prot_P-wetherbeei_contig52007.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig52007.1.1
Unique Nameprot_P-wetherbeei_contig52007.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length179
Homology
BLAST of mRNA_P-wetherbeei_contig52007.1.1 vs. uniprot
Match: A0A085K404_SPHYA (Tyr recombinase domain-containing protein n=7 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A085K404_SPHYA)

HSP 1 Score: 359 bits (922), Expect = 6.950e-122
Identity = 174/179 (97.21%), Postives = 175/179 (97.77%), Query Frame = 0
Query:    1 MVSAAGEGGGRLHRSGPNAMHRYQRELLRDYLLFMANSGLRPNEARQLCWRDLRIEKDAENKPALVVEVAPTTKTGARTVVCREGTQTYLDRLKKLSRHSAPDDLVFCGYDGKPVENFNKTFASILSRLKLLDDRWGKRRTVYSLRHFYCTQCLLSGIPVHVLAKNMGTSITYIEKHYS 179
            MVS A EGGGRLHRSGPNAMHRYQRELLRDYLLFMANSGLRPNEARQLCWRDLRIEKD ENKPALVVEVAPTTKTGARTVVCREGTQTYLDRLKKLSRHS PDDLVFCGYDGKPVENFNKTFASILSRLKLLDDRWGKRRTVYSLRHFYCTQCLL+GIPVHVLAKNMGTSITYIEKHYS
Sbjct:  233 MVSTAEEGGGRLHRSGPNAMHRYQRELLRDYLLFMANSGLRPNEARQLCWRDLRIEKDTENKPALVVEVAPTTKTGARTVVCREGTQTYLDRLKKLSRHSQPDDLVFCGYDGKPVENFNKTFASILSRLKLLDDRWGKRRTVYSLRHFYCTQCLLTGIPVHVLAKNMGTSITYIEKHYS 411          
BLAST of mRNA_P-wetherbeei_contig52007.1.1 vs. uniprot
Match: UPI001F3020DA (site-specific integrase n=2 Tax=Acidocella facilis TaxID=525 RepID=UPI001F3020DA)

HSP 1 Score: 338 bits (867), Expect = 2.780e-116
Identity = 163/179 (91.06%), Postives = 169/179 (94.41%), Query Frame = 0
Query:    1 MVSAAGEGGGRLHRSGPNAMHRYQRELLRDYLLFMANSGLRPNEARQLCWRDLRIEKDAENKPALVVEVAPTTKTGARTVVCREGTQTYLDRLKKLSRHSAPDDLVFCGYDGKPVENFNKTFASILSRLKLLDDRWGKRRTVYSLRHFYCTQCLLSGIPVHVLAKNMGTSITYIEKHYS 179
            +V    E GGRLHRSGPNAMHRYQRELLR+YLLFMANSGLRPNEARQLCW+DLRIEKD ENKPALVVEVAPTTKTGARTVVCREGTQ YLDRLK+LSRH  P DLVFCGYDGKPVENFNKTFASILSRLKLLDDRWGKRRTVYSLRHFYCTQCLLSGIPVH+LAKNMGTSI+YIEKHYS
Sbjct:   44 LVLTPEERGGRLHRSGPNAMHRYQRELLRNYLLFMANSGLRPNEARQLCWQDLRIEKDTENKPALVVEVAPTTKTGARTVVCREGTQAYLDRLKQLSRHVEPGDLVFCGYDGKPVENFNKTFASILSRLKLLDDRWGKRRTVYSLRHFYCTQCLLSGIPVHILAKNMGTSISYIEKHYS 222          
BLAST of mRNA_P-wetherbeei_contig52007.1.1 vs. uniprot
Match: A0A0D6PC54_9PROT (Integrase n=1 Tax=Acidocella aminolytica 101 = DSM 11237 TaxID=1120923 RepID=A0A0D6PC54_9PROT)

