Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 2741 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Ec32 ortholog description | Nucleic acid-binding, OB-fold |
| Ec32 ortholog | Ec-03_002260.2 |
| Cds size | 2739 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683185891.3064623-CDS-P-wetherbeei_contig1095:3..2742 | 1683185891.3064623-CDS-P-wetherbeei_contig1095:3..2742 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1095 4..2742 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1095.1.1 >prot_P-wetherbeei_contig1095.1.1 ID=prot_P-wetherbeei_contig1095.1.1|Name=mRNA_P-wetherbeei_contig1095.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=913bp
PGICQDSRQRPLQPMQAIDPEVHANALVRGVAPQPSRPESGLFGVQRVPA
AANAGVFDGGGGSSSGGGNGSDGSAGSSSSNDGGTGVPISFSTSKGRRLH
VSAEGLARIEHTSQEPASIGEGTDGGAGDGRGVKRTSSAASIFGGASAML
APARLILPARMLPASGALLPGLGGCGSGSGSSGSGTSGWGGSSGSGGGGG
AISFSTGNGRPIHVSEESLARAERMFRESVDRADGAAAAVAPAPTAAPAS
ASHCETAFAQRGSGSGSAAASAVAALAGAAAAPTTNVPPPPRAGAAGQMT
ETSGDTGGGGRDSGGSCADSSAVSFSTGKGRRLHVSAESLARIEHMFQEP
TAGAEVAAAAAAAVPARPASGAGSGEGATNGGGSGASSGGVFASVTPLPP
PPLLPPQQHQRASRSFSAPLPSGQNGGGGSKGGRAAGRPETLLARALSTA
AVATGEVGAPAFHPPGAAASFGKSSGGSAGGITFRTAGKNNAVTASAASL
ASAQRWLEIATSLSCQSTLVTLAPAASSSVSNSRQSTGGSSNGGGSSRSG
AAWPEVATPRAAVGGGQMNSDFVDRRASGAGGDEAGGRQEIATGSSCLRA
WGAGAGSRHDSGCGGGAEAPRQFQLLPLPGGVSGAACSTPLRPYPASVGG
PQPIWDQTPGAADGGDGAGLVQQPPAAAGPVKLAQPATAPLPPPPPLPPP
AAATAHSSSSLDASVARAAAEAAQGVAAAAIARNAQTPDAPRWQQQQRWS
YGGQTPASASNRRNSTASSSSVARLNPYASRHSNPYALSPAPPAKRAAAP
YAAVPAAAAAAAAAVLTTNRSQQCAAAMPIGDSSQMRDAPPTGNSGNSHG
GGGSGSSSGSACFGDGGGCRRGVSSTPKVANPYATPRNLYGMPASQAQTP
PQPLWMLGVPPAA back to topmRNA from alignment at P-wetherbeei_contig1095:2..2742- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig1095.1.1 ID=mRNA_P-wetherbeei_contig1095.1.1|Name=mRNA_P-wetherbeei_contig1095.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2741bp|location=Sequence derived from alignment at P-wetherbeei_contig1095:2..2742- (Phaeothamnion wetherbeei SAG_119_79)
CCAGGAATTTGCCAAGATAGCCGGCAGCGACCGTTGCAGCCGATGCAGGC
CATAGATCCAGAAGTGCACGCAAATGCTTTAGTTCGCGGCGTGGCACCTC
AACCTAGCAGACCTGAGTCCGGTCTATTTGGTGTGCAACGCGTGCCGGCA
GCAGCCAATGCCGGCGTCTTCGATGGAGGTGGCGGGAGCAGCAGCGGTGG
CGGCAATGGCAGCGACGGTAGCGCGGGCAGCAGCAGCAGCAATGACGGTG
GCACCGGCGTGCCAATCTCGTTCAGCACCAGCAAAGGACGGCGGCTACAC
GTCTCTGCCGAAGGCTTGGCTCGAATAGAGCACACGTCCCAGGAGCCAGC
TTCGATCGGCGAAGGGACAGACGGAGGCGCTGGCGATGGCCGTGGCGTAA
AGCGGACCTCTTCAGCGGCGTCCATTTTCGGCGGCGCGAGCGCAATGCTG
GCGCCGGCGCGTCTCATCTTGCCCGCGCGCATGTTGCCAGCATCGGGAGC
TCTTCTGCCAGGGCTTGGCGGCTGCGGCAGTGGCAGCGGCAGCAGTGGCA
GCGGCACCAGTGGCTGGGGTGGCAGTAGTGGCAGCGGCGGCGGCGGCGGA
GCAATATCCTTCAGCACAGGCAACGGGCGGCCGATCCACGTGTCAGAAGA
GAGCCTGGCGAGGGCGGAACGCATGTTTCGCGAGTCGGTCGACAGGGCTG
ACGGGGCGGCAGCGGCGGