mRNA_P-wetherbeei_contig11980.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11980.1.1 vs. uniprot
Match: A0A7C4XNS3_9HYPH (DsbC domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XNS3_9HYPH) HSP 1 Score: 222 bits (565), Expect = 3.490e-68 Identity = 126/266 (47.37%), Postives = 165/266 (62.03%), Query Frame = 1 Query: 52 AQANTSAGPWVKGFNSSVRLIAGSLPPGDASGKPKLLAGVEMRLADGWKTYWRHPGDDGGLPPSFGWSGSKNLRNAVVRYPAPHRIKGLVGTSLGYTTSVIFPVEIETDNVSKPVELALDFEFGICREICVPAEAKLKLVIPP-TLAVMPPELAASYQKVPQ-PA---PNAGAILKSAKAILTGATPAITLDLAAGAAGGKLDLFAEVVEGAFLPVAQKSGEPAQGIQRFRIDLKGVEEAPQLSGKTLRLTIMGQGAASEVTWAIK 834 A A+ A PW G SS RL+ GS P D S +LLAGVE+RLA+GWKTYWR PGD GG+PP F W+GS NL A V YPAP R+ G S+GY +VIFPVE+ + ++PV L L FE+GICR+ICVPAEA+ ++ I P + + ELA +VP+ PA P A A++ +A+A+LTG+ P +T ++A DLF E +G +LP+A K GE A F IDL E +L G LRLTI+ G E TW ++ Sbjct: 23 AVASGLATPWQHGHGSSARLLVGSSPEADDS--VRLLAGVEVRLAEGWKTYWRQPGDSGGIPPRFDWTGSVNLSGARVLYPAPERLSDPTGESIGYKKNVIFPVELTPADPARPVLLKLAFEYGICRDICVPAEARFEVTIAPGAVTGLQAELARMIARVPRAPASIGPGAPALV-AARAVLTGSAPRLTFEVAVPGGAADADLFVEAADGLYLPMAAKVGEAAPDRALFSIDLSRGVEIDRLRGAALRLTIVAAGGMVETTWKVE 285
BLAST of mRNA_P-wetherbeei_contig11980.1.1 vs. uniprot
Match: A0A1E3VWC3_9HYPH (DsbC domain-containing protein n=2 Tax=Methyloceanibacter superfactus TaxID=1774969 RepID=A0A1E3VWC3_9HYPH) HSP 1 Score: 196 bits (499), Expect = 3.780e-58 Identity = 110/261 (42.15%), Postives = 155/261 (59.39%), Query Frame = 1 Query: 58 ANTSAGPWVKGFNSSVRLIAGSLPPGDASGKPKLLAGVEMRLADGWKTYWRHPGDDGGLPPSFGWSGSKNLRNAVVRYPAPHRIKGLVGTSLGYTTSVIFPVEIETDNVSKPVELALDFEFGICREICVPAEAKLKLVIPPTL----AVMPPELAASYQKVPQPAP-NAGAILKSAKAILTGATPAITLDLAAGAAGGKLDLFAEVVEGAFLPVAQKSGEPAQGIQRFRIDLKGVEEAPQLSGKTLRLTIMGQGAASEVTW 825 A+T PWV NS VRL++G++ GKP + AGV++R+A GWKTYWR+PGD G +PPSF WSGSKNL++A V YPAPHR GT++GY V+FPV+I ++ +PVEL LDFE+G+C+++C+P EA L L +PP L A++ L + +VP+ A +A + A L G PA+ ++ DLF E E F+PV + G A G QRF + EA + GK L LT++ ++ W Sbjct: 38 ASTGQSPWVDQSNSKVRLVSGTIM---TDGKPAIFAGVQLRMAPGWKTYWRNPGDSG-VPPSFDWSGSKNLKSAEVLYPAPHRFADANGTAIGYGDEVVFPVKITPEHDGEPVELKLDFEYGLCKDLCIPNEAALDLALPPDLGKGDAML---LETALARVPRSAQGDALPKITHIAATLGGPAPALEVEATFPPGATGTDLFVESPE-VFVPVPKALGPLADGKQRFAVAFMSATEAAAIKGKALTLTLVSDEGSTATVW 290
BLAST of mRNA_P-wetherbeei_contig11980.1.1 vs. uniprot
Match: UPI0009319D12 (hypothetical protein n=1 Tax=Hyphomicrobium sp. NDB2Meth4 TaxID=1892846 RepID=UPI0009319D12) HSP 1 Score: 194 bits (494), Expect = 1.190e-57 Identity = 99/252 (39.29%), Postives = 149/252 (59.13%), Query Frame = 1 Query: 70 AGPWVKGFNSSVRLIAGSLPPGDASGKPKLLAGVEMRLADGWKTYWRHPGDDGGLPPSFGWSGSKNLRNAVVRYPAPHRIKGLVGTSLGYTTSVIFPVEIETDNVSKPVELALDFEFGICREICVPAEAKLKLVIPPTLAVMPPELAASYQKVPQPAP---NAGAILKSAKAILTGATPAITLDLAAGAAGGKLDLFAEVVEGAFLPVAQKSGEPAQGIQRFRIDLKGVEEAPQLSGKTLRLTIMGQGAASE 816 A PWV G +S VRL+ G+ L G+E+ L +GWKTYWR PG+ GG+PP+F WSGSKNL +A V YPAP R G ++GY +++ PV ++ ++ +KP+E+ L ++G+C++IC+PA+AKL+L +PP MP EL + K+P PA A I+K A L+G P ITLD+ +D F E +G ++P+ +K+ + +G F +DL + P L GK + T++ SE Sbjct: 28 ASPWVDGHSSRVRLVGGAS-----------LVGIEIELPEGWKTYWRTPGEAGGVPPAFDWSGSKNLASAQVLYPAPKRFSDSSGDTVGYKGTIVLPVRLKAEDPAKPIEVQLGIDYGVCKDICIPAQAKLELTLPPGTP-MPEELIDAMTKIPAPAEARREADPIVKKVAAELSGPKPHITLDVELPGGAEHVDAFVEAPDGVYVPLPKKTSDDGKGQVTFEVDLSRDVDIPALKGKEMTATVVSDKGQSE 267
BLAST of mRNA_P-wetherbeei_contig11980.1.1 vs. uniprot
Match: A0A2W4TAF5_9PROT (DsbC domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4TAF5_9PROT) HSP 1 Score: 195 bits (496), Expect = 1.690e-57 Identity = 115/266 (43.23%), Postives = 157/266 (59.02%), Query Frame = 1 Query: 52 AQANTSAGPWVKGFNSSVRLIAGSLPPGDASGK-PKLLAGVEMRLADGWKTYWRHPGDDGGLPPSFGWSGSKNLRNAVVRYPAPHRIKGLVGTSLGYTTSVIFPVEIETDNVSKPVELALDFEFGICREICVPAEAKLKLVIPPTLAVM-PPELAASYQKVPQPAPN----AGAILKSAKAILTGATPAITLDLAAGAAGGKLDLFAEVVEGAFLPVAQKSGEPAQGIQRFRIDLKGVEEAPQLSGKTLRLTIMGQGAASEVTWAI 831 A+A+ A PWV+ + VRL+AGS+ SG+ P +LAG+ + L GWKTYWR PGD GGLPP F WSGS NL A V YPAP R K VG S+GY+ +V+FP+E+ + +KPVEL L+ +GICR+ICVPAEA+L L +P V PE+A++ VP+ P L S++A L G P + L + D+F E +GA++P+ K E I F +DL E +L GKTLR+T++ +E W I Sbjct: 48 ARASPLATPWVEAHGAKVRLVAGSVA--SKSGESPAVLAGLAISLQPGWKTYWRSPGDAGGLPPHFNWSGSVNLSEAKVLYPAPKRFKDSVGDSVGYSGAVVFPIEVRPKDPAKPVELRLNLSYGICRDICVPAEAQLALTLPANATVPGSPEIASALAAVPR-GPGERRPGDPELVSSRAQLEGDRPKLMLQARFPGSAASADMFIEETDGAYVPLPTKVAE-RDDIVSFEVDLSEAEPK-ELRGKTLRITMVSDAGQAEAYWKI 308
BLAST of mRNA_P-wetherbeei_contig11980.1.1 vs. uniprot
Match: A0A3N5N6U3_9HYPH (DsbC domain-containing protein n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A3N5N6U3_9HYPH) HSP 1 Score: 191 bits (486), Expect = 2.930e-56 Identity = 110/266 (41.35%), Postives = 153/266 (57.52%), Query Frame = 1 Query: 49 