HSP 1 Score: 338 bits (867), Expect = 1.380e-113
Identity = 163/179 (91.06%), Postives = 169/179 (94.41%), Query Frame = 0
Query:    1 MVSAAGEGGGRLHRSGPNAMHRYQRELLRDYLLFMANSGLRPNEARQLCWRDLRIEKDAENKPALVVEVAPTTKTGARTVVCREGTQTYLDRLKKLSRHSAPDDLVFCGYDGKPVENFNKTFASILSRLKLLDDRWGKRRTVYSLRHFYCTQCLLSGIPVHVLAKNMGTSITYIEKHYS 179
            +V    E GGRLHRSGPNAMHRYQRELLR+YLLFMANSGLRPNEARQLCW+DLRIEKD ENKPALVVEVAPTTKTGARTVVCREGTQ YLDRLK+LSRH  P DLVFCGYDGKPVENFNKTFASILSRLKLLDDRWGKRRTVYSLRHFYCTQCLLSGIPVH+LAKNMGTSI+YIEKHYS
Sbjct:  230 LVLTPEERGGRLHRSGPNAMHRYQRELLRNYLLFMANSGLRPNEARQLCWQDLRIEKDTENKPALVVEVAPTTKTGARTVVCREGTQAYLDRLKQLSRHIEPGDLVFCGYDGKPVENFNKTFASILSRLKLLDDRWGKRRTVYSLRHFYCTQCLLSGIPVHILAKNMGTSISYIEKHYS 408          
BLAST of mRNA_P-wetherbeei_contig52007.1.1 vs. uniprot
Match: A0A522A3Z9_9PROT (Tyr recombinase domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A522A3Z9_9PROT)

HSP 1 Score: 288 bits (737), Expect = 9.040e-94
Identity = 132/178 (74.16%), Postives = 156/178 (87.64%), Query Frame = 0
Query:    2 VSAAGEGGGRLHRSGPNAMHRYQRELLRDYLLFMANSGLRPNEARQLCWRDLRIEKDAENKPALVVEVAPTTKTGARTVVCREGTQTYLDRLKKLSRHSAPDDLVFCGYDGKPVENFNKTFASILSRLKLLDDRWGKRRTVYSLRHFYCTQCLLSGIPVHVLAKNMGTSITYIEKHYS 179
            +S+ G  GG+LHRSGP+A+HR QRE+LR YLLFMANSGLRPNEARQL WRD+R E+D +  PALV+EVAPTTKTGARTVVCREGT  YL RLKKL++H+ PDD +FCG+DG+PV+NFN TF  +LS + LLDDRWGKRR++YSLRHFYCTQ LLSG+P+HVLAKNMGTSI YIE+HYS
Sbjct:  232 ISSKGANGGKLHRSGPHALHRLQREMLRHYLLFMANSGLRPNEARQLLWRDIREEEDEDGTPALVIEVAPTTKTGARTVVCREGTMHYLTRLKKLAKHTEPDDHIFCGFDGEPVDNFNNTFKKLLSGIGLLDDRWGKRRSIYSLRHFYCTQSLLSGVPIHVLAKNMGTSIAYIEQHYS 409          
BLAST of mRNA_P-wetherbeei_contig52007.1.1 vs. uniprot
Match: UPI00087FA89A (tyrosine-type recombinase/integrase n=1 Tax=Bosea robiniae TaxID=1036780 RepID=UPI00087FA89A)

HSP 1 Score: 170 bits (430), Expect = 8.360e-48
Identity = 86/166 (51.81%), Postives = 114/166 (68.67%), Query Frame = 0
Query:   14 RSGPNAMHRYQRELLRDYLLFMANSGLRPNEARQLCWRDLRIEKDAENKPALVVEVAPTTKTGARTVVCREGTQTYLDRLKKLSRHSAPDDLVFCGYDGKPVENFNKTFASILSRLKLLDDRWGKRRTVYSLRHFYCT-QCLLSGIPVHVLAKNMGTSITYIEKHY 178
            + GP+ +HR+QRELLR+Y++FM +SGLRPNEARQL W D+   +DA+    +V+ +AP TKTGAR  V      T L+R+K  S H+ PDDLVFC   G+ VENF KTF S+L++L +L  R+GK RT+YSLR+ Y T +    GI    LA NMGTS T + +HY
Sbjct:  245 KKGPHELHRWQRELLRNYVVFMGSSGLRPNEARQLRWCDVTRHQDAKGNAYVVLHIAPDTKTGARECVPLRNVPTLLERIKASSNHTQPDDLVFCNRKGEAVENFGKTFKSVLNKLGMLKSRFGKDRTIYSLRNTYATFRIRYGGIEFDDLASNMGTSPTILFRHY 410          
BLAST of mRNA_P-wetherbeei_contig52007.1.1 vs. uniprot
Match: A0A0Q6CHG8_9HYPH (Tyr recombinase domain-containing protein n=2 Tax=unclassified Aureimonas TaxID=2615206 RepID=A0A0Q6CHG8_9HYPH)

HSP 1 Score: 166 bits (421), Expect = 1.970e-46
Identity = 85/163 (52.15%), Postives = 106/163 (65.03%), Query Frame = 0
Query:   17 PNAMHRYQRELLRDYLLFMANSGLRPNEARQLCWRDLRIEKDAENKPALVVEVAPTTKTGARTVVCREGTQTYLDRLKKLSRHSAPDDLVFCGYDGKPVENFNKTFASILSRLKLLDDRWGKRRTVYSLRHFYCTQCLL-SGIPVHVLAKNMGTSITYIEKHY 178
            PN  H + RELLR Y+LFM  SGLRPNEARQL WRD+    D +    +V+ VAPTTKTG R  +        +DRLK  S  +APD+LVFC   G P++NF KTF ++L R  LL DR+G+ RT+YSLRH YCT  LL S + +  LA+N+GTS   I  HY
Sbjct:  253 PNGFHLWHRELLRSYVLFMGASGLRPNEARQLRWRDIATHTDEQGTKHIVLYVAPTTKTGERETIPLRNAWVIIDRLKAASSFTAPDNLVFCDRSGAPIDNFGKTFKALLIRCNLLKDRFGRDRTIYSLRHTYCTLKLLHSDVKIEDLAQNLGTSPATIFAHY 415          
BLAST of mRNA_P-wetherbeei_contig52007.1.1 vs. uniprot
Match: A0A2E4XVT6_9PROT (Tyr recombinase domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4XVT6_9PROT)

HSP 1 Score: 164 bits (415), Expect = 2.010e-46
Identity = 87/171 (50.88%), Postives = 111/171 (64.91%), Query Frame = 0
Query:    9 GGRLHRSGPNAMHRYQRELLRDYLLFMANSGLRPNEARQLCWRDLRIEKDAENKPALVVEVAPTTKTGARTVVCREGTQTYLDRLKKLSRHSAPDDLVFCGYDGKPVENFNKTFASILSRLKLLDDRWGKRRTVYSLRHFYCTQCLLSG-IPVHVLAKNMGTSITYIEKHY 178
            GGR HR     +H +QR +LR+Y+LFM  SGLRPNEARQL WRD+    D      +++ ++PTTKTGAR  V     + YLD++K +S+ +  DDLVFC  DG+PV N+ KTF  IL    LL+DR+GK RT+YSLRH Y T  L  G   +  LA+NMGTS T I  HY
Sbjct:  157 GGRSHR-----LHIWQRRMLRNYILFMGTSGLRPNEARQLRWRDVGSIIDENGTEQVLLHISPTTKTGARECVPLRSAKRYLDQIKTISKFTNDDDLVFCNQDGEPVSNYGKTFKKILKETNLLEDRFGKPRTIYSLRHTYATFRLYYGRANIEDLAQNMGTSPTQIFNHY 322          
BLAST of mRNA_P-wetherbeei_contig52007.1.1 vs. uniprot
Match: UPI001674002E (tyrosine-type recombinase/integrase n=1 Tax=Thalassobaculum fulvum TaxID=1633335 RepID=UPI001674002E)

HSP 1 Score: 164 bits (416), Expect = 1.030e-45
Identity = 81/175 (46.29%), Postives = 118/175 (67.43%), Query Frame = 0
Query:    5 AGEGGGRLHRSGPNAMHRYQRELLRDYLLFMANSGLRPNEARQLCWRDLRIEKDAENKPALVVEVAPTTKTGARTVVCREGTQTYLDRLKKLSRHSAPDDLVFCGYDGKPVENFNKTFASILSRLKLLDDRWGKRRTVYSLRHFYCTQCLLSG-IPVHVLAKNMGTSITYIEKHY 178
            +G  GGR  +   +++H +QR+LLR+Y+L M  +GLRPNEARQL W+D+++ ++  +   + + V+PTTKTG R  +     +  L+R++  S H+ PDD VFCG DG P+ENF KTF S+L+   LL DR+G+ RT+YSLRH Y T  +L G + +  LA+NMGTS   I +HY
Sbjct:  239 SGSDGGRSPKRSAHSLHLWQRQLLRNYVLIMGMTGLRPNEARQLRWKDVQVIQNGNDHTFVALHVSPTTKTGERLCIPLARCRDVLERVRAASTHTQPDDFVFCGRDGTPIENFGKTFKSVLTEAGLLKDRFGRVRTIYSLRHTYATLRILHGSVSIDDLAQNMGTSPAIIFQHY 413          
BLAST of mRNA_P-wetherbeei_contig52007.1.1 vs. uniprot
Match: A0A2E2E2F4_9PROT (Tyr recombinase domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E2E2F4_9PROT)

HSP 1 Score: 163 bits (413), Expect = 1.160e-45
Identity = 84/169 (49.70%), Postives = 112/169 (66.27%), Query Frame = 0
Query:   12 LHRSGPNAMHRYQRELLRDYLLFMANSGLRPNEARQLCWRDLRIEKDAENKPALVVEVAPTTKTGARTVVCREGTQTYLDRLKKLSRHSAPDDLVFCGYDGKPVENFNKTFASILSRLKLLDDRWGKRRTVYSLRHFYCTQCLLSG-IPVHVLAKNMGTSITYIEKHYS 179
            + + GP++ H +QR ++R+Y+LFMA SGLRPNEA+QL WRD    K  +    LV+ V  TTKTG R  V    T+  LDRL+ LS ++  DDLVFC ++G PV+NF KTF  +L ++ +L D+ G+ RT+YSLRH Y T  LL G   V  LA+NMGTS   I+ HYS
Sbjct:  202 IRKRGPHSRHLFQRNMIRNYILFMAMSGLRPNEAKQLKWRDFSNFKTEDGIDHLVIHVPETTKTGGRACVPLRSTKRVLDRLRSLSPNNRNDDLVFCDFEGNPVQNFGKTFKKLLIQMDMLHDKSGQARTIYSLRHTYATFRLLYGHARVDDLARNMGTSPALIQNHYS 370          
BLAST of mRNA_P-wetherbeei_contig52007.1.1 vs. uniprot
Match: A0A0Q8BCD1_9HYPH (Uncharacterized protein n=1 Tax=Mesorhizobium sp. Root157 TaxID=1736477 RepID=A0A0Q8BCD1_9HYPH)

