mRNA_P-wetherbeei_contig12169.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12169.1.1 vs. uniprot
Match: A0A3B9BJJ5_9PROT (Uncharacterized protein n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3B9BJJ5_9PROT) HSP 1 Score: 193 bits (490), Expect = 2.260e-61 Identity = 85/126 (67.46%), Postives = 96/126 (76.19%), Query Frame = 1
Query: 4 LDRALIHFTLGSQISVGILLLEDGFYVPGMLQAAAAFFDPTSPGRCVSGFCAVHHKLVADIVPPPDADWPQWGFLQWDHYFGWNSGAYLVDLPHMRVRQYHPVSVHRDGRPVQCDLSRTPRILHVV 381
+DRALIHFTLG +ISVGI L + G+Y P +L AA DP SPGRCV+GFCAVH LV D+V PP W WGF +WD YFGWN+G YLVDLP M VRQYHPVS+HR GR V+CDLSRTPR L VV
Sbjct: 1 MDRALIHFTLGREISVGIYLEQMGYYTPDLLHKAAPRLDPASPGRCVAGFCAVHQPLVTDLVAPPPVGWDGWGFEEWDAYFGWNNGTYLVDLPQMAVRQYHPVSIHRRGRTVRCDLSRTPRALRVV 126
BLAST of mRNA_P-wetherbeei_contig12169.1.1 vs. uniprot
Match: A0A352KFG2_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KFG2_9PROT) HSP 1 Score: 135 bits (340), Expect = 4.420e-39 Identity = 56/82 (68.29%), Postives = 62/82 (75.61%), Query Frame = 1
Query: 133 GRCVSGFCAVHHKLVADIVPPPDADWPQWGFLQWDHYFGWNSGAYLVDLPHMRVRQYHPVSVHRDGRPVQCDLSRTPRILHV 378
GRCV+GFC H LV D+V PP W WGF +WD YFGWN+G YLVDLP M VRQYHPVS+HR GR V+CDLSRTPR L V
Sbjct: 8 GRCVAGFCPGHQPLVTDLVAPPPVGWDGWGFEEWDAYFGWNNGTYLVDLPQMAVRQYHPVSIHRRGRTVRCDLSRTPRALRV 89
BLAST of mRNA_P-wetherbeei_contig12169.1.1 vs. uniprot
Match: A0A2D8S042_9HYPH (Uncharacterized protein n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2D8S042_9HYPH) HSP 1 Score: 125 bits (315), Expect = 9.840e-35 Identity = 63/128 (49.22%), Postives = 78/128 (60.94%), Query Frame = 1
Query: 1 MLDRALIHFTLGSQISVGILLLEDGFYVPGMLQAAAAFFDPTSPGRCVSGFCAVHHKLVADIVPPPDADWPQWGFLQWDHYFGWNSGAYLVDLPHMRVRQYHPVSVHRDGRPVQCDLSRTPRILHVVK 384
M D ALIHF LG +IS G+LL ++G P +L AA + DP PGRCV GFCA H LV D+V PP W WGF +WD++FG +G +LVDL ++V QY S V CDLS PR L V+
Sbjct: 1 MRDEALIHFHLGHRISAGLLLPQNGGAAPELLSEAAPWLDPRDPGRCVVGFCAAHPDLVGDVVGPPPDGWRDWGFNEWDNWFGRINGVFLVDLQSLKVTQYPLYSCA--PHIVPCDLSSLPRRLVPVE 126
BLAST of mRNA_P-wetherbeei_contig12169.1.1 vs. uniprot
Match: A0A2D4VGH9_9HYPH (Uncharacterized protein n=2 Tax=Parvibaculum TaxID=256616 RepID=A0A2D4VGH9_9HYPH) HSP 1 Score: 117 bits (292), Expect = 3.410e-31 Identity = 58/128 (45.31%), Postives = 74/128 (57.81%), Query Frame = 1
Query: 1 MLDRALIHFTLGSQISVGILLLEDGFYVPGMLQAAAAFFDPTSPGRCVSGFCAVHHKLVADIVPPPDADWPQWGFLQWDHYFGWNSGAYLVDLPHMRVRQYHPVSVHRDGRPVQCDLSRTPRILHVVK 384
M D +LIHF G +IS G+ L +G P ++ AA + DP PGRCV GFCA H +V D+ P W WGF +WD +FG +G +LVDL +RV QY S G+ V CDLS PR L V+
Sbjct: 1 MRDESLIHFHHGRRISAGLHLPRNGAAAPELIAEAAPWLDPRDPGRCVVGFCAAHPDMVGDVTNAPPPGWENWGFNEWDQWFGRINGVFLVDLETLRVVQYPLYSC--GGQTVPCDLSGLPRRLVPVE 126
BLAST of mRNA_P-wetherbeei_contig12169.1.1 vs. uniprot
Match: A0A081BAE4_9HYPH (Conserved protein n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081BAE4_9HYPH) HSP 1 Score: 111 bits (277), Expect = 5.710e-29 Identity = 55/121 (45.45%), Postives = 67/121 (55.37%), Query Frame = 1
Query: 1 MLDRALIHFTLGSQISVGILLLEDGFYVPGMLQAAAAFFDPTSPGRCVSGFCAVHHKLVADIVPPPDADWPQWGFLQWDHYFGWNSGAYLVDLPHMRVRQYHPVSVHRDGRPVQCDLSRTP 363
M D ALIHF G IS G+ L +G P ++ AA + DP PGRCV GFC+ H V DI P W WGF +WD +FG +G YLVDL ++V+QY S V CDLS P
Sbjct: 1 MRDEALIHFHYGRHISAGVHLAHEGAAAPDLVSEAAPYLDPKHPGRCVVGFCSAHPGAVDDITNAPPRGWENWGFGEWDDWFGRINGVYLVDLRSLKVKQYPLYSCA--PLIVPCDLSGLP 119 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12169.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12169.1.1 >prot_P-wetherbeei_contig12169.1.1 ID=prot_P-wetherbeei_contig12169.1.1|Name=mRNA_P-wetherbeei_contig12169.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=129bp MLDRALIHFTLGSQISVGILLLEDGFYVPGMLQAAAAFFDPTSPGRCVSGback to top mRNA from alignment at P-wetherbeei_contig12169:170..556- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12169.1.1 ID=mRNA_P-wetherbeei_contig12169.1.1|Name=mRNA_P-wetherbeei_contig12169.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=387bp|location=Sequence derived from alignment at P-wetherbeei_contig12169:170..556- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12169:170..556- >mRNA_P-wetherbeei_contig12169.1.1 ID=mRNA_P-wetherbeei_contig12169.1.1|Name=mRNA_P-wetherbeei_contig12169.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=387bp|location=Sequence derived from alignment at P-wetherbeei_contig12169:170..556- (Phaeothamnion wetherbeei SAG_119_79)back to top |