prot_P-wetherbeei_contig1011.6.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1011.6.1
Unique Nameprot_P-wetherbeei_contig1011.6.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length177
Homology
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BLAST of mRNA_P-wetherbeei_contig1011.6.1 vs. uniprot
Match: A0A836CMF7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMF7_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.100e-6
Identity = 46/128 (35.94%), Postives = 55/128 (42.97%), Query Frame = 0 
Query:   50 ACRLLRAAVALLPAGNGPPSARDVSQPSFNLALVLWRLGRRDAACVHWLRARGHSTDAGAARHDALLRAARLRLADGGGGDRNGGGSRSSDRGHAPLYPWEAAGXXXXXLRTPPSQACALDVLVFEHW 177
            AC  LRAA+A  PA   P         +FNLAL+LWR GRR+AAC  WLRAR    ++    + A LR AR   A                                  L  PP+Q  ALDV+V  HW
Sbjct:  782 ACGHLRAALAFEPAAVAP---------AFNLALLLWRGGRREAACRAWLRARAFGEESDVDVYAARLREARQCKA----------AXXXXXXXXXXXXXXXRRAQGGCGLEVPPAQLYALDVMVLTHW 890
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1011.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CMF7_9STRA1.100e-635.94Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 23..124
e-value: 3.4E-6
score: 28.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 26..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1011contigP-wetherbeei_contig1011:6959..7588 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1011.6.1mRNA_P-wetherbeei_contig1011.6.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1011 6959..7588 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1011.6.1 ID=prot_P-wetherbeei_contig1011.6.1|Name=mRNA_P-wetherbeei_contig1011.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=177bp
MRGNGRSAGGGGGGRSSGSHGCARRKALALAVAYNNAALTLVVRGRLIEA
CRLLRAAVALLPAGNGPPSARDVSQPSFNLALVLWRLGRRDAACVHWLRA
RGHSTDAGAARHDALLRAARLRLADGGGGDRNGGGSRSSDRGHAPLYPWE
AAGGGGGGLRTPPSQACALDVLVFEHW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf