prot_P-wetherbeei_contig10150.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig10150.1.1
Unique Nameprot_P-wetherbeei_contig10150.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length56
Homology
BLAST of mRNA_P-wetherbeei_contig10150.1.1 vs. uniprot
Match: A0A836CH25_9STRA (Transcription factor S-II-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH25_9STRA)

HSP 1 Score: 105 bits (261), Expect = 1.070e-25
Identity = 45/54 (83.33%), Postives = 48/54 (88.89%), Query Frame = 0
Query:    2 INKQCGIKGTEGMFECGRCKSKKTTYFQKQTRSADEPMTTFVTCKNCGKNWKFC 55
            INKQCGI   EGMFECGRCKSKKT Y+QKQTRSADEPMTTFVTC +CGK W+FC
Sbjct:  304 INKQCGITNMEGMFECGRCKSKKTHYYQKQTRSADEPMTTFVTCLHCGKKWRFC 357          
BLAST of mRNA_P-wetherbeei_contig10150.1.1 vs. uniprot
Match: D7FZL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZL7_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 1.290e-25
Identity = 46/54 (85.19%), Postives = 47/54 (87.04%), Query Frame = 0
Query:    2 INKQCGIKGTEGMFECGRCKSKKTTYFQKQTRSADEPMTTFVTCKNCGKNWKFC 55
            INKQCGIK T+GMFECGRCKS KTTY QKQTRSADEPMTTFVTC NC   WKFC
Sbjct:  318 INKQCGIKETDGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRWKFC 371          
BLAST of mRNA_P-wetherbeei_contig10150.1.1 vs. uniprot
Match: A0A7S2XYD9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYD9_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.230e-21
Identity = 40/54 (74.07%), Postives = 44/54 (81.48%), Query Frame = 0
Query:    2 INKQCGIKGTEGMFECGRCKSKKTTYFQKQTRSADEPMTTFVTCKNCGKNWKFC 55
            +N  CGIK  EG+F+C RCKSKKTT+ QKQTRSADEPMT FVTC NCG  WKFC
Sbjct:  278 LNAMCGIKQMEGLFQCFRCKSKKTTHTQKQTRSADEPMTVFVTCLNCGNRWKFC 331          
BLAST of mRNA_P-wetherbeei_contig10150.1.1 vs. uniprot
Match: A0A6H1QU21_9PHYC (Transcription factor S-II n=1 Tax=Ostreococcus mediterraneus virus 2 TaxID=2726183 RepID=A0A6H1QU21_9PHYC)

HSP 1 Score: 85.1 bits (209), Expect = 1.630e-19
Identity = 36/46 (78.26%), Postives = 40/46 (86.96%), Query Frame = 0
Query:    8 IKGTEGMFECGRCKSKKTTYFQKQTRSADEPMTTFVTCKNCGKNWK 53
            IK TEG F CGRCKSKKT+Y+Q QTRSADEPMTTFV+C NC +NWK
Sbjct:  121 IKNTEGFFTCGRCKSKKTSYYQLQTRSADEPMTTFVSCHNCDRNWK 166          
BLAST of mRNA_P-wetherbeei_contig10150.1.1 vs. uniprot
Match: H8ZJJ7_9PHYC (TFIIS-type domain-containing protein n=1 Tax=Ostreococcus tauri virus RT-2011 TaxID=1120767 RepID=H8ZJJ7_9PHYC)

HSP 1 Score: 85.1 bits (209), Expect = 1.790e-19
Identity = 36/46 (78.26%), Postives = 39/46 (84.78%), Query Frame = 0
Query:    8 IKGTEGMFECGRCKSKKTTYFQKQTRSADEPMTTFVTCKNCGKNWK 53
            +K  EG F CGRCKSKKTTY+Q QTRSADEPMTTFVTC NC +NWK
Sbjct:  125 VKNQEGFFTCGRCKSKKTTYYQLQTRSADEPMTTFVTCLNCDRNWK 170          
BLAST of mRNA_P-wetherbeei_contig10150.1.1 vs. uniprot
Match: A0A2E0WJK0_9CHLR (TFIIS-type domain-containing protein n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A2E0WJK0_9CHLR)

HSP 1 Score: 85.1 bits (209), Expect = 2.310e-19
Identity = 36/46 (78.26%), Postives = 40/46 (86.96%), Query Frame = 0
Query:    8 IKGTEGMFECGRCKSKKTTYFQKQTRSADEPMTTFVTCKNCGKNWK 53
            IK  EG F+CGRCKS KTTY+Q QTRSADEPMTTFV+C NCG+NWK
Sbjct:  136 IKNQEGFFKCGRCKSMKTTYYQLQTRSADEPMTTFVSCLNCGRNWK 181          
BLAST of mRNA_P-wetherbeei_contig10150.1.1 vs. uniprot
Match: A0A8K1CMA4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMA4_PYTOL)

HSP 1 Score: 87.0 bits (214), Expect = 3.880e-19
Identity = 37/52 (71.15%), Postives = 42/52 (80.77%), Query Frame = 0
Query:    2 INKQCGIKGTEGMFECGRCKSKKTTYFQKQTRSADEPMTTFVTCKNCGKNWK 53
            INKQCGI+ ++G+F CGRCKS KT+  QKQTRSADEPMT FV C NCG  WK
Sbjct:  259 INKQCGIENSKGLFTCGRCKSSKTSNTQKQTRSADEPMTVFVQCHNCGNRWK 310          
BLAST of mRNA_P-wetherbeei_contig10150.1.1 vs. uniprot
Match: A0A3R7J9J5_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J9J5_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 4.030e-19
Identity = 37/52 (71.15%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    2 INKQCGIKGTEGMFECGRCKSKKTTYFQKQTRSADEPMTTFVTCKNCGKNWK 53
            I KQCG +GT+G+F CGRCKS KT+  QKQTRSADEPMT FV C NCG  WK
Sbjct:  236 IQKQCGTEGTKGLFTCGRCKSSKTSNTQKQTRSADEPMTVFVMCHNCGNRWK 287          
BLAST of mRNA_P-wetherbeei_contig10150.1.1 vs. uniprot
Match: A0A6A5AKX6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AKX6_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 4.360e-19
Identity = 38/52 (73.08%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    2 INKQCGIKGTEGMFECGRCKSKKTTYFQKQTRSADEPMTTFVTCKNCGKNWK 53
            INK CGIK T G+F CGRCKS KT+  Q+QTRSADEPMT FV C NCGK WK
Sbjct:  269 INKACGIKDTRGLFTCGRCKSTKTSNTQQQTRSADEPMTVFVICHNCGKRWK 320          
BLAST of mRNA_P-wetherbeei_contig10150.1.1 vs. uniprot
Match: W4G1Y0_9STRA (Transcription elongation factor S-II n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G1Y0_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 5.590e-19
Identity = 38/52 (73.08%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    2 INKQCGIKGTEGMFECGRCKSKKTTYFQKQTRSADEPMTTFVTCKNCGKNWK 53
            INK CGIK T G+F CGRCKS KT+  Q+QTRSADEPMT FV C NCGK WK
Sbjct:  293 INKACGIKDTRGLFTCGRCKSTKTSNTQQQTRSADEPMTVFVICHNCGKRWK 344          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10150.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CH25_9STRA1.070e-2583.33Transcription factor S-II-domain-containing protei... [more]
D7FZL7_ECTSI1.290e-2585.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2XYD9_9STRA1.230e-2174.07Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6H1QU21_9PHYC1.630e-1978.26Transcription factor S-II n=1 Tax=Ostreococcus med... [more]
H8ZJJ7_9PHYC1.790e-1978.26TFIIS-type domain-containing protein n=1 Tax=Ostre... [more]
A0A2E0WJK0_9CHLR2.310e-1978.26TFIIS-type domain-containing protein n=1 Tax=Dehal... [more]
A0A8K1CMA4_PYTOL3.880e-1971.15Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3R7J9J5_9STRA4.030e-1971.15Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
A0A6A5AKX6_9STRA4.360e-1973.08Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
W4G1Y0_9STRA5.590e-1973.08Transcription elongation factor S-II n=3 Tax=Aphan... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001222Zinc finger, TFIIS-typeSMARTSM00440Cys4_2coord: 15..54
e-value: 3.0E-20
score: 83.3
IPR001222Zinc finger, TFIIS-typePFAMPF01096TFIIS_Ccoord: 15..53
e-value: 2.4E-20
score: 72.1
IPR001222Zinc finger, TFIIS-typePROSITEPS51133ZF_TFIIS_2coord: 13..53
score: 14.427173
NoneNo IPR availableGENE3D2.20.25.10coord: 8..55
e-value: 1.8E-23
score: 83.9
NoneNo IPR availablePANTHERPTHR11477:SF36TRANSCRIPTION ELONGATION FACTOR TFIIScoord: 6..55
NoneNo IPR availablePANTHERPTHR11477TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEINcoord: 6..55
NoneNo IPR availableCDDcd13749Zn-ribbon_TFIIScoord: 9..54
e-value: 2.26833E-19
score: 70.3274
NoneNo IPR availableSUPERFAMILY57783Zinc beta-ribboncoord: 14..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10150contigP-wetherbeei_contig10150:552..1178 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10150.1.1mRNA_P-wetherbeei_contig10150.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig10150 208..1229 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig10150.1.1 ID=prot_P-wetherbeei_contig10150.1.1|Name=mRNA_P-wetherbeei_contig10150.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=56bp
MINKQCGIKGTEGMFECGRCKSKKTTYFQKQTRSADEPMTTFVTCKNCGK
NWKFC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001222Znf_TFIIS