mRNA_P-wetherbeei_contig11870.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11870.1.1 vs. uniprot
Match: A0A836CBL8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBL8_9STRA) HSP 1 Score: 230 bits (586), Expect = 8.850e-63 Identity = 110/199 (55.28%), Postives = 144/199 (72.36%), Query Frame = 3 Query: 3 AALARKGGDLSRTGADRKTCLDLVLSPEGVEELAVGYYKAAEREPLLGPAVRLSHLTYVGFHLEKLVMHTTAELASPFLSIAVFDAAGERIEKPQDVVSPVLTRPNYLWWAANWHMQNPLENLGPGSLAVFELKSHGPGTDEIRTLGWCVHPLHAASLNTQEVSMEMYQAPVDPTMQRLVPADLFLSAEIFLTTSDAAL 599 AALAR+GGDLS +CLDL+ PE +E +AVG+YKAA+ PLL P RL LTY+ FH+EKL M +T L++PFL+++V DAAG+R+EKPQDV +PV++RP YLWW ANWHMQNP+ENLG G + VFELK T E++ LGW + ++ S + EVS+EMY +PVD T++ L PA+LF+S EI LTT L Sbjct: 1368 AALARRGGDLSLKTRAGTSCLDLLQRPEDLEHVAVGFYKAADLNPLLPPPSRLKGLTYLTFHVEKLNMQSTERLSAPFLTVSVHDAAGKRLEKPQDVNAPVVSRPTYLWWGANWHMQNPMENLGQGCMVVFELKDQSTVTGEVKNLGWAAYHINTNSATSHEVSLEMYASPVDLTLRTLKPAELFMSGEIMLTTGSGLL 1566
BLAST of mRNA_P-wetherbeei_contig11870.1.1 vs. uniprot
Match: D7G3L5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3L5_ECTSI) HSP 1 Score: 198 bits (504), Expect = 6.590e-52 Identity = 97/195 (49.74%), Postives = 140/195 (71.79%), Query Frame = 3 Query: 63 LDLVLSPEGVEELAVGYYKAAEREPLLGPAVRLSHLTYVGFHLEKLVMHTTAELASPFLSIAVFDAAGERIEKPQDVVSPVLTRPNYLWWAANWHMQNPLENLGPGSLAVFELKSHGP-----------GTDEIRTLGWCVHPLHAASLNTQEVSMEMYQAPVDPTMQRLVPADLFLSAEIFLTTSDAALAAAAA 614 L+LV + VE++AVG++KAAER P+L P V+LS LTY+ FHLE+LVMH+TA+L SPF++++V D+ G R+E QD +PV+ RP+YLWW+ ++HMQNP+ENL PG+ VF +K G+ ++R LGW + ++ +++++QEVSMEMYQAPVD + + LVP DLFLS + LTT+ + AAAA Sbjct: 1650 LELVNRDQDVEDIAVGHFKAAERSPMLAPPVKLSSLTYLSFHLERLVMHSTADLQSPFITVSVHDSRGRRVEAAQDASAPVVRRPSYLWWSTSYHMQNPVENLEPGTRLVFTVKDQSTEVVSTGRRGVAGSGDVRELGWGMIHVNKSTMSSQEVSMEMYQAPVDLSQKALVPIDLFLSGYVTLTTAQVDMDAAAA 1844
BLAST of mRNA_P-wetherbeei_contig11870.1.1 vs. uniprot
Match: A0A835ZQ73_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ73_9STRA) HSP 1 Score: 161 bits (407), Expect = 3.690e-39 Identity = 88/194 (45.36%), Postives = 116/194 (59.79%), Query Frame = 3 Query: 3 AALARKGGDLSRTG-ADRKTCLDLVLSPEGVEELAVGYYKAAEREPLLGPAVRLSHLTYVGFHLEKLVMHTTAELASPFLSIAVFDAAGERIEKPQDVVSPVLTRPNYLWWAANWHMQNPLENLGPGSLAVFELKSHGPGTDEIRTLGWCVHPLHAASLNTQEVSMEMYQAPVDPTMQRLVPADLFLSAEIFLT 581 A LA KGGDLS AD K+ +D+V + L ++ ER PLL P +L TY+ LE+ M +T L SPFLS++V++ G+ E QDVV P LTRP YLWWA WHMQNPLE LG GS+ V EL+ G RT+ W V+ L LNT+ ++ MY APVD +++RL A++ + E FLT Sbjct: 1591 AVLAWKGGDLSLARPADGKSVVDIVKGERELALLMQKHFHPTERAPLLAPPEKLFGFTYLSLLLERTTMASTDALVSPFLSVSVYNGKGQLSEAQQDVVFPCLTRPGYLWWAQTWHMQNPLETLGAGSVIVVELRDQGEAK-RARTVSWGVYALDLDDLNTRAETLNMYAAPVDLSLKRLELAEVIIQGEAFLT 1783
BLAST of mRNA_P-wetherbeei_contig11870.1.1 vs. uniprot
Match: W7TRG2_9STRA (Myosin-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRG2_9STRA) HSP 1 Score: 115 bits (288), Expect = 9.490e-24 Identity = 67/199 (33.67%), Postives = 108/199 (54.27%), Query Frame = 3 Query: 3 AALARKGGDLSRTGADRKTCLDLVLSP--EGVEELAVGYYKAAEREPLLGPAVRLSHLTYVGFHLEKLVMHTTAE--LASPFLSIAVFDAAGERIEKPQDVVSPVLTRPNYLWWAANWHMQNPLENLGPGSLAVFEL--KSHGPGTDEIRTLGWCVHPLHAASLNTQEVSMEMYQAPVDPTMQRLVPADLFLSAEIFLT 581 AALA+KG +L+ +T +DL+ EG + + G K + L P RL +YV F +EKL M T++ +P++ I+VF A +E+ Q + P L + +WW W+MQ P+E+L PGS AV EL ++ GP W + + +++ ++EMY+ P+D +QRL PAD FL+ ++ +T Sbjct: 1804 AALAQKGANLTLRNKSNQTVVDLMAESRQEGTKLMGPGQVKMSADRTLFPPPFRLPACSYVSFFVEKLAMAETSQEKFPAPYIKISVFSAKQHLVERAQIITYPALVKGRSMWWGWTWNMQTPVEHLSPGSFAVLELIDRTRGPQA-------WALLHVTDTHVDSGLQTLEMYRYPLDLRLQRLEPADFFLTGDMRVT 1995
