mRNA_P-wetherbeei_contig11617.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11617.2.1
Unique NamemRNA_P-wetherbeei_contig11617.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: A0A6H5KUC8_9PHAE (DNA-(apurinic or apyrimidinic site) endonuclease 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUC8_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 2.620e-32
Identity = 139/448 (31.03%), Postives = 175/448 (39.06%), Query Frame = 1
Query:    1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGLRG-AVTDSDVWPGTQGSDHCPVHAEFDLSR---LPDGGGGSSAAGRALEGAAVGPDAIHPPECSCFYPEYSGKQVKIRTFFARSG----AAAANGGDGATTXXXXXXXXSVEKSCSDXXXXXAEGSAGPRAAASKSTTASLFDAFASSVRMPAAGGGWGAKCGACKSGRKAAGKRAAMGKGGKPAPDKQMKLTAFMAAPGDGGGK----AEGNYSKENLPVKAYAAEAEPRTEPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELTAAXXXXTAGAXXXXXXXXXXXXXXXXXXXXXXXXXXARGGSSGSNCALRGGSAPMDRLQSAPTAARGWQALM-QPAATPLCDHREETVERVVKKAGPNQGRHFFVCKRSAGNWPQDRNARCDFFQWSTKGVQGFK 1305
            P R+ A+TCW T+TGARDNNYG+RIDYI+        A+   D+ P   GSDHCPV A F       L     G S         +      HPPECSCFYPE + KQ K+  +F   G    +A    G GA            ++   D     A G   P A   +   A +         +P  G G   K GA  +G      +     G                 PG GG +    A G  + +N+   A AA    R  P+                                        R    A       A  XXXXX             XXXXX   G   G N A  GGS           +A  W+A+  +  + P C+H E +++R V K GPN  R F+ C RSAGNWP DRNARC FFQW   GV+G+K
Sbjct:  274 PDRKGAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRACDIMPDFLGSDHCPVRARFAFPLAVGLAADAPGKSEGDEIARSRSESELPEHPPECSCFYPELTAKQEKLAKYFVAGGQNEESAVGTEGKGA-----------YDRLIGDRNGAGASGVTRPAAGGRRGVVAFMR-------ALP--GTGVTGKDGAGVAGSLMMRAKKVGSAGRTSXXXXXXXXXXXXXRPGSGGSRQSKLAFGPVANDNVSTSAGAAS---REAPAGGRGEVSGTRRRAEGAVPLRTGNERAGGGGAQTSQAIQPPRSTVHASGGGHDTAGAXXXXXSVSTIGSSRISKPXXXXXVDTGSGEGPNGA--GGSRD---------SAEAWKAIFGRKKSAPTCEHGEPSIQRTVLKPGPNHNRRFYTCARSAGNWPTDRNARCTFFQWRRDGVRGYK 687          
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: D7FKG3_ECTSI (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG3_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 1.570e-31
Identity = 137/452 (30.31%), Postives = 177/452 (39.16%), Query Frame = 1
Query:    1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGLRG-AVTDSDVWPGTQGSDHCPVHAEFDL---SRLPDGGGGSSAAGRALEGAAVGPDAIHPPECSCFYPEYSGKQVKIRTFFARSG----AAAANGGDGATTXXXXXXXXSVEKSCSDXXXXXAEGSAG-PRAAASKSTTASLFDAFASSVRMPAAGGGWGAKCGACKSGRKAAGKRAAMGKGGKPAPDKQMKLTAFMAAPGDGGGK----AEGNYSKENLPVKAYAAEAEPRTEPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---RELTAAXXXXTAGAXXXXXXXXXXXXXXXXXXXXXXXXXXARGGSSGSNCALRGGSAPMDRLQSAPTAARGWQALM-QPAATPLCDHREETVERVVKKAGPNQGRHFFVCKRSAGNWPQDRNARCDFFQWSTKGVQGFK 1305
