prot_P-wetherbeei_contig52106.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig52106.1.1
Unique Nameprot_P-wetherbeei_contig52106.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length74
Homology
BLAST of mRNA_P-wetherbeei_contig52106.1.1 vs. uniprot
Match: A0A0S8DHS3_9PROT (C4-dicarboxylate ABC transporter n=1 Tax=Betaproteobacteria bacterium SG8_40 TaxID=1703389 RepID=A0A0S8DHS3_9PROT)

HSP 1 Score: 130 bits (328), Expect = 1.770e-34
Identity = 68/73 (93.15%), Postives = 72/73 (98.63%), Query Frame = 0
Query:    1 MFIFMGTMLERSGVANDLLHCLQVLLRRVPGGLAISVTLMGTIMAATTGIVGASVVMLTMIALPSMLERGYNK 73
            MFIFMGTMLERSGVANDLLHCLQVL RR+PGGLA+SVTLMGTIMAATTGIVGASVVMLTMIALPSML+RGY+K
Sbjct:   74 MFIFMGTMLERSGVANDLLHCLQVLTRRIPGGLAMSVTLMGTIMAATTGIVGASVVMLTMIALPSMLQRGYDK 146          
BLAST of mRNA_P-wetherbeei_contig52106.1.1 vs. uniprot
Match: UPI0019AEFD40 (TRAP transporter large permease subunit n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=UPI0019AEFD40)

HSP 1 Score: 129 bits (325), Expect = 4.800e-34
Identity = 67/73 (91.78%), Postives = 73/73 (100.00%), Query Frame = 0
Query:    1 MFIFMGTMLERSGVANDLLHCLQVLLRRVPGGLAISVTLMGTIMAATTGIVGASVVMLTMIALPSMLERGYNK 73
            MFIFMGT+LERSGVANDLLHCLQVLLRRVPGGLA+SVTLMGTIMAATTGIVGASVVMLT+IALP+M+ERGY+K
Sbjct:   74 MFIFMGTVLERSGVANDLLHCLQVLLRRVPGGLAMSVTLMGTIMAATTGIVGASVVMLTLIALPAMMERGYSK 146          
BLAST of mRNA_P-wetherbeei_contig52106.1.1 vs. uniprot
Match: A0A381W6E0_9ZZZZ (DctM domain-containing protein n=5 Tax=root TaxID=1 RepID=A0A381W6E0_9ZZZZ)

HSP 1 Score: 125 bits (313), Expect = 2.400e-32
Identity = 63/72 (87.50%), Postives = 70/72 (97.22%), Query Frame = 0
Query:    1 MFIFMGTMLERSGVANDLLHCLQVLLRRVPGGLAISVTLMGTIMAATTGIVGASVVMLTMIALPSMLERGYN 72
            MFIFMGTMLERSGVANDLLHCLQVLLRR PGGLA+SVT+MGTIMAATTGI+GASVVM+T++ALP MLERGY+
Sbjct:   73 MFIFMGTMLERSGVANDLLHCLQVLLRRTPGGLALSVTIMGTIMAATTGIIGASVVMMTLLALPVMLERGYH 144          
BLAST of mRNA_P-wetherbeei_contig52106.1.1 vs. uniprot
Match: A0A2E1TJ10_9PROT (C4-dicarboxylate ABC transporter n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2E1TJ10_9PROT)

HSP 1 Score: 125 bits (313), Expect = 2.570e-32
Identity = 65/72 (90.28%), Postives = 71/72 (98.61%), Query Frame = 0
Query:    1 MFIFMGTMLERSGVANDLLHCLQVLLRRVPGGLAISVTLMGTIMAATTGIVGASVVMLTMIALPSMLERGYN 72
            MFIFMGTMLE+SGVA+DLLHCLQVLLRR+PGGLA+SVT+MGTIMAATTGIVGASVVMLTMIALPSMLER Y+
Sbjct:   75 MFIFMGTMLEKSGVADDLLHCLQVLLRRIPGGLAMSVTIMGTIMAATTGIVGASVVMLTMIALPSMLERKYD 146          
BLAST of mRNA_P-wetherbeei_contig52106.1.1 vs. uniprot
Match: A0A6L7XLE8_9PROT (TRAP transporter large permease subunit n=2 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6L7XLE8_9PROT)

