mRNA_P-wetherbeei_contig11617.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: A0A6H5KUC8_9PHAE (DNA-(apurinic or apyrimidinic site) endonuclease 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUC8_9PHAE) HSP 1 Score: 140 bits (352), Expect = 2.620e-32 Identity = 139/448 (31.03%), Postives = 175/448 (39.06%), Query Frame = 1 Query: 1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGLRG-AVTDSDVWPGTQGSDHCPVHAEFDLSR---LPDGGGGSSAAGRALEGAAVGPDAIHPPECSCFYPEYSGKQVKIRTFFARSG----AAAANGGDGATTXXXXXXXXSVEKSCSDXXXXXAEGSAGPRAAASKSTTASLFDAFASSVRMPAAGGGWGAKCGACKSGRKAAGKRAAMGKGGKPAPDKQMKLTAFMAAPGDGGGK----AEGNYSKENLPVKAYAAEAEPRTEPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELTAAXXXXTAGAXXXXXXXXXXXXXXXXXXXXXXXXXXARGGSSGSNCALRGGSAPMDRLQSAPTAARGWQALM-QPAATPLCDHREETVERVVKKAGPNQGRHFFVCKRSAGNWPQDRNARCDFFQWSTKGVQGFK 1305 P R+ A+TCW T+TGARDNNYG+RIDYI+ A+ D+ P GSDHCPV A F L G S + HPPECSCFYPE + KQ K+ +F G +A G GA ++ D A G P A + A + +P G G K GA +G + G PG GG + A G + +N+ A AA R P+ R A A XXXXX XXXXX G G N A GGS +A W+A+ + + P C+H E +++R V K GPN R F+ C RSAGNWP DRNARC FFQW GV+G+K Sbjct: 274 PDRKGAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRACDIMPDFLGSDHCPVRARFAFPLAVGLAADAPGKSEGDEIARSRSESELPEHPPECSCFYPELTAKQEKLAKYFVAGGQNEESAVGTEGKGA-----------YDRLIGDRNGAGASGVTRPAAGGRRGVVAFMR-------ALP--GTGVTGKDGAGVAGSLMMRAKKVGSAGRTSXXXXXXXXXXXXXRPGSGGSRQSKLAFGPVANDNVSTSAGAAS---REAPAGGRGEVSGTRRRAEGAVPLRTGNERAGGGGAQTSQAIQPPRSTVHASGGGHDTAGAXXXXXSVSTIGSSRISKPXXXXXVDTGSGEGPNGA--GGSRD---------SAEAWKAIFGRKKSAPTCEHGEPSIQRTVLKPGPNHNRRFYTCARSAGNWPTDRNARCTFFQWRRDGVRGYK 687
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: D7FKG3_ECTSI (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG3_ECTSI) HSP 1 Score: 137 bits (346), Expect = 1.570e-31 Identity = 137/452 (30.31%), Postives = 177/452 (39.16%), Query Frame = 1 Query: 1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGLRG-AVTDSDVWPGTQGSDHCPVHAEFDL---SRLPDGGGGSSAAGRALEGAAVGPDAIHPPECSCFYPEYSGKQVKIRTFFARSG----AAAANGGDGATTXXXXXXXXSVEKSCSDXXXXXAEGSAG-PRAAASKSTTASLFDAFASSVRMPAAGGGWGAKCGACKSGRKAAGKRAAMGKGGKPAPDKQMKLTAFMAAPGDGGGK----AEGNYSKENLPVKAYAAEAEPRTEPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---RELTAAXXXXTAGAXXXXXXXXXXXXXXXXXXXXXXXXXXARGGSSGSNCALRGGSAPMDRLQSAPTAARGWQALM-QPAATPLCDHREETVERVVKKAGPNQGRHFFVCKRSAGNWPQDRNARCDFFQWSTKGVQGFK 1305 P R+ A+TCW T+TGARDNNYG+RIDYI+ A+ D+ P GSDHCPV A F + L G S + HPPECSCFYPE + KQ K+ +F G +A G GA + E + +G A RA T + A S+ M G K G+ +G+ + LTA PG GG + A G + N+ A A E + XXXXXXXX R + TAGA G +G GG D +A W+A+ + + P C+H E +++R V K GPN R F+ C RSAGNWP DRNARC FFQW GV+G+K Sbjct: 261 PDRKSAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRACDIMPDFLGSDHCPVRARFAFPLAAGLAADAPGESEGDEIARSRSASEWPEHPPECSCFYPELTAKQEKLAKYFVAGGQNEESAVGTEGKGADGRLVRDGNGARESGATRPAAGGGKGVAAFMRALPGAGVTGKDGASVAGSLMMR------GKKVGS-------------VGRTSSTSSSGGGSLTARR--PGSGGSRQSKLAFGPAANGNVSTSAGATSREATAGGNGAGSGTSRRAEGTVPLRTCNQRGXXXXXXXXAQTSQAIQPPRSRVHASGGGHDTAGAGGGSGSVSTIGSCRLSNPGGEG------GVETGPGEGPNGGGGSRD-------SAEAWKAIFGRKKSAPTCEHGEPSIQRTVLKPGPNHNRRFYTCARSAGNWPTDRNARCTFFQWRRDGVRGYK 678
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: A0A1S3K520_LINUN (DNA-(apurinic or apyrimidinic site) endonuclease n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3K520_LINUN) HSP 1 Score: 99.0 bits (245), Expect = 1.370e-18 Identity = 50/115 (43.48%), Postives = 64/115 (55.65%), Query Frame = 1 Query: 1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGL-RGAVTDSDVWPGTQGSDHCPVHAEFDLSRLPDGGGGSSAAGRALEGAAVGPDAIHPPECSCFYPEYSGKQVKIRTFFARS 342 P+ +A+TCW T TGAR NYG+RIDYIL S L G V D +WP +GSDHCPV AE + + A +PP C+ F PE+SGKQ K+ FF++S Sbjct: 253 PNEENAFTCWNTSTGARQTNYGTRIDYILASADLCEGLVKDCVIWPDIEGSDHCPVKAELTCN--------------------IVQSAKYPPICTKFMPEFSGKQQKLSEFFSKS 347
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: A0A835ZDF2_9STRA (DNA-(apurinic or apyrimidinic site) endonuclease 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDF2_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 5.350e-18 Identity = 178/454 (39.21%), Postives = 211/454 (46.48%), Query Frame = 1 Query: 1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGL-RGAVTDSDVWPGTQGSDHCPVHAEFDLSRLPDGGGGSSAAGRALEGAAVGPDAIHPPECSCFYPEYSGKQVKIRTFFARSGAAAANGGDGATTXXXXXXXXSVEKSCSDXXXXXAEGSAGPRAAASKSTTAS---LFDAFASSVR------------MPAAGGGWGAKCGACKSGRKAAGKRAAMG--KGGKPAPDKQMKLTAFMAAPGDGGGKAEGNYSKENLPVKAYAAEAEPRTEPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELTAAXXXXTAGAXXXXXXXXXXXXXXXXXXXXXXXXXXARGGSSGSNCALRGGSAPMDRLQSAPTAARGWQALMQPAATPLCD-HREETVERVVKKAGPNQGRHFFVCKRSAGNWPQDRNARCDFFQWSTKGVQGFK 1305 P A+TCW TK GAR NNYG+RIDY+L S R A+ S +WP GSDHCPV A FD A RA AA P HPP+CSCF + K+ FFA + + XXXXXXX + S S E AA + +T S LFD A+ +P AG A + SG A G A G + +KA+ A A PR XXXXXXXXXXXXXXXXXXXX XXXX XXXXXXXXXXXXXXXXXXXXXXXXX RG A R GS+ +D A WQAL+ P+C HRE VER V KAGPNQGR F+ C R G+WP+D NARC++F++ G +G++ Sbjct: 289 PAAERAFTCWNTKKGARANNYGTRIDYVLASAAFARAALRASAIWPHVVGSDHCPVVATFD-------------APRAHAAAAAAP---HPPQCSCFLAAVA--VPKLTAFFAPTRVRSGX------XXXXXXXXDNASDSASQPPELACE-------AAEEDSTLSCEALFDVPAARFVQEPQDPILPPPCIPRAGATAVAPFFSGSSGGGANGVPRAQGFTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRGMTQMTLKAFGAAA-PRXX----------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRGSD-----ASRAGSSGVD-------AKSAWQALLAKRPPPVCSGHREPAVERTVLKAGPNQGRRFYCCARGEGDWPKDPNARCNYFEFRESGARGYR 676
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: A0A0C2XZL0_9AGAM (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C2XZL0_9AGAM) HSP 1 Score: 94.7 bits (234), Expect = 4.320e-17 Identity = 55/123 (44.72%), Postives = 70/123 (56.91%), Query Frame = 1 Query: 1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGLRGAVTDSDVWPGTQGSDHCPVHAEFDLSRLPDGGGGSSAAGRALEGAAVGPDAIH--PPECSCFYPEYSGKQVKIRTFFA-RSGAAAAN 360 P R YTCW TKT ARD NYG+RID ILI+ GLR V D+D+ P +GSDHCPV +F + + DG G A+ G+ G P C+ + EYS KQ + TFF R+ + AN Sbjct: 204 PTREGMYTCWNTKTSARDGNYGTRIDLILITPGLRRWVKDADIQPLVKGSDHCPVFLDFHDTII-DGEGRELKLSDAIRGSTTGSMGTRELPRICARNWDEYSAKQTLLSTFFTPRTASTLAN 325
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: A0A067D204_SAPPC (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D204_SAPPC) HSP 1 Score: 92.0 bits (227), Expect = 1.490e-16 Identity = 48/114 (42.11%), Postives = 61/114 (53.51%), Query Frame = 1 Query: 1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGLRGAVTDSDVWPGTQGSDHCPVHAEFDLSRLPDGGGGSSAAGRALEGAAVGPDAIHPPECSCFYPEYSGKQVKIRTFFARS 342 P R AYTCW+ TGAR+ NYG R+DYIL+ L A+T DVW +GSDHCPV A L+ P + P + P C+ FYPE++GKQ I+ F S Sbjct: 193 PMREKAYTCWRALTGARETNYGVRLDYILLDSRLGSALTSCDVWQEKEGSDHCPVLATLSLA-FP-------------ASHVIAPTTV--PSCAKFYPEFAGKQTSIQRFLRGS 290
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: A0A369J694_HYPMA (DNA-(Apurinic or apyrimidinic site) lyase 2 n=1 Tax=Hypsizygus marmoreus TaxID=39966 RepID=A0A369J694_HYPMA) HSP 1 Score: 92.4 bits (228), Expect = 2.220e-16 Identity = 53/120 (44.17%), Postives = 70/120 (58.33%), Query Frame = 1 Query: 1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGLRGAVTDSDVWPGTQGSDHCPVHAEFDLSRLPDGGGGSSAAGRALEGAAV-GPDAIHPPECSC-FYPEYSGKQVKIRTFFARSGAAA 354 P R+ YTCW TK ARD+NYG+RIDYILI+ GL V +D+ P +GSDHCPV+ DL G+ R + G G ++ PP + F+ EYSGKQ+ + FF R+G A Sbjct: 266 PDRKGMYTCWNTKISARDSNYGTRIDYILITRGLLPWVKGADIQPQIKGSDHCPVY--LDLQESITNNDGTVVHLRDVLGLKQDGDNSSEPPRLAAKFWDEYSGKQMLLEKFFGRTGDLA 383
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: A0A8H3E5K0_9AGAM (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3E5K0_9AGAM) HSP 1 Score: 89.7 bits (221), Expect = 1.530e-15 Identity = 49/122 (40.16%), Postives = 68/122 (55.74%), Query Frame = 1 Query: 1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGLRGAVTDSDVWPGTQGSDHCPVHAEF---------DLSRLPDGGGGSSAAGRALEGAAVGPDAIHPPECSCFYPEYSGKQVKIRTFFAR 339 P R +TCW T+ AR++NYG+RIDYIL++ GL D+ P +GSDHCPV +F +SRL D GGS +G+ + PP + F+ E+SGKQ + TFFA+ Sbjct: 248 PDREKMFTCWDTRINARESNYGTRIDYILVTKGLLPWFKHGDIQPDIRGSDHCPVFIDFHDEITSPDGQVSRLVDVLGGSDTSGQRRD---------PPPISTKFWSEFSGKQKLLSTFFAK 360