HSP 1 Score: 163 bits (413), Expect = 3.030e-45
Identity = 86/163 (52.76%), Postives = 108/163 (66.26%), Query Frame = 0
Query:   18 NAMHRYQRELLRDYLLFMANSGLRPNEARQLCWRDLRIEKDAENKPALVVEVAPTTKTGARTVVCREGTQTYLDRLKKLSRHSAPDDLVFCGYDGKPVENFNKTFASILSRLKLLDDRWGKRRTVYSLRHFYCT-QCLLSGIPVHVLAKNMGTSITYIEKHYS 179
            N +H Y R LLR+Y+LFM  SGLRPNEARQL WRDL+I+KD +    L + +APTTKTG RT V        + R+++ +  + PDD VF   DG+PVENF KTF S+L    LL D +G+ RT+YSLRH Y T +   S I +H LAKNMGTS T +  HYS
Sbjct:  255 NGVHIYHRHLLRNYVLFMQASGLRPNEARQLRWRDLKIKKDRKGIDQLHLNIAPTTKTGERTCVTLHNAIEIVARMREQNNRTGPDDFVFSDRDGRPVENFGKTFKSVLDAAGLLTDSFGQVRTIYSLRHTYATFRIANSDISLHDLAKNMGTSPTTLFSHYS 417          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52007.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A085K404_SPHYA6.950e-12297.21Tyr recombinase domain-containing protein n=7 Tax=... [more]
UPI001F3020DA2.780e-11691.06site-specific integrase n=2 Tax=Acidocella facilis... [more]
A0A0D6PC54_9PROT1.380e-11391.06Integrase n=1 Tax=Acidocella aminolytica 101 = DSM... [more]
A0A522A3Z9_9PROT9.040e-9474.16Tyr recombinase domain-containing protein n=1 Tax=... [more]
UPI00087FA89A8.360e-4851.81tyrosine-type recombinase/integrase n=1 Tax=Bosea ... [more]
A0A0Q6CHG8_9HYPH1.970e-4652.15Tyr recombinase domain-containing protein n=2 Tax=... [more]
A0A2E4XVT6_9PROT2.010e-4650.88Tyr recombinase domain-containing protein n=1 Tax=... [more]
UPI001674002E1.030e-4546.29tyrosine-type recombinase/integrase n=1 Tax=Thalas... [more]
A0A2E2E2F4_9PROT1.160e-4549.70Tyr recombinase domain-containing protein n=1 Tax=... [more]
A0A0Q8BCD1_9HYPH3.030e-4552.76Uncharacterized protein n=1 Tax=Mesorhizobium sp. ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002104Integrase, catalytic domainPFAMPF00589Phage_integrasecoord: 29..168
e-value: 1.3E-10
score: 41.4
IPR002104Integrase, catalytic domainPROSITEPS51898TYR_RECOMBINASEcoord: 1..179
score: 14.240698
IPR013762Integrase-like, catalytic domain superfamilyGENE3D1.10.443.10Intergrase catalytic corecoord: 12..179
e-value: 3.3E-25
score: 90.7
IPR011010DNA breaking-rejoining enzyme, catalytic coreSUPERFAMILY56349DNA breaking-rejoining enzymescoord: 22..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig52007contigP-wetherbeei_contig52007:1..537 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig52007.1.1mRNA_P-wetherbeei_contig52007.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig52007 1..549 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig52007.1.1 ID=prot_P-wetherbeei_contig52007.1.1|Name=mRNA_P-wetherbeei_contig52007.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=179bp
MVSAAGEGGGRLHRSGPNAMHRYQRELLRDYLLFMANSGLRPNEARQLCW
RDLRIEKDAENKPALVVEVAPTTKTGARTVVCREGTQTYLDRLKKLSRHS
APDDLVFCGYDGKPVENFNKTFASILSRLKLLDDRWGKRRTVYSLRHFYC
TQCLLSGIPVHVLAKNMGTSITYIEKHYS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002104Integrase_catalytic
IPR013762Integrase-like_cat_sf
IPR011010DNA_brk_join_enz