            P R+ A+TCW T+TGARDNNYG+RIDYI+        A+   D+ P   GSDHCPV A F     + L     G S         +      HPPECSCFYPE + KQ K+  +F   G    +A    G GA          + E   +       +G A   RA      T     + A S+ M       G K G+             +G+    +      LTA    PG GG +    A G  +  N+   A A   E     +                       XXXXXXXX            R   +     TAGA                            G  +G      GG    D       +A  W+A+  +  + P C+H E +++R V K GPN  R F+ C RSAGNWP DRNARC FFQW   GV+G+K
Sbjct:  261 PDRKSAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRACDIMPDFLGSDHCPVRARFAFPLAAGLAADAPGESEGDEIARSRSASEWPEHPPECSCFYPELTAKQEKLAKYFVAGGQNEESAVGTEGKGADGRLVRDGNGARESGATRPAAGGGKGVAAFMRALPGAGVTGKDGASVAGSLMMR------GKKVGS-------------VGRTSSTSSSGGGSLTARR--PGSGGSRQSKLAFGPAANGNVSTSAGATSREATAGGNGAGSGTSRRAEGTVPLRTCNQRGXXXXXXXXAQTSQAIQPPRSRVHASGGGHDTAGAGGGSGSVSTIGSCRLSNPGGEG------GVETGPGEGPNGGGGSRD-------SAEAWKAIFGRKKSAPTCEHGEPSIQRTVLKPGPNHNRRFYTCARSAGNWPTDRNARCTFFQWRRDGVRGYK 678          
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: A0A1S3K520_LINUN (DNA-(apurinic or apyrimidinic site) endonuclease n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3K520_LINUN)

HSP 1 Score: 99.0 bits (245), Expect = 1.370e-18
Identity = 50/115 (43.48%), Postives = 64/115 (55.65%), Query Frame = 1
Query:    1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGL-RGAVTDSDVWPGTQGSDHCPVHAEFDLSRLPDGGGGSSAAGRALEGAAVGPDAIHPPECSCFYPEYSGKQVKIRTFFARS 342
            P+  +A+TCW T TGAR  NYG+RIDYIL S  L  G V D  +WP  +GSDHCPV AE   +                    +   A +PP C+ F PE+SGKQ K+  FF++S
Sbjct:  253 PNEENAFTCWNTSTGARQTNYGTRIDYILASADLCEGLVKDCVIWPDIEGSDHCPVKAELTCN--------------------IVQSAKYPPICTKFMPEFSGKQQKLSEFFSKS 347          
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: A0A835ZDF2_9STRA (DNA-(apurinic or apyrimidinic site) endonuclease 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDF2_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 5.350e-18
Identity = 178/454 (39.21%), Postives = 211/454 (46.48%), Query Frame = 1
Query:    1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGL-RGAVTDSDVWPGTQGSDHCPVHAEFDLSRLPDGGGGSSAAGRALEGAAVGPDAIHPPECSCFYPEYSGKQVKIRTFFARSGAAAANGGDGATTXXXXXXXXSVEKSCSDXXXXXAEGSAGPRAAASKSTTAS---LFDAFASSVR------------MPAAGGGWGAKCGACKSGRKAAGKRAAMG--KGGKPAPDKQMKLTAFMAAPGDGGGKAEGNYSKENLPVKAYAAEAEPRTEPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELTAAXXXXTAGAXXXXXXXXXXXXXXXXXXXXXXXXXXARGGSSGSNCALRGGSAPMDRLQSAPTAARGWQALMQPAATPLCD-HREETVERVVKKAGPNQGRHFFVCKRSAGNWPQDRNARCDFFQWSTKGVQGFK 1305
            P    A+TCW TK GAR NNYG+RIDY+L S    R A+  S +WP   GSDHCPV A FD             A RA   AA  P   HPP+CSCF    +    K+  FFA +   +         XXXXXXX +   S S       E       AA + +T S   LFD  A+               +P AG    A   +  SG  A G   A G                                     + +KA+ A A PR                        XXXXXXXXXXXXXXXXXXXX      XXXX    XXXXXXXXXXXXXXXXXXXXXXXXX  RG       A R GS+ +D       A   WQAL+     P+C  HRE  VER V KAGPNQGR F+ C R  G+WP+D NARC++F++   G +G++
Sbjct:  289 PAAERAFTCWNTKKGARANNYGTRIDYVLASAAFARAALRASAIWPHVVGSDHCPVVATFD-------------APRAHAAAAAAP---HPPQCSCFLAAVA--VPKLTAFFAPTRVRSGX------XXXXXXXXDNASDSASQPPELACE-------AAEEDSTLSCEALFDVPAARFVQEPQDPILPPPCIPRAGATAVAPFFSGSSGGGANGVPRAQGFTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRGMTQMTLKAFGAAA-PRXX----------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRGSD-----ASRAGSSGVD-------AKSAWQALLAKRPPPVCSGHREPAVERTVLKAGPNQGRRFYCCARGEGDWPKDPNARCNYFEFRESGARGYR 676          
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: A0A0C2XZL0_9AGAM (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C2XZL0_9AGAM)

HSP 1 Score: 94.7 bits (234), Expect = 4.320e-17
Identity = 55/123 (44.72%), Postives = 70/123 (56.91%), Query Frame = 1
Query:    1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGLRGAVTDSDVWPGTQGSDHCPVHAEFDLSRLPDGGGGSSAAGRALEGAAVGPDAIH--PPECSCFYPEYSGKQVKIRTFFA-RSGAAAAN 360
            P R   YTCW TKT ARD NYG+RID ILI+ GLR  V D+D+ P  +GSDHCPV  +F  + + DG G       A+ G+  G       P  C+  + EYS KQ  + TFF  R+ +  AN
Sbjct:  204 PTREGMYTCWNTKTSARDGNYGTRIDLILITPGLRRWVKDADIQPLVKGSDHCPVFLDFHDTII-DGEGRELKLSDAIRGSTTGSMGTRELPRICARNWDEYSAKQTLLSTFFTPRTASTLAN 325          
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: A0A067D204_SAPPC (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D204_SAPPC)

HSP 1 Score: 92.0 bits (227), Expect = 1.490e-16
Identity = 48/114 (42.11%), Postives = 61/114 (53.51%), Query Frame = 1
Query:    1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGLRGAVTDSDVWPGTQGSDHCPVHAEFDLSRLPDGGGGSSAAGRALEGAAVGPDAIHPPECSCFYPEYSGKQVKIRTFFARS 342
            P R  AYTCW+  TGAR+ NYG R+DYIL+   L  A+T  DVW   +GSDHCPV A   L+  P                 + P  +  P C+ FYPE++GKQ  I+ F   S
Sbjct:  193 PMREKAYTCWRALTGARETNYGVRLDYILLDSRLGSALTSCDVWQEKEGSDHCPVLATLSLA-FP-------------ASHVIAPTTV--PSCAKFYPEFAGKQTSIQRFLRGS 290          
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: A0A369J694_HYPMA (DNA-(Apurinic or apyrimidinic site) lyase 2 n=1 Tax=Hypsizygus marmoreus TaxID=39966 RepID=A0A369J694_HYPMA)

HSP 1 Score: 92.4 bits (228), Expect = 2.220e-16
Identity = 53/120 (44.17%), Postives = 70/120 (58.33%), Query Frame = 1
Query:    1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGLRGAVTDSDVWPGTQGSDHCPVHAEFDLSRLPDGGGGSSAAGRALEGAAV-GPDAIHPPECSC-FYPEYSGKQVKIRTFFARSGAAA 354
            P R+  YTCW TK  ARD+NYG+RIDYILI+ GL   V  +D+ P  +GSDHCPV+   DL        G+    R + G    G ++  PP  +  F+ EYSGKQ+ +  FF R+G  A
Sbjct:  266 PDRKGMYTCWNTKISARDSNYGTRIDYILITRGLLPWVKGADIQPQIKGSDHCPVY--LDLQESITNNDGTVVHLRDVLGLKQDGDNSSEPPRLAAKFWDEYSGKQMLLEKFFGRTGDLA 383          
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: A0A8H3E5K0_9AGAM (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3E5K0_9AGAM)

HSP 1 Score: 89.7 bits (221), Expect = 1.530e-15
Identity = 49/122 (40.16%), Postives = 68/122 (55.74%), Query Frame = 1