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: A0A0H2R7U9_9AGAM (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Schizopora paradoxa TaxID=27342 RepID=A0A0H2R7U9_9AGAM) HSP 1 Score: 88.2 bits (217), Expect = 5.620e-15 Identity = 48/115 (41.74%), Postives = 66/115 (57.39%), Query Frame = 1 Query: 1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGLRGAVTDSDVWPGTQGSDHCPVHAEFDLSRLPDGGGGSSAAGRAL-EGAAVGPDAIHPPE-CSCFYPEYSGKQVKIRTFFAR 339 P R+ YTCW TK AR+ NYG+RIDYIL+S GL D+ P +GSDHCPV+ + L D G + R L + + + PP C+ F+PE+SGKQ + +FF + Sbjct: 278 PDRKGMYTCWNTKISARETNYGTRIDYILLSRGLLPWFKHGDIMPSVRGSDHCPVYID-----LHDEIAGENGEVRKLRDEMQMSSERREPPRLCAKFWPEFSGKQQLLSSFFGK 387
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: A0A8J7NU70_ATRSP (DNA-(apurinic or apyrimidinic site) endonuclease (Fragment) n=1 Tax=Atractosteus spatula TaxID=7917 RepID=A0A8J7NU70_ATRSP) HSP 1 Score: 87.4 bits (215), Expect = 6.040e-15 Identity = 50/124 (40.32%), Postives = 60/124 (48.39%), Query Frame = 1 Query: 1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGLRGA-VTDSDVWPGTQGSDHCPVHAEFDLSRLPDGGGGSSAAGRALEGAAVGPDAIHPPECSCFYPEYSGKQVKIRTFFARSGAAAANGGD 369 P R A+TCW T TGAR NYG+RIDYIL S GL A DSD+ P +GSDHCPV + L PP C+ PE+ G+Q K+ F + G AAA D Sbjct: 115 PARSHAFTCWSTVTGARQTNYGTRIDYILASRGLAEAEFLDSDILPEVEGSDHCPVRGHLRCALLSS--------------------PRCPPLCTRHMPEFMGRQQKLSRFLVKVGQAAATAAD 218 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11617.2.1 >prot_P-wetherbeei_contig11617.2.1 ID=prot_P-wetherbeei_contig11617.2.1|Name=mRNA_P-wetherbeei_contig11617.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=435bp PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGLRGAVTDSDVWPGTQGSback to top mRNA from alignment at P-wetherbeei_contig11617:1..1305+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11617.2.1 ID=mRNA_P-wetherbeei_contig11617.2.1|Name=mRNA_P-wetherbeei_contig11617.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1305bp|location=Sequence derived from alignment at P-wetherbeei_contig11617:1..1305+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11617:1..1305+ >mRNA_P-wetherbeei_contig11617.2.1 ID=mRNA_P-wetherbeei_contig11617.2.1|Name=mRNA_P-wetherbeei_contig11617.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1305bp|location=Sequence derived from alignment at P-wetherbeei_contig11617:1..1305+ (Phaeothamnion wetherbeei SAG_119_79)back to top |