prot_P-wetherbeei_contig10111.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig10111.1.1
Unique Name	prot_P-wetherbeei_contig10111.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	130

Homology

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BLAST of mRNA_P-wetherbeei_contig10111.1.1 vs. uniprot
Match: A0A1E7FMC8_9STRA (GTP-binding nuclear protein n=19 Tax=Ochrophyta TaxID=2696291 RepID=A0A1E7FMC8_9STRA)

HSP 1 Score: 258 bits (658), Expect = 1.000e-85
Identity = 120/125 (96.00%), Postives = 122/125 (97.60%), Query Frame = 0

Query:    6 PEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVRPLRFHTNRGPLKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVSS 130
            PEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEV PL FHTNRGP+KFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKV +
Sbjct:    7 PEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLNFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKA 131

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BLAST of mRNA_P-wetherbeei_contig10111.1.1 vs. uniprot
Match: D7G7A6_ECTSI (GTP-binding nuclear protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7A6_ECTSI)

HSP 1 Score: 257 bits (656), Expect = 1.890e-85
Identity = 120/129 (93.02%), Postives = 125/129 (96.90%), Query Frame = 0

Query:    2 AAQEPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVRPLRFHTNRGPLKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVSS 130
            A + PEFKLILVGDGGVGKTTFVKRH+TGEFEKKYVATLGVEVRPL FHTNRGP+KFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCE+IPIVLCGNKVEIKDRKV +
Sbjct:    2 AQEMPEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKA 130

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BLAST of mRNA_P-wetherbeei_contig10111.1.1 vs. uniprot
Match: A0A7S2RFE4_9STRA (GTP-binding nuclear protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RFE4_9STRA)

HSP 1 Score: 257 bits (656), Expect = 2.090e-85
Identity = 123/130 (94.62%), Postives = 125/130 (96.15%), Query Frame = 0

Query:    2 AAQ-EPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVRPLRFHTNRGPLKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVSS 130
            AAQ  PEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEV PL FHTNRGP+KFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKV +
Sbjct:    3 AAQGSPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKA 132

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BLAST of mRNA_P-wetherbeei_contig10111.1.1 vs. uniprot
Match: A0A7R9ZLZ6_9STRA (GTP-binding nuclear protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZLZ6_9STRA)

HSP 1 Score: 258 bits (658), Expect = 6.370e-85
Identity = 121/128 (94.53%), Postives = 124/128 (96.88%), Query Frame = 0

Query:    3 AQEPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVRPLRFHTNRGPLKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVSS 130
            +QEPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEV PL FHTNRGP+KFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVL GNKVEIKDRKV +
Sbjct:   60 SQEPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLTFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKA 187

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BLAST of mRNA_P-wetherbeei_contig10111.1.1 vs. uniprot
Match: A0A7S3P9E4_9STRA (GTP-binding nuclear protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P9E4_9STRA)

HSP 1 Score: 255 bits (652), Expect = 8.230e-85
Identity = 121/128 (94.53%), Postives = 123/128 (96.09%), Query Frame = 0

Query:    3 AQEPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVRPLRFHTNRGPLKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVSS 130
            AQ PEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEV PL FHTNRGP+KFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVL GNKVEIKDRKV +
Sbjct:    4 AQMPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKA 131

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BLAST of mRNA_P-wetherbeei_contig10111.1.1 vs. uniprot
Match: A0A835YR82_9STRA (GTP-binding nuclear protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR82_9STRA)

HSP 1 Score: 253 bits (646), Expect = 6.100e-84
Identity = 120/128 (93.75%), Postives = 123/128 (96.09%), Query Frame = 0

Query:    3 AQEPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVRPLRFHTNRGPLKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVSS 130
            A+ PEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVRPL FHTNRGP+KFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVP WHRDLTRVCENIPIVL GNKVEIKDRKV +
Sbjct:    2 AEMPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVRPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPYWHRDLTRVCENIPIVLTGNKVEIKDRKVKA 129

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BLAST of mRNA_P-wetherbeei_contig10111.1.1 vs. uniprot
Match: A0A7S1UW08_9STRA (GTP-binding nuclear protein n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S1UW08_9STRA)

HSP 1 Score: 255 bits (651), Expect = 6.280e-84
Identity = 120/129 (93.02%), Postives = 123/129 (95.35%), Query Frame = 0

Query:    2 AAQEPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVRPLRFHTNRGPLKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVSS 130
            A + PEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEV PL FHTNRGP+KFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVL GNKVEIKDRKV +
Sbjct:   54 AQEPPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLTFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLVGNKVEIKDRKVKA 182

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BLAST of mRNA_P-wetherbeei_contig10111.1.1 vs. uniprot
Match: A0A1S3I259_LINUN (GTP-binding nuclear protein n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3I259_LINUN)

HSP 1 Score: 252 bits (644), Expect = 1.500e-83
Identity = 115/130 (88.46%), Postives = 122/130 (93.85%), Query Frame = 0