Query:    1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGLRGAVTDSDVWPGTQGSDHCPVHAEF---------DLSRLPDGGGGSSAAGRALEGAAVGPDAIHPPECSCFYPEYSGKQVKIRTFFAR 339
            P R   +TCW T+  AR++NYG+RIDYIL++ GL       D+ P  +GSDHCPV  +F          +SRL D  GGS  +G+  +          PP  + F+ E+SGKQ  + TFFA+
Sbjct:  248 PDREKMFTCWDTRINARESNYGTRIDYILVTKGLLPWFKHGDIQPDIRGSDHCPVFIDFHDEITSPDGQVSRLVDVLGGSDTSGQRRD---------PPPISTKFWSEFSGKQKLLSTFFAK 360          
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: A0A0H2R7U9_9AGAM (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Schizopora paradoxa TaxID=27342 RepID=A0A0H2R7U9_9AGAM)

HSP 1 Score: 88.2 bits (217), Expect = 5.620e-15
Identity = 48/115 (41.74%), Postives = 66/115 (57.39%), Query Frame = 1
Query:    1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGLRGAVTDSDVWPGTQGSDHCPVHAEFDLSRLPDGGGGSSAAGRAL-EGAAVGPDAIHPPE-CSCFYPEYSGKQVKIRTFFAR 339
            P R+  YTCW TK  AR+ NYG+RIDYIL+S GL       D+ P  +GSDHCPV+ +     L D   G +   R L +   +  +   PP  C+ F+PE+SGKQ  + +FF +
Sbjct:  278 PDRKGMYTCWNTKISARETNYGTRIDYILLSRGLLPWFKHGDIMPSVRGSDHCPVYID-----LHDEIAGENGEVRKLRDEMQMSSERREPPRLCAKFWPEFSGKQQLLSSFFGK 387          
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: A0A8J7NU70_ATRSP (DNA-(apurinic or apyrimidinic site) endonuclease (Fragment) n=1 Tax=Atractosteus spatula TaxID=7917 RepID=A0A8J7NU70_ATRSP)

HSP 1 Score: 87.4 bits (215), Expect = 6.040e-15
Identity = 50/124 (40.32%), Postives = 60/124 (48.39%), Query Frame = 1
Query:    1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGLRGA-VTDSDVWPGTQGSDHCPVHAEFDLSRLPDGGGGSSAAGRALEGAAVGPDAIHPPECSCFYPEYSGKQVKIRTFFARSGAAAANGGD 369
            P R  A+TCW T TGAR  NYG+RIDYIL S GL  A   DSD+ P  +GSDHCPV      + L                         PP C+   PE+ G+Q K+  F  + G AAA   D
Sbjct:  115 PARSHAFTCWSTVTGARQTNYGTRIDYILASRGLAEAEFLDSDILPEVEGSDHCPVRGHLRCALLSS--------------------PRCPPLCTRHMPEFMGRQQKLSRFLVKVGQAAATAAD 218          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUC8_9PHAE2.620e-3231.03DNA-(apurinic or apyrimidinic site) endonuclease 2... [more]
D7FKG3_ECTSI1.570e-3130.31DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A1S3K520_LINUN1.370e-1843.48DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A835ZDF2_9STRA5.350e-1839.21DNA-(apurinic or apyrimidinic site) endonuclease 2... [more]
A0A0C2XZL0_9AGAM4.320e-1744.72DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A067D204_SAPPC1.490e-1642.11DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A369J694_HYPMA2.220e-1644.17DNA-(Apurinic or apyrimidinic site) lyase 2 n=1 Ta... [more]
A0A8H3E5K0_9AGAM1.530e-1540.16DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A0H2R7U9_9AGAM5.620e-1541.74DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A8J7NU70_ATRSP6.040e-1540.32DNA-(apurinic or apyrimidinic site) endonuclease (... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11617contigP-wetherbeei_contig11617:1..1305 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FKG3