AAQANTSAGPWVKGFNSSVRLIAGSLPPGDASGKPKLLAGVEMRLADGWKTYWRHPGDDGGLPPSFGWSGSKNLRNAVVRYPAPHRIKGLVGTSLGYTTSVIFPVEIETDNVSKPVELALDFEFGICREICVPAEAKLKLVIPPTL--AVMPPELAASYQKVPQPAP---NAGAILKSAKAILTGATPAITLDLAAGAAGGKLDLFAEVVEGAFLPVAQKSGEPAQGIQRFRIDLKGVEEAPQLSGKTLRLTIMGQGAASEVTWAI 831 AA+ +A PWV+ + VRL+AG+ D +GK LAGVE+ +A GWKTYWR+PG+ G+PP+F WSGS N + V YPAP R+ +GY +SV+FPV + + S+ VEL L EF +CREIC+PA+A + L +PP L P +AA+ +VP+ P + +L A L G P + ++ A DLF E +G FLP+AQK + RF +DL AP+L GK L LT++ ASEV W + Sbjct: 26 AAEPVAAATPWVEAQAARVRLVAGA--DADRAGK-SFLAGVEIVMAQGWKTYWRNPGE-AGVPPNFDWSGSTNTASIKVTYPAPIRLVDPAAEMIGYKSSVLFPVAVSPQDPSQAVELRLALEFAVCREICIPAQASMHLTLPPALLKGAPTPLVAAAQARVPRSPPARRGSDPVLLGVTAKLEGPDPVLQIEAKFPAGSAGADLFVEAPDGIFLPMAQKLPGESDATVRFMVDLSRSGVAPELKGKELTLTLVSDAGASEVAWTL 287
BLAST of mRNA_P-wetherbeei_contig11980.1.1 vs. uniprot
Match: UPI00199413FE (Uncharacterized protein n=1 Tax=Methyloceanibacter sp. TaxID=1965321 RepID=UPI00199413FE) HSP 1 Score: 190 bits (482), Expect = 1.200e-55 Identity = 111/274 (40.51%), Postives = 160/274 (58.39%), Query Frame = 1 Query: 16 AIFAVAPASHVAAQANTSAGPWVKGFNSSVRLIAGSLPPGDASGKPKLLAGVEMRLADGWKTYWRHPGDDGGLPPSFGWSGSKNLRNAVVRYPAPHRIKGLVGTSLGYTTSVIFPVEIETDNVSKPVELALDFEFGICREICVPAEAKLKLVIPPTLAVMPPELAASY-QKVPQPA-PNAGAILKSAKAILTGATPAITLDLA--AGAAGGKLDLFAEVVEGAFLPVAQKSGEPAQGIQRFRIDLKGVEEAPQLSGKTLRLTIMGQGAASEVTW 825 AI VA AS A A SA PW+ NS VRL++G++ D G P LLAGV++R+ GWKTYW++PGD G +PPSF WSGSKNL++A V YPAPHR GT++GY V+FPV++ + +P+EL + F +G+C+++C+P + L L + P L S+ +VP+PA P A + +A L G P + +D GA G DLF + + F+P+ + G A G QRF + E+ + GKTL LT++ ++E W Sbjct: 21 AILGVAAASAALAAA-ASASPWIASTNSKVRLVSGTV---DLDGTPTLLAGVQLRMNSGWKTYWKNPGDSG-VPPSFDWSGSKNLKHAEVLYPAPHRFADANGTAIGYDDEVVFPVKLTPEKEGEPIELKVAFAYGLCKDLCIPNDVSLGLALAPNAGKGDALLLESFLTRVPKPAKPGALPEVSGVEAKLDGEAPQLLVDAVFPPGATGN--DLFVDAGD-VFVPMPRPLGPLADGEQRFAVIFASPSESAAVKGKTLALTLVSDQGSTETKW 286
BLAST of mRNA_P-wetherbeei_contig11980.1.1 vs. uniprot
Match: UPI0019A9D5F8 (Uncharacterized protein n=1 Tax=Methyloceanibacter sp. TaxID=1965321 RepID=UPI0019A9D5F8) HSP 1 Score: 186 bits (473), Expect = 2.330e-54 Identity = 106/272 (38.97%), Postives = 154/272 (56.62%), Query Frame = 1 Query: 40 SHVAAQANTSAGPWVKGFNSSVRLIAGSLPPGDASGKPKLLAGVEMRLADGWKTYWRHPGDDGGLPPSFGWSGSKNLRNAVVRYPAPHRIKGLVGTSLGYTTSVIFPVEIETDNVSKPVELALDFEFGICREICVPAEAKLKLVIPPTLAVMPPELAASY-QKVPQPA-----PNAGAILKSAKAILTGATPAITLDLA--AGAAGGKLDLFAEVVEGA--FLPVAQKSGEPAQGIQRFRIDLKGVEEAPQLSGKTLRLTIMGQGAASEVTW 825 S A A SA PW NS VRL++G++ D G+P LLAG+++RL GWKTYWR+PGD G +PP F W+GSKNL+ A V YPAPHR G+++GY V+FPV++ + +P+EL L F +G+C+++C+P + L L +P + L S+ +VP PA P+ G + + L G TP + +D GA G L +++G F+P+ G P G QRF + EA + GKTLRLT++ ++E W Sbjct: 23 SGAALAAGASASPWTVSTNSKVRLVSGTV---DDGGRPALLAGIQLRLDPGWKTYWRNPGDSG-VPPRFDWAGSKNLKEAEVLYPAPHRFADAGGSAIGYDGEVLFPVKLTPERDGEPIELKLAFAYGLCKDLCIPNDVSLSLAVPANVGKGDALLLDSFVARVPLPARPGLLPSVGGV----QVKLDGETPGLVVDAVFPPGATGTDL-----LIDGGDVFVPLPAPLGAPGDGKQRFAVTFASPSEATAIRGKTLRLTLVSDQGSTETMW 281
BLAST of mRNA_P-wetherbeei_contig11980.1.1 vs. uniprot
Match: A0A101VMM0_9PROT (PLAT domain-containing protein n=1 Tax=Alphaproteobacteria bacterium BRH_c36 TaxID=1734406 RepID=A0A101VMM0_9PROT) HSP 1 Score: 186 bits (472), Expect = 5.780e-54 Identity = 115/271 (42.44%), Postives = 152/271 (56.09%), Query Frame = 1 Query: 52 AQANTSAGPWVKGFNSSVRLIAGSLPPGDASGKPK-LLAGVEMRLADGWKTYWRHPGDDGGLPPSFGWSGSKNLRNAVVRYPAPHRIKGLVGTSLGYTTSVIFPVEIETDNVSKPVELALDFEFGICREICVPAEAKLKLVIPPTLAVMPPELAASYQKVPQPAPNAGAI-------LKSAKAILTGATPAITLDLAAGAAGGKLDLFAEVVEGAFLPVAQK--SGEPAQGIQRFRIDLKGVEEAPQLSGKTLRLTIMGQGAASEVTWAIK 834 A A A WV+G S VR++AG SG P+ ++AGVE+ L WKTYWR PG+ GG+PP F WS SKN+ +A V +PAP R+ G ++GY +V+ PV + + SKPVELALDF FG+CR+IC+PAEA L L +P A PE +K AP A L + +LTG P + LD+ GA K D+FAE G FLP+ ++ A G RF IDL + L GKT+RLT++G SE +K Sbjct: 38 AAAGDLASDWVEGHASRVRMLAGRDSQA-VSGLPEAIIAGVEIDLQPAWKTYWRFPGEAGGVPPEFDWSRSKNVADAKVVFPAPKRLTDATGDTIGYKDNVVLPVIVTPADASKPVELALDFTFGVCRDICIPAEASLLLDVPQLGAQALPE---GIKKALDHAPRKRAQKQPGDPELTGHEIVLTGKAPHVVLDVDFGAKPEKGDVFAEAPGGLFLPMPRRVAGAGTAGGSSRFEIDLSQTLDLDDLKGKTIRLTLVGAEGQSERELVLK 304
BLAST of mRNA_P-wetherbeei_contig11980.1.1 vs. uniprot
Match: A0A3D3AZR9_9HYPH (DsbC domain-containing protein n=3 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3D3AZR9_9HYPH) HSP 1 Score: 185 bits (470), Expect = 8.460e-54 Identity = 101/257 (39.30%), Postives = 151/257 (58.75%), Query Frame = 1 Query: 67 SAGPWVKGFNSSVRLIAGSLPPGDASGKPKLLAGVEMRLADGWKTYWRHPGDDGGLPPSFGWSGSKNLRNAVVRYPAPHRIKGLVGTSLGYTTSVIFPVEIETDNVSKPVELALDFEFGICREICVPAEAKLKLVIPPTLAVMPPELA---ASYQKVPQPA-PNAGAILKSAKAILTGATPAITLDLAAGAAGGKLDLFAEVVEGAFLPVAQKSGEPAQGIQRFRIDLKGVEEAPQLSGKTLRLTIMGQGAASEVTW 825 S PWV NS VRL++G+L D GKP L+AGV++R+ GWKTYW++PGD G +PP+F WSGS NL++A V YPAPHRI GT++GY ++FPV++ + +P+EL L FG+C+++C+P + L L +P A + A ++ +VP+PA P A +++ A + GA P + +D DLF + E ++PV A G QRF + EA + GK+L LT++ G +S+ W Sbjct: 39 STSPWVASTNSKVRLVSGAL---DLDGKPTLVAGVQLRMDGGWKTYWKNPGDSG-VPPTFDWSGSNNLKHAEVLYPAPHRIADANGTAIGYDDEIVFPVKLTPEREGEPIELKLALNFGLCKDLCIPNDVSLALELPADAASHRGDAALLESALARVPKPAAPEALPRVEAVTANVDGAKPELLIDALFPPDATGTDLFIDGGE-TYVPVPMPVRPLAGGKQRFAVAFASPGEAASIKGKSLTLTLVSDGGSSDTAW 290
BLAST of mRNA_P-wetherbeei_contig11980.1.1 vs. uniprot
Match: A0A6I0E7U5_HYPSQ (DsbC domain-containing protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A6I0E7U5_HYPSQ) HSP 1 Score: 183 bits (465), Expect = 2.760e-53 Identity = 102/259 (39.38%), Postives = 142/259 (54.83%), Query Frame = 1 Query: 70 AGPWVKGFNSSVRLIAGSLPPGDASGKPKLLAGVEMRLADGWKTYWRHPGDDGGLPPSFGWSGSKNLRNAVVRYPAPHRIKGLVGTSLGYTTSVIFPVEIETDNVSKPVELALDFEFGICREICVPAEAKLKLVIPPTLAVMPPELAASYQKVPQPAPNA----GAILKSAKAILTGATPAITLDLAAGAAGGKLDLFAEVVEGAFLPVAQKSGEPAQGIQRFRIDLKGVEEAPQLSGKTLRLTIMGQGAASEVTWAIK 834 A WV G S RLI+G +AGVE+ LA+GWKTYWR PG+ GG+ PSF WS S NL NA V YPAP R G ++GY SV+FPV ++ + SKP+++ L F +G+CR+IC+PA+A L L +PP A+ EL + +VP P P A +LK L+G P I L+ +D F E EG ++P+ +K + +G F +DL + L GK L TI+ SE T+ ++ Sbjct: 29 ASEWVDGHGSRARLISGGG-----------IAGVELELAEGWKTYWRFPGEAGGVAPSFDWSKSTNLENAQVLYPAPKRFTDAAGDTIGYKGSVVFPVRLKAKDASKPIDVRLAFGYGVCRDICIPAQALLSLTVPPDTAISE-ELMDAMARVPAP-PEARREGDPLLKRVVPELSGPRPRIVLETEFSGGADHIDAFIEAPEGLYVPLPKKIADDGKGAVTFEVDLSNDVDIAALKGKQLTATIVSDKGQSEATFPLQ 274 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11980.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11980.1.1 >prot_P-wetherbeei_contig11980.1.1 ID=prot_P-wetherbeei_contig11980.1.1|Name=mRNA_P-wetherbeei_contig11980.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=279bp SLAACAIFAVAPASHVAAQANTSAGPWVKGFNSSVRLIAGSLPPGDASGKback to top mRNA from alignment at P-wetherbeei_contig11980:674..1510- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11980.1.1 ID=mRNA_P-wetherbeei_contig11980.1.1|Name=mRNA_P-wetherbeei_contig11980.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=837bp|location=Sequence derived from alignment at P-wetherbeei_contig11980:674..1510- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11980:674..1510- >mRNA_P-wetherbeei_contig11980.1.1 ID=mRNA_P-wetherbeei_contig11980.1.1|Name=mRNA_P-wetherbeei_contig11980.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=837bp|location=Sequence derived from alignment at P-wetherbeei_contig11980:674..1510- (Phaeothamnion wetherbeei SAG_119_79)back to top |