BLAST of mRNA_P-wetherbeei_contig11870.1.1 vs. uniprot
Match: D7G6I1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6I1_ECTSI) HSP 1 Score: 105 bits (263), Expect = 1.420e-20 Identity = 53/123 (43.09%), Postives = 70/123 (56.91%), Query Frame = 3 Query: 156 RLSHLTYVGFHLEKLVMHTTAELASPFLSIAVFDAAGERIEKPQDVVSPVLTRPNYLWWAANWHMQNPLENLGPGSLAVFELKSHGPGTDEIRTLGWCVHPLHAASLNTQEVSMEMYQAPVDP 524 +L TY+ LE LV+ + A++ P L+++VF A G+ +E Q+ SP L YLWW WHMQ PLE LGPGS VFEL+ G+ + + W PL LNTQ + Y APVDP Sbjct: 1771 KLLGFTYISVFLETLVVASAADIGKPTLTVSVFSAKGKLVESAQEFDSPTLFSSMYLWWGRTWHMQTPLETLGPGSSMVFELRDIQGGSK--KAICWGALPLDPDHLNTQPEKLSTYLAPVDP 1891
BLAST of mRNA_P-wetherbeei_contig11870.1.1 vs. uniprot
Match: A0A6H5L704_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L704_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 1.720e-17 Identity = 48/119 (40.34%), Postives = 70/119 (58.82%), Query Frame = 3 Query: 234 FLSIAVFDAAGERIEKPQDVVSPVLTRPNYLWWAANWHMQNPLENLGPGSLAVFELKSHGPGTDEIRTLGWCVHPLHAASLNTQEVSMEMYQAPVDPTMQRLVPADLFLSAEIFLTTSD 590 F+ ++V++A G+ E QDV P++T P YLWWA WHMQ PLE LG GS FELK G + RTL W + L+ +N++ S+ Y A V P + RL P++ L + +T ++ Sbjct: 511 FVRVSVYNAKGKLSEAQQDVTVPIMTNPEYLWWAHTWHMQTPLETLGAGSFVAFELKEKGEHKE--RTLSWGAYHLNPDEVNSRPESLCAY-AGVPPALVRLEPSEFSLVGDAIITKAN 626
BLAST of mRNA_P-wetherbeei_contig11870.1.1 vs. uniprot
Match: D7G6I0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6I0_ECTSI) HSP 1 Score: 77.0 bits (188), Expect = 3.180e-11 Identity = 34/70 (48.57%), Postives = 45/70 (64.29%), Query Frame = 3 Query: 234 FLSIAVFDAAGERIEKPQDVVSPVLTRPNYLWWAANWHMQNPLENLGPGSLAVFELKSH-GPGTDEIRTL 440 F+ ++V++A G+ E QDV P++T P YLWWA WHMQ PLE LG GS FELK G GT ++ + Sbjct: 1782 FVRVSVYNAKGKLSEAQQDVTVPIMTNPEYLWWAHTWHMQTPLETLGAGSFVAFELKEKVGMGTRWVKMI 1851 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11870.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11870.1.1 >prot_P-wetherbeei_contig11870.1.1 ID=prot_P-wetherbeei_contig11870.1.1|Name=mRNA_P-wetherbeei_contig11870.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=143bp MHTTAELASPFLSIAVFDAAGERIEKPQDVVSPVLTRPNYLWWAANWHMQback to top mRNA from alignment at P-wetherbeei_contig11870:172..1758- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11870.1.1 ID=mRNA_P-wetherbeei_contig11870.1.1|Name=mRNA_P-wetherbeei_contig11870.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1587bp|location=Sequence derived from alignment at P-wetherbeei_contig11870:172..1758- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11870:172..1758- >mRNA_P-wetherbeei_contig11870.1.1 ID=mRNA_P-wetherbeei_contig11870.1.1|Name=mRNA_P-wetherbeei_contig11870.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=429bp|location=Sequence derived from alignment at P-wetherbeei_contig11870:172..1758- (Phaeothamnion wetherbeei SAG_119_79)back to top |