HSP 1 Score: 123 bits (308), Expect = 1.260e-31
Identity = 63/72 (87.50%), Postives = 70/72 (97.22%), Query Frame = 0
Query:    1 MFIFMGTMLERSGVANDLLHCLQVLLRRVPGGLAISVTLMGTIMAATTGIVGASVVMLTMIALPSMLERGYN 72
            MFIFMGTMLERSGVANDLLHCLQVLLRRVPGGLA+SVT+MGTIMAATTGI+GASVVM+T++ALP MLER Y+
Sbjct:   74 MFIFMGTMLERSGVANDLLHCLQVLLRRVPGGLAMSVTIMGTIMAATTGIIGASVVMMTLLALPVMLERKYH 145          
BLAST of mRNA_P-wetherbeei_contig52106.1.1 vs. uniprot
Match: UPI00187225F7 (TRAP transporter large permease subunit n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI00187225F7)

HSP 1 Score: 123 bits (308), Expect = 1.270e-31
Identity = 63/72 (87.50%), Postives = 70/72 (97.22%), Query Frame = 0
Query:    1 MFIFMGTMLERSGVANDLLHCLQVLLRRVPGGLAISVTLMGTIMAATTGIVGASVVMLTMIALPSMLERGYN 72
            MFIFMGTMLERSGVA+DLLHCLQVLLRRVPGGLA+SVTLMGTIMAATTGI+GASVVM+T++ALP ML+R YN
Sbjct:   75 MFIFMGTMLERSGVASDLLHCLQVLLRRVPGGLALSVTLMGTIMAATTGIIGASVVMMTLLALPVMLKRDYN 146          
BLAST of mRNA_P-wetherbeei_contig52106.1.1 vs. uniprot
Match: A0A382ZMJ2_9ZZZZ (DctM domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382ZMJ2_9ZZZZ)

HSP 1 Score: 118 bits (296), Expect = 2.390e-31
Identity = 59/72 (81.94%), Postives = 68/72 (94.44%), Query Frame = 0
Query:    1 MFIFMGTMLERSGVANDLLHCLQVLLRRVPGGLAISVTLMGTIMAATTGIVGASVVMLTMIALPSMLERGYN 72
            MFIFMGTMLE+SGVA DLLHCLQVLL+R PGGLA+SVT+MGTIMAATTGI+GASVVM++++ALP MLERGY 
Sbjct:    4 MFIFMGTMLEKSGVATDLLHCLQVLLKRTPGGLALSVTIMGTIMAATTGIIGASVVMMSLLALPVMLERGYQ 75          
BLAST of mRNA_P-wetherbeei_contig52106.1.1 vs. uniprot
Match: A0A2S6RI43_9PROT (C4-dicarboxylate TRAP transporter large permease protein DctM n=1 Tax=Alphaproteobacteria bacterium MarineAlpha9_Bin1 TaxID=2013096 RepID=A0A2S6RI43_9PROT)

HSP 1 Score: 122 bits (306), Expect = 2.470e-31
Identity = 62/72 (86.11%), Postives = 70/72 (97.22%), Query Frame = 0
Query:    1 MFIFMGTMLERSGVANDLLHCLQVLLRRVPGGLAISVTLMGTIMAATTGIVGASVVMLTMIALPSMLERGYN 72
            MFIFMGTMLERSGVANDLL+CLQVLLRRVPGGLA+SVT+MGT+MAATTGI+GASVVM+T++ALP MLER YN
Sbjct:   75 MFIFMGTMLERSGVANDLLNCLQVLLRRVPGGLALSVTIMGTVMAATTGIIGASVVMMTLLALPVMLERQYN 146          
BLAST of mRNA_P-wetherbeei_contig52106.1.1 vs. uniprot
Match: A0A843RCR3_9PROT (TRAP transporter large permease subunit n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A843RCR3_9PROT)

