mRNA_P-wetherbeei_contig52235.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52235.1.1 vs. uniprot
Match: UPI0019A5498A (Uncharacterized protein n=1 Tax=Methyloceanibacter sp. TaxID=1965321 RepID=UPI0019A5498A) HSP 1 Score: 79.7 bits (195), Expect = 3.250e-18 Identity = 47/69 (68.12%), Postives = 51/69 (73.91%), Query Frame = 1
Query: 1 KALAAVSRWPASRQDDAAELLLALDRLGGPTYVASEEELATIDEALAEVERGEFATDVEVEAAFARFRR 207
KAL AV WP RQD+AA LLLALD+LG Y AS EEL IDEAL +V RGE AT VEVE AFARFR+
Sbjct: 3 KALEAVRSWPKHRQDEAAALLLALDQLGPTPYRASAEELRAIDEALEQVARGEQATAVEVENAFARFRK 71
BLAST of mRNA_P-wetherbeei_contig52235.1.1 vs. uniprot
Match: A0A357CFV5_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A357CFV5_9HYPH) HSP 1 Score: 74.3 bits (181), Expect = 4.420e-16 Identity = 43/69 (62.32%), Postives = 51/69 (73.91%), Query Frame = 1
Query: 1 KALAAVSRWPASRQDDAAELLLALDRLGGPTYVASEEELATIDEALAEVERGEFATDVEVEAAFARFRR 207
KAL AV WP RQ++AAELLLALDRLG Y AS +EL+ IDEAL +V R + A+ EVE AFARFR+
Sbjct: 3 KALNAVRGWPQDRQNEAAELLLALDRLGPAPYRASADELSAIDEALKQVARDKQASPAEVEEAFARFRK 71
BLAST of mRNA_P-wetherbeei_contig52235.1.1 vs. uniprot
Match: A0A4Q5PIN5_9BRAD (Uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A4Q5PIN5_9BRAD) HSP 1 Score: 57.4 bits (137), Expect = 2.540e-9 Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 1
Query: 25 WPASRQDDAAELLLALDR-LGGPTYVASEEELATIDEALAEVERGEFATDVEVEAAFARFRR 207
WP + Q + + +++ LG TY AS++EL TIDEA+A ++ GEFAT EVEA FA+FRR
Sbjct: 16 WPETAQAELVAVAKEIEQELGAHTYEASDDELQTIDEAVASLDAGEFATKAEVEAVFAKFRR 77
BLAST of mRNA_P-wetherbeei_contig52235.1.1 vs. uniprot
Match: A0A345ZVP4_9HYPH (Uncharacterized protein n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A345ZVP4_9HYPH) HSP 1 Score: 55.8 bits (133), Expect = 1.000e-8 Identity = 32/69 (46.38%), Postives = 42/69 (60.87%), Query Frame = 1
Query: 1 KALAAVSRWPASRQDDAAELLLALDRLGGPTYVASEEELATIDEALAEVERGEFATDVEVEAAFARFRR 207
K L W Q++ A++ L ++ Y A+ EEL IDEALAEV RGE A+D EVEA FA++RR
Sbjct: 7 KVLTRAQAWSEQDQEELAQVALEIEARRHGLYHATPEELRAIDEALAEVARGEIASDEEVEAVFAKYRR 75
BLAST of mRNA_P-wetherbeei_contig52235.1.1 vs. uniprot
Match: UPI001BA97FC3 (hypothetical protein n=2 Tax=Rhodopseudomonas sp. SK50-23 TaxID=340268 RepID=UPI001BA97FC3) HSP 1 Score: 55.8 bits (133), Expect = 1.030e-8 Identity = 34/65 (52.31%), Postives = 43/65 (66.15%), Query Frame = 1
Query: 25 WPASRQDDAAELLLAL----DRLGGPTYVASEEELATIDEALAEVERGEFATDVEVEAAFARFRR 207
WP + Q AEL+ A L TY A++EEL IDEA+A ++RGEFAT+ E+E AFARFRR
Sbjct: 16 WPETAQ---AELMAAAKEIEQELSENTYDATDEELRIIDEAVASLDRGEFATEAEIEEAFARFRR 77
BLAST of mRNA_P-wetherbeei_contig52235.1.1 vs. uniprot
Match: A0A0R3C8N4_9BRAD (Uncharacterized protein n=13 Tax=Bradyrhizobium TaxID=374 RepID=A0A0R3C8N4_9BRAD) HSP 1 Score: 55.5 bits (132), Expect = 1.490e-8 Identity = 30/62 (48.39%), Postives = 41/62 (66.13%), Query Frame = 1
Query: 25 WPASRQDDAAELLLALD-RLGGPTYVASEEELATIDEALAEVERGEFATDVEVEAAFARFRR 207
WP Q++ + ++ L G YVA++EEL +ID ALA ++RGEFATD EV FA+FRR
Sbjct: 16 WPEEAQNELVAIASEIESELLGGEYVATQEELRSIDAALASIDRGEFATDAEVAEVFAKFRR 77