Preferred nameAPEX2
PFAMsExo_endo_phos,zf-GRF
Model size1305
Max annot lvl2759|Eukaryota
KEGG koko:K02836,ko:K10772
KEGG Pathwayko03410,map03410
KEGG ModuleM00296
Hectar predicted targeting categoryother localisation
GOsGO:0000302,GO:0001650,GO:0003674,GO:0003824,GO:0003906,GO:0004518,GO:0004527,GO:0004528,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0008081,GO:0008150,GO:0008152,GO:0008296,GO:0008309,GO:0008311,GO:0008408,GO:0009987,GO:0016020,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0019866,GO:0031090,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0033554,GO:0034599,GO:0034614,GO:0034641,GO:0042221,GO:0042578,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051336,GO:0051345,GO:0051716,GO:0065007,GO:0065009,GO:0070013,GO:0070887,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901700,GO:1901701,GO:1902544,GO:1902546
Exons1
Evalue2.57e-32
EggNOG OGsCOG0708@1|root,KOG1294@2759|Eukaryota
EC4.2.99.18
Descriptiondouble-stranded DNA 3'-5' exodeoxyribonuclease activity
Cds size1305
COG categoryL
BRITEko00000,ko00001,ko00002,ko01000,ko03012,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185919.1165996-CDS-P-wetherbeei_contig11617:0..13051683185919.1165996-CDS-P-wetherbeei_contig11617:0..1305Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11617 1..1305 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11617.2.1prot_P-wetherbeei_contig11617.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11617 1..1305 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11617.2.1

>prot_P-wetherbeei_contig11617.2.1 ID=prot_P-wetherbeei_contig11617.2.1|Name=mRNA_P-wetherbeei_contig11617.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=435bp
PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGLRGAVTDSDVWPGTQGS
DHCPVHAEFDLSRLPDGGGGSSAAGRALEGAAVGPDAIHPPECSCFYPEY
SGKQVKIRTFFARSGAAAANGGDGATTGASAGAAASVEKSCSDGGGTSAE
GSAGPRAAASKSTTASLFDAFASSVRMPAAGGGWGAKCGACKSGRKAAGK
RAAMGKGGKPAPDKQMKLTAFMAAPGDGGGKAEGNYSKENLPVKAYAAEA
EPRTEPSSSGAGASAGAALQASCQNAASESAGAASASEPAEAEAARAREL
TAAAAPATAGAAAAAPATAGAAAAAAAAAVRAAAAGTARGGSSGSNCALR
GGSAPMDRLQSAPTAARGWQALMQPAATPLCDHREETVERVVKKAGPNQG
RHFFVCKRSAGNWPQDRNARCDFFQWSTKGVQGFK
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mRNA from alignment at P-wetherbeei_contig11617:1..1305+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11617.2.1 ID=mRNA_P-wetherbeei_contig11617.2.1|Name=mRNA_P-wetherbeei_contig11617.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1305bp|location=Sequence derived from alignment at P-wetherbeei_contig11617:1..1305+ (Phaeothamnion wetherbeei SAG_119_79)
