAHPTQEANRPGPETTW 540
LGAA IEPALA L AG A +F RLRA+EFA RA AL FG++ VALGR+D V +A PP A LLPGL AP EFR IVNAHFKI PP G +LG++ + EW+FAF DRLSVTIS ADRL+D PRE LA IW EVA + +PPWQIV+E+RATFAA PTQ+ RP T W
Sbjct: 201 LGAAFIEPALATLAAAGVAPRFAARLRAVEFAGERAAALDFGEERVALGREDAVALAVPPWTAQELLPGLVAPDEFRGIVNAHFKIAPPPGQPALLGMIGSLTEWLFAFEDRLSVTISGADRLMDEPRESLAARIWAEVAAVTGLPG-ELPPWQIVKEKRATFAATPTQQRRRPDAATRW 379
BLAST of mRNA_P-wetherbeei_contig52548.1.1 vs. uniprot
Match: A0A1M5MD56_9BRAD (Squalene-associated FAD-dependent desaturase n=3 Tax=Bradyrhizobium TaxID=374 RepID=A0A1M5MD56_9BRAD) HSP 1 Score: 206 bits (523), Expect = 8.010e-62 Identity = 104/180 (57.78%), Postives = 125/180 (69.44%), Query Frame = 1
Query: 1 LGAACIEPALAYLNRAGAAVQFGHRLRALEFADGRATALQFGDDMVALGRDDRVVVAAPPVVATALLPGLSAPTEFRAIVNAHFKIDPPAGSEPILGVVNATVEWIFAFADRLSVTISAADRLVDAPREELARTIWREVAIAYKMGNIGMPPWQIVRERRATFAAHPTQEANRPGPETTW 540
L A +EPA+ L GA++QFGH LR + R L+FGDD VA+G DD VV+A PP A ALLPGL P++FRAIVNAHF+ DPP P+LGVV +EW+FAF RLS+TIS DRLVD PREELA+ IWR++ A + +PPWQIVRERRATF A P Q A RPGP T+W
Sbjct: 201 LSAVLVEPAIRLLQGKGASIQFGHELRGFGMSAARVGELKFGDDTVAIGPDDAVVMAVPPRPAAALLPGLKTPSKFRAIVNAHFRFDPPKDMPPLLGVVGGLIEWLFAFPQRLSITISNGDRLVDMPREELAQAIWRDICKASGVQG-DLPPWQIVRERRATFEATPEQNALRPGPSTSW 379
BLAST of mRNA_P-wetherbeei_contig52548.1.1 vs. uniprot
Match: UPI000B4B265F (hydroxysqualene dehydroxylase HpnE n=1 Tax=Rhodomicrobium TaxID=1068 RepID=UPI000B4B265F) HSP 1 Score: 206 bits (523), Expect = 1.310e-61 Identity = 102/180 (56.67%), Postives = 128/180 (71.11%), Query Frame = 1
Query: 1 LGAACIEPALAYLNRAGAAVQFGHRLRALEFADGRATALQFGDDMVALGRDDRVVVAAPPVVATALLPGLSAPTEFRAIVNAHFKIDPPAGSEPILGVVNATVEWIFAFADRLSVTISAADRLVDAPREELARTIWREVAIAYKMGNIGMPPWQIVRERRATFAAHPTQEANRPGPETTW 540
L +A +EPAL YL G VQ+GHRLRAL + R L FG+D V L D VV+A P +VA L+PGL AP++FR+IVN HF+I PP G P+ G+VN TVEWIFAF DRLS+TIS ADRL+D PRE LAR +W+EV++ + +PPWQI+RERRATFAA P ++A RP +T W
Sbjct: 202 LSSAFVEPALRYLEAQGVRVQYGHRLRALGLDERRVAKLDFGEDSVPLAPGDGVVLAVPALVALTLVPGLQAPSQFRSIVNGHFRIAPPPGLAPMTGIVNGTVEWIFAFRDRLSITISGADRLLDTPRETLARNLWKEVSVITGLAE-DLPPWQIIRERRATFAALPGEDAKRPATDTAW 380
BLAST of mRNA_P-wetherbeei_contig52548.1.1 vs. uniprot
Match: UPI001BD500C3 (hydroxysqualene dehydroxylase HpnE n=1 Tax=Bradyrhizobium sp. dw_78 TaxID=2719793 RepID=UPI001BD500C3) HSP 1 Score: 204 bits (520), Expect = 2.250e-61 Identity = 105/180 (58.33%), Postives = 126/180 (70.00%), Query Frame = 1
Query: 1 LGAACIEPALAYLNRAGAAVQFGHRLRALEFADGRATALQFGDDMVALGRDDRVVVAAPPVVATALLPGLSAPTEFRAIVNAHFKIDPPAGSEPILGVVNATVEWIFAFADRLSVTISAADRLVDAPREELARTIWREVAIAYKMGNIGMPPWQIVRERRATFAAHPTQEANRPGPETTW 540
L A IEPA+ L GA+++F LRA +DGR + L+FG D +ALG DD VV+A PP A +LLPGL P++FRAIVNAHF+ DPP + PI+GVV VEW+FAF RLSVTIS DRLVD PREELA+ IW ++ A +G +PPWQIVRERRATF A P Q A RPGP T W
Sbjct: 201 LSAVLIEPAVKLLQEGGASIRFSQELRAFGMSDGRISELKFGADAIALGPDDAVVMAVPPRAAASLLPGLKTPSKFRAIVNAHFRFDPPKDAPPIVGVVGGLVEWLFAFPQRLSVTISNGDRLVDMPREELAQAIWSDICKAAGVGG-ELPPWQIVRERRATFEATPEQNALRPGPVTQW 379 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52548.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52548.1.1 >prot_P-wetherbeei_contig52548.1.1 ID=prot_P-wetherbeei_contig52548.1.1|Name=mRNA_P-wetherbeei_contig52548.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=180bp LGAACIEPALAYLNRAGAAVQFGHRLRALEFADGRATALQFGDDMVALGRback to top mRNA from alignment at P-wetherbeei_contig52548:3..542+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52548.1.1 ID=mRNA_P-wetherbeei_contig52548.1.1|Name=mRNA_P-wetherbeei_contig52548.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=540bp|location=Sequence derived from alignment at P-wetherbeei_contig52548:3..542+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52548:3..542+ >mRNA_P-wetherbeei_contig52548.1.1 ID=mRNA_P-wetherbeei_contig52548.1.1|Name=mRNA_P-wetherbeei_contig52548.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=540bp|location=Sequence derived from alignment at P-wetherbeei_contig52548:3..542+ (Phaeothamnion wetherbeei SAG_119_79)back to top |