prot_P-wetherbeei_contig52231.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52231.1.1 vs. uniprot
Match: UPI00083A90E3 (sigma-70 family RNA polymerase sigma factor n=1 Tax=Phenylobacterium sp. CCH9-H3 TaxID=1768774 RepID=UPI00083A90E3) HSP 1 Score: 51.6 bits (122), Expect = 1.670e-6 Identity = 22/41 (53.66%), Postives = 30/41 (73.17%), Query Frame = 0
Query: 17 DKGLDLLYRRYSGWLTGMLRRRFGASIGDSADDLVQETYVR 57
+ LD LYR Y+GWL L RRFG ++ ++A+DLVQE Y+R
Sbjct: 12 EASLDGLYRLYAGWLRRALHRRFGRAVAETAEDLVQEAYLR 52
BLAST of mRNA_P-wetherbeei_contig52231.1.1 vs. uniprot
Match: UPI0018E2B3F1 (RNA polymerase sigma factor n=2 Tax=Caulobacter hibisci TaxID=2035993 RepID=UPI0018E2B3F1) HSP 1 Score: 51.2 bits (121), Expect = 2.340e-6 Identity = 23/50 (46.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query: 8 PIASPQPGEDKGLDLLYRRYSGWLTGMLRRRFGASIGDSADDLVQETYVR 57
P P P LD ++RRY GWL+ MLR+R+GA+ +A+DL Q+T++R
Sbjct: 6 PAFEPSPKLSAALDRVFRRYHGWLSTMLRKRYGAA---AAEDLAQDTFLR 52
BLAST of mRNA_P-wetherbeei_contig52231.1.1 vs. uniprot
Match: UPI0018F8768E (RNA polymerase sigma factor n=1 Tax=Allosphingosinicella vermicomposti TaxID=614671 RepID=UPI0018F8768E) HSP 1 Score: 50.8 bits (120), Expect = 3.570e-6 Identity = 29/56 (51.79%), Postives = 36/56 (64.29%), Query Frame = 0
Query: 3 RTQRRPIASP-QPGEDKGLDLLYRRYSGWLTGMLRRRFGASIGDSADDLVQETYVR 57
R +R+ A+P QP +DLLYRRYSGWL ML R + + DD+VQETYVR
Sbjct: 4 RDERKARAAPLQPEAVSAVDLLYRRYSGWLNRMLSLRLRTTSVE-VDDIVQETYVR 58
BLAST of mRNA_P-wetherbeei_contig52231.1.1 vs. uniprot
Match: A0A840A1Y4_9CAUL (RNA polymerase sigma-70 factor (ECF subfamily) n=1 Tax=Phenylobacterium haematophilum TaxID=98513 RepID=A0A840A1Y4_9CAUL) HSP 1 Score: 50.4 bits (119), Expect = 4.870e-6 Identity = 23/40 (57.50%), Postives = 29/40 (72.50%), Query Frame = 0
Query: 18 KGLDLLYRRYSGWLTGMLRRRFGASIGDSADDLVQETYVR 57
+ L +LYRRYSGWL MLRRR+G +D+VQETY+R
Sbjct: 24 ESLSVLYRRYSGWLKAMLRRRYGID----GEDVVQETYIR 59
BLAST of mRNA_P-wetherbeei_contig52231.1.1 vs. uniprot
Match: UPI001F5B0045 (RNA polymerase sigma factor n=1 Tax=Sphingobium sp. Sx8-8 TaxID=2933617 RepID=UPI001F5B0045) HSP 1 Score: 48.1 bits (113), Expect = 2.860e-5 Identity = 22/38 (57.89%), Postives = 29/38 (76.32%), Query Frame = 0
Query: 20 LDLLYRRYSGWLTGMLRRRFGASIGDSADDLVQETYVR 57
+D LYR +SGWL GML+RRF A +G +DLV +TY+R
Sbjct: 2 IDRLYRNHSGWLLGMLQRRF-AGMGLEPEDLVHDTYIR 38
BLAST of mRNA_P-wetherbeei_contig52231.1.1 vs. uniprot
Match: A0A2W6XCI1_9CAUL (RNA polymerase subunit sigma-70 n=3 Tax=unclassified Brevundimonas TaxID=2622653 RepID=A0A2W6XCI1_9CAUL) HSP 1 Score: 47.4 bits (111), Expect = 7.700e-5 Identity = 23/41 (56.10%), Postives = 27/41 (65.85%), Query Frame = 0
Query: 17 DKGLDLLYRRYSGWLTGMLRRRFGASIGDSADDLVQETYVR 57
D GL LYR YSGWL G LR+RFG D +DL QE ++R
Sbjct: 33 DAGLHDLYRAYSGWLKGRLRKRFG----DETEDLAQEAWLR 69 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52231.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 6
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-wetherbeei_contig52231.1.1 ID=prot_P-wetherbeei_contig52231.1.1|Name=mRNA_P-wetherbeei_contig52231.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=57bpback to top |