prot_P-wetherbeei_contig52204.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig52204.3.1
Unique Nameprot_P-wetherbeei_contig52204.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length51
Homology
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BLAST of mRNA_P-wetherbeei_contig52204.3.1 vs. uniprot
Match: A0A5E8VDY6_9BRAD (Uncharacterized protein n=1 Tax=Bradyrhizobium sp. LVM 105 TaxID=2341115 RepID=A0A5E8VDY6_9BRAD)

HSP 1 Score: 46.2 bits (108), Expect = 6.390e-5
Identity = 24/46 (52.17%), Postives = 29/46 (63.04%), Query Frame = 0 
Query:    1 NEGVGEHVRTRLQPGFLGPVKLRS---KDSAPNEESLFLLPDRSPE 43
            NEGVGEHVRTR         ++     + +APNEE+LFLLPDR  E
Sbjct:   65 NEGVGEHVRTRFHVDPKAACEIAEPLFRRTAPNEENLFLLPDRQSE 110
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52204.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A5E8VDY6_9BRAD6.390e-552.17Uncharacterized protein n=1 Tax=Bradyrhizobium sp.... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig52204contigP-wetherbeei_contig52204:348..516 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig52204.3.1mRNA_P-wetherbeei_contig52204.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig52204 348..545 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig52204.3.1 ID=prot_P-wetherbeei_contig52204.3.1|Name=mRNA_P-wetherbeei_contig52204.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=51bp
NEGVGEHVRTRLQPGFLGPVKLRSKDSAPNEESLFLLPDRSPESRSSRLT
*
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