BLAST of mRNA_P-wetherbeei_contig52235.1.1 vs. uniprot
Match: A0A6L9MLF3_9HYPH (Uncharacterized protein n=1 Tax=Aurantimonas aggregata TaxID=2047720 RepID=A0A6L9MLF3_9HYPH) HSP 1 Score: 55.1 bits (131), Expect = 1.970e-8 Identity = 32/69 (46.38%), Postives = 46/69 (66.67%), Query Frame = 1
Query: 1 KALAAVSRWPASRQDDAAELLLALDRLGGPTYVASEEELATIDEALAEVERGEFATDVEVEAAFARFRR 207
+A+A V PA +QD+ A +LL L GP Y + EE A++ +LAE ERGEFATD +V+A +A++ R
Sbjct: 7 QAVARVRALPADQQDEFARVLLRLAGDDGPVYQLTPEENASLAGSLAEAERGEFATDEQVQAVWAKYNR 75
BLAST of mRNA_P-wetherbeei_contig52235.1.1 vs. uniprot
Match: A0A537PTD5_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537PTD5_9PROT) HSP 1 Score: 54.3 bits (129), Expect = 4.260e-8 Identity = 30/64 (46.88%), Postives = 41/64 (64.06%), Query Frame = 1
Query: 16 VSRWPASRQDDAAELLLALD-RLGGPTYVASEEELATIDEALAEVERGEFATDVEVEAAFARFR 204
V WP + QD+ + ++ L YVA+ EEL ID ALA ++ G+FA+D EVEAAFA+FR
Sbjct: 13 VQTWPEAAQDELVAVAKQIESELQANEYVATREELQNIDAALASIDGGDFASDAEVEAAFAKFR 76
BLAST of mRNA_P-wetherbeei_contig52235.1.1 vs. uniprot
Match: A0A849IGW6_9HYPH (Uncharacterized protein n=1 Tax=Enterovirga sp. DB1703 TaxID=2730920 RepID=A0A849IGW6_9HYPH) HSP 1 Score: 53.5 bits (127), Expect = 8.170e-8 Identity = 28/63 (44.44%), Postives = 39/63 (61.90%), Query Frame = 1
Query: 16 VSRWPASRQDDAAELLLALDRLGGPTYVASEEELATIDEALAEVERGEFATDVEVEAAFARFR 204
V WP RQ+DA +LL ++ + SEE+LA ++EA E+ERGE A+D EV A R+R
Sbjct: 13 VKTWPPERQEDAVRILLRMEEIDAEGSGLSEEDLAALEEAEMEIERGEVASDEEVRALLDRYR 75
BLAST of mRNA_P-wetherbeei_contig52235.1.1 vs. uniprot
Match: A0A1F2XPL8_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium RBG_16_64_48 TaxID=1797215 RepID=A0A1F2XPL8_9PROT) HSP 1 Score: 53.5 bits (127), Expect = 8.370e-8 Identity = 30/62 (48.39%), Postives = 40/62 (64.52%), Query Frame = 1
Query: 25 WPASRQDDAAELLLALDR-LGGPTYVASEEELATIDEALAEVERGEFATDVEVEAAFARFRR 207
WP S Q D A+ L ++R L TY A+ EE+A I+ L E E G+FAT+ EVEA A++RR
Sbjct: 16 WPESAQVDLAQAALEIERELQQDTYTATPEEVAAIERGLKEAELGQFATEAEVEAVLAKYRR 77 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52235.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52235.1.1 >prot_P-wetherbeei_contig52235.1.1 ID=prot_P-wetherbeei_contig52235.1.1|Name=mRNA_P-wetherbeei_contig52235.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=70bp KALAAVSRWPASRQDDAAELLLALDRLGGPTYVASEEELATIDEALAEVEback to top mRNA from alignment at P-wetherbeei_contig52235:1..210+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52235.1.1 ID=mRNA_P-wetherbeei_contig52235.1.1|Name=mRNA_P-wetherbeei_contig52235.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=210bp|location=Sequence derived from alignment at P-wetherbeei_contig52235:1..210+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52235:1..210+ >mRNA_P-wetherbeei_contig52235.1.1 ID=mRNA_P-wetherbeei_contig52235.1.1|Name=mRNA_P-wetherbeei_contig52235.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=210bp|location=Sequence derived from alignment at P-wetherbeei_contig52235:1..210+ (Phaeothamnion wetherbeei SAG_119_79)back to top |