Query:    1 QAAQEPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVRPLRFHTNRGPLKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVSS 130
            Q   EP FKL+LVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEV PL FHTNRGP+KFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVT+R+TYKNVPNWHRDL RVCENIP+VLCGNKV+IKDRKV +
Sbjct:    6 QGTDEPTFKLVLVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLLFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHRDLVRVCENIPMVLCGNKVDIKDRKVKA 135

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BLAST of mRNA_P-wetherbeei_contig10111.1.1 vs. uniprot
Match: A0A7S2CHG2_9STRA (GTP-binding nuclear protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CHG2_9STRA)

HSP 1 Score: 253 bits (645), Expect = 1.580e-83
Identity = 118/125 (94.40%), Postives = 121/125 (96.80%), Query Frame = 0

Query:    6 PEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVRPLRFHTNRGPLKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVSS 130
            PEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEV PL FHTNRG L+FNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKV+IKDRKV +
Sbjct:   22 PEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLSFHTNRGALRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVDIKDRKVKA 146

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BLAST of mRNA_P-wetherbeei_contig10111.1.1 vs. uniprot
Match: W7TTE5_9STRA (GTP-binding nuclear protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTE5_9STRA)

HSP 1 Score: 251 bits (641), Expect = 3.640e-83
Identity = 117/123 (95.12%), Postives = 120/123 (97.56%), Query Frame = 0

Query:    6 PEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVRPLRFHTNRGPLKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKV 128
            PEFKLILVGDGGVGKTTFV+RHLTGEFEK+YVATLGVEV PL FHTNRG +KFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKV
Sbjct:    6 PEFKLILVGDGGVGKTTFVRRHLTGEFEKRYVATLGVEVHPLLFHTNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKV 128

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig10111.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig10111.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A1E7FMC8_9STRA	1.000e-85	96.00	GTP-binding nuclear protein n=19 Tax=Ochrophyta Ta...	[more]
D7G7A6_ECTSI	1.890e-85	93.02	GTP-binding nuclear protein n=2 Tax=Ectocarpus Tax...	[more]
A0A7S2RFE4_9STRA	2.090e-85	94.62	GTP-binding nuclear protein n=1 Tax=Eucampia antar...	[more]
A0A7R9ZLZ6_9STRA	6.370e-85	94.53	GTP-binding nuclear protein n=1 Tax=Craspedostauro...	[more]
A0A7S3P9E4_9STRA	8.230e-85	94.53	GTP-binding nuclear protein n=2 Tax=Amphora coffei...	[more]
A0A835YR82_9STRA	6.100e-84	93.75	GTP-binding nuclear protein n=2 Tax=Tribonema minu...	[more]
A0A7S1UW08_9STRA	6.280e-84	93.02	GTP-binding nuclear protein n=2 Tax=Bacillariophyt...	[more]
A0A1S3I259_LINUN	1.500e-83	88.46	GTP-binding nuclear protein n=1 Tax=Lingula unguis...	[more]
A0A7S2CHG2_9STRA	1.580e-83	94.40	GTP-binding nuclear protein n=1 Tax=Dictyocha spec...	[more]
W7TTE5_9STRA	3.640e-83	95.12	GTP-binding nuclear protein n=2 Tax=Monodopsidacea...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002041	Ran GTPase	PRINTS	PR00627	GTPRANTC4	coord: 88..109 score: 84.62 coord: 21..35 score: 95.13 coord: 68..86 score: 89.88 coord: 124..130 score: 20.65
IPR002041	Ran GTPase	PANTHER	PTHR24071	RAN GTPASE	coord: 6..129
IPR002041	Ran GTPase	PROSITE	PS51418	RAN	coord: 1..130 score: 21.83659
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 10..130 e-value: 7.3E-5 score: -55.1
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 9..129 e-value: 2.9E-40 score: 137.5
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 3..130 score: 10.878613
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 8..130 e-value: 3.2E-11 score: 30.5
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 13..130 e-value: 3.2E-58 score: 209.4
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 5..130 e-value: 1.8E-7 score: -5.3
None	No IPR available	PANTHER	PTHR24071:SF17	GTP-BINDING NUCLEAR PROTEIN RAN	coord: 6..129
None	No IPR available	PROSITE	PS51419	RAB	coord: 3..130 score: 17.235462
None	No IPR available	CDD	cd00877	Ran	coord: 8..128 e-value: 4.20019E-95 score: 269.171
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 7..125 e-value: 3.9E-23 score: 80.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..130 e-value: 1.7E-48 score: 166.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 5..127

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig10111	contig	P-wetherbeei_contig10111:1144..2246 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig10111.1.1	mRNA_P-wetherbeei_contig10111.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig10111 1144..2246 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig10111.1.1 ID=prot_P-wetherbeei_contig10111.1.1|Name=mRNA_P-wetherbeei_contig10111.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=130bp
QAAQEPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVRPLRFH
TNRGPLKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPN
WHRDLTRVCENIPIVLCGNKVEIKDRKVSS

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002041	Ran_GTPase
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase