prot_P-wetherbeei_contig10095.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig10095.1.1
Unique Nameprot_P-wetherbeei_contig10095.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length159
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig10095.1.1 vs. uniprot
Match: A0A7S2RWM3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RWM3_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 7.320e-15
Identity = 41/108 (37.96%), Postives = 56/108 (51.85%), Query Frame = 0 
Query:   26 LSLCVAAAGFSPMPSKASGAQRFNVYGPARLVRGDVDPWYKNFH-----AHDYGETGLFMPTGMHCCAADLVSFHYVMPAEQAHLYDMVYHRERHAALTPAQLAAAWP 128
            L+ C+ ++G  P  +      RF+ YGP R+V G VD WY+N+H     A +    G     G+ CCAAD  SFHYV  AE   LY ++  + R  A+      AAWP
Sbjct:   13 LADCLHSSGVLPNSTLYLSKDRFHPYGPKRMVYGQVDQWYRNYHRFRKTAENGTREGGGASEGVACCAADSASFHYVEAAECRTLYAVISDQHRFRAMNRTSRHAAWP 120
[Close]
BLAST of mRNA_P-wetherbeei_contig10095.1.1 vs. uniprot
Match: A0A7S2R8W1_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R8W1_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 1.590e-12
Identity = 41/131 (31.30%), Postives = 64/131 (48.85%), Query Frame = 0 
Query:   26 LSLCVAAAGFSPMPSKASGAQRFNVYGPARLVRGDVDPWYKNFHAHDYGETGLFMPTGMHCCAADLVSFHYVMPAEQAHLYDMVYHRERHAALTPAQLAAAWPEEHV--DVAFRPREE--DDDVWTLLLQK 152
            L +     G   + + AS   R +VYGP RL+ G+VD W++ +     G TG     G  CC+A  +SFHY    EQ  L D++     + A+ P  L   WP   +    ++ P+++  ++ VW  LL K
Sbjct:  479 LGVVPEELGGGDVLADASTGSRLHVYGPVRLISGNVDDWWRRYRE---GATGAPPQAGEDCCSALTISFHYAFGPEQKLLDDVLRRPAHYTAMDPGTLRGQWPSPQLLGGYSYFPKDQVTEEKVWDFLLHK 606
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10095.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S2RWM3_9STRA7.320e-1537.96Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2R8W1_9STRA1.590e-1231.30Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10095contigP-wetherbeei_contig10095:596..1411 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10095.1.1mRNA_P-wetherbeei_contig10095.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig10095 2..1638 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig10095.1.1 ID=prot_P-wetherbeei_contig10095.1.1|Name=mRNA_P-wetherbeei_contig10095.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=159bp
MSAVLALVDGPADRRGRCDVAHHQWLSLCVAAAGFSPMPSKASGAQRFNV
YGPARLVRGDVDPWYKNFHAHDYGETGLFMPTGMHCCAADLVSFHYVMPA
EQAHLYDMVYHRERHAALTPAQLAAAWPEEHVDVAFRPREEDDDVWTLLL
QKLQVCSG*
back to top