HSP 1 Score: 122 bits (305), Expect = 3.430e-31
Identity = 61/73 (83.56%), Postives = 71/73 (97.26%), Query Frame = 0
Query:    1 MFIFMGTMLERSGVANDLLHCLQVLLRRVPGGLAISVTLMGTIMAATTGIVGASVVMLTMIALPSMLERGYNK 73
            MFIFMGTMLERSGVANDLL+CLQVLLRR+PGGLA+SVTLMGTIMAATTGI+GASVVM+T++ALP M+++ YNK
Sbjct:   75 MFIFMGTMLERSGVANDLLNCLQVLLRRIPGGLALSVTLMGTIMAATTGIIGASVVMMTLLALPVMVQQNYNK 147          
BLAST of mRNA_P-wetherbeei_contig52106.1.1 vs. uniprot
Match: UPI00141D79AA (TRAP transporter large permease subunit n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI00141D79AA)

HSP 1 Score: 122 bits (305), Expect = 3.430e-31
Identity = 62/72 (86.11%), Postives = 70/72 (97.22%), Query Frame = 0
Query:    1 MFIFMGTMLERSGVANDLLHCLQVLLRRVPGGLAISVTLMGTIMAATTGIVGASVVMLTMIALPSMLERGYN 72
            MFIFMGTMLERSGVA+DLLHCLQVLLRRVPGGLA+SVTLMGTIMAATTGI+GASVVM+T++ALP ML++ YN
Sbjct:   75 MFIFMGTMLERSGVASDLLHCLQVLLRRVPGGLALSVTLMGTIMAATTGIIGASVVMMTLLALPVMLKQSYN 146          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52106.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0S8DHS3_9PROT1.770e-3493.15C4-dicarboxylate ABC transporter n=1 Tax=Betaprote... [more]
UPI0019AEFD404.800e-3491.78TRAP transporter large permease subunit n=1 Tax=Pr... [more]
A0A381W6E0_9ZZZZ2.400e-3287.50DctM domain-containing protein n=5 Tax=root TaxID=... [more]
A0A2E1TJ10_9PROT2.570e-3290.28C4-dicarboxylate ABC transporter n=1 Tax=Proteobac... [more]
A0A6L7XLE8_9PROT1.260e-3187.50TRAP transporter large permease subunit n=2 Tax=Rh... [more]
UPI00187225F71.270e-3187.50TRAP transporter large permease subunit n=1 Tax=Pe... [more]
A0A382ZMJ2_9ZZZZ2.390e-3181.94DctM domain-containing protein (Fragment) n=1 Tax=... [more]
A0A2S6RI43_9PROT2.470e-3186.11C4-dicarboxylate TRAP transporter large permease p... [more]
A0A843RCR3_9PROT3.430e-3183.56TRAP transporter large permease subunit n=1 Tax=Ki... [more]
UPI00141D79AA3.430e-3186.11TRAP transporter large permease subunit n=1 Tax=Pe... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010656TRAP C4-dicarboxylate transport system permease DctM subunitPFAMPF06808DctMcoord: 1..72
e-value: 4.1E-13
score: 49.0
NoneNo IPR availablePANTHERPTHR33362:SF7SLL1103 PROTEINcoord: 1..73
IPR004681TRAP transporter large membrane protein DctMPANTHERPTHR33362SIALIC ACID TRAP TRANSPORTER PERMEASE PROTEIN SIAT-RELATEDcoord: 1..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig52106contigP-wetherbeei_contig52106:102..323 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig52106.1.1mRNA_P-wetherbeei_contig52106.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig52106 3..536 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig52106.1.1 ID=prot_P-wetherbeei_contig52106.1.1|Name=mRNA_P-wetherbeei_contig52106.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=74bp
MFIFMGTMLERSGVANDLLHCLQVLLRRVPGGLAISVTLMGTIMAATTGI
VGASVVMLTMIALPSMLERGYNK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010656DctM
IPR004681TRAP_DctM