CCGCACCGCCGCGACGCCTATACGTGCTGGCAAACGAAAACTGGTGCGCG GGACAACAACTACGGCTCGCGCATCGACTACATACTCATCAGCGGCGGCC TCCGCGGCGCCGTCACGGACAGCGACGTCTGGCCGGGCACGCAGGGCAGC GACCACTGCCCCGTGCACGCCGAGTTTGACCTCTCACGGTTGCCGGATGG CGGCGGCGGAAGCAGCGCGGCCGGCAGAGCTCTGGAAGGCGCGGCGGTGG GTCCGGATGCCATCCACCCTCCCGAATGCTCGTGCTTCTACCCGGAGTAT AGCGGCAAGCAGGTCAAGATCAGAACCTTTTTCGCTCGCTCTGGAGCGGC CGCGGCCAATGGCGGCGACGGCGCCACCACTGGCGCTAGCGCTGGCGCCG CCGCATCGGTTGAAAAGAGCTGTTCAGATGGTGGGGGCACCAGCGCCGAG GGCAGTGCGGGACCGCGGGCGGCTGCCTCCAAGAGCACGACGGCATCGTT GTTCGACGCATTCGCATCATCGGTCCGCATGCCGGCAGCAGGCGGCGGCT GGGGCGCCAAGTGCGGAGCATGCAAGAGTGGCAGGAAGGCTGCGGGGAAG CGAGCGGCCATGGGCAAGGGCGGCAAGCCGGCTCCGGACAAGCAGATGAA GCTGACGGCGTTCATGGCGGCGCCAGGCGACGGCGGCGGGAAGGCGGAGG GCAACTACAGCAAGGAGAATCTTCCCGTCAAAGCCTACGCGGCAGAGGCG GAGCCGCGGACGGAACCCTCGTCATCGGGCGCCGGCGCCTCTGCCGGAGC GGCACTGCAGGCGTCGTGCCAGAACGCAGCGTCCGAATCCGCTGGAGCTG CTTCCGCCTCGGAGCCGGCTGAGGCCGAGGCGGCGCGGGCGCGCGAGCTG ACCGCCGCCGCGGCTCCTGCAACCGCGGGTGCCGCCGCCGCGGCTCCTGC AACCGCGGGTGCCGCCGCCGCCGCCGCTGCTGCCGCAGTCCGTGCAGCTG CCGCTGGGACGGCCCGGGGCGGCAGCAGCGGCAGCAACTGTGCGCTGCGC GGCGGCTCCGCTCCCATGGACAGGCTGCAGTCGGCGCCGACGGCGGCGCG GGGCTGGCAGGCGCTGATGCAACCGGCGGCAACGCCGCTGTGCGACCACC GGGAGGAGACGGTGGAGCGGGTGGTCAAGAAGGCCGGGCCGAACCAGGGC AGGCACTTCTTCGTCTGCAAGCGGTCGGCGGGCAACTGGCCCCAGGACCG CAACGCGCGCTGCGACTTCTTTCAGTGGAGCACGAAGGGCGTGCAGGGCT TCAAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11617:1..1305+

>mRNA_P-wetherbeei_contig11617.2.1 ID=mRNA_P-wetherbeei_contig11617.2.1|Name=mRNA_P-wetherbeei_contig11617.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1305bp|location=Sequence derived from alignment at P-wetherbeei_contig11617:1..1305+ (Phaeothamnion wetherbeei SAG_119_79)
CCGCACCGCCGCGACGCCTATACGTGCTGGCAAACGAAAACTGGTGCGCG
GGACAACAACTACGGCTCGCGCATCGACTACATACTCATCAGCGGCGGCC
TCCGCGGCGCCGTCACGGACAGCGACGTCTGGCCGGGCACGCAGGGCAGC
GACCACTGCCCCGTGCACGCCGAGTTTGACCTCTCACGGTTGCCGGATGG
CGGCGGCGGAAGCAGCGCGGCCGGCAGAGCTCTGGAAGGCGCGGCGGTGG
GTCCGGATGCCATCCACCCTCCCGAATGCTCGTGCTTCTACCCGGAGTAT
AGCGGCAAGCAGGTCAAGATCAGAACCTTTTTCGCTCGCTCTGGAGCGGC
CGCGGCCAATGGCGGCGACGGCGCCACCACTGGCGCTAGCGCTGGCGCCG
CCGCATCGGTTGAAAAGAGCTGTTCAGATGGTGGGGGCACCAGCGCCGAG
GGCAGTGCGGGACCGCGGGCGGCTGCCTCCAAGAGCACGACGGCATCGTT
GTTCGACGCATTCGCATCATCGGTCCGCATGCCGGCAGCAGGCGGCGGCT
GGGGCGCCAAGTGCGGAGCATGCAAGAGTGGCAGGAAGGCTGCGGGGAAG
CGAGCGGCCATGGGCAAGGGCGGCAAGCCGGCTCCGGACAAGCAGATGAA
GCTGACGGCGTTCATGGCGGCGCCAGGCGACGGCGGCGGGAAGGCGGAGG
GCAACTACAGCAAGGAGAATCTTCCCGTCAAAGCCTACGCGGCAGAGGCG
GAGCCGCGGACGGAACCCTCGTCATCGGGCGCCGGCGCCTCTGCCGGAGC
GGCACTGCAGGCGTCGTGCCAGAACGCAGCGTCCGAATCCGCTGGAGCTG
CTTCCGCCTCGGAGCCGGCTGAGGCCGAGGCGGCGCGGGCGCGCGAGCTG
ACCGCCGCCGCGGCTCCTGCAACCGCGGGTGCCGCCGCCGCGGCTCCTGC
AACCGCGGGTGCCGCCGCCGCCGCCGCTGCTGCCGCAGTCCGTGCAGCTG
CCGCTGGGACGGCCCGGGGCGGCAGCAGCGGCAGCAACTGTGCGCTGCGC
GGCGGCTCCGCTCCCATGGACAGGCTGCAGTCGGCGCCGACGGCGGCGCG
GGGCTGGCAGGCGCTGATGCAACCGGCGGCAACGCCGCTGTGCGACCACC
GGGAGGAGACGGTGGAGCGGGTGGTCAAGAAGGCCGGGCCGAACCAGGGC
AGGCACTTCTTCGTCTGCAAGCGGTCGGCGGGCAACTGGCCCCAGGACCG
CAACGCGCGCTGCGACTTCTTTCAGTGGAGCACGAAGGGCGTGCAGGGCT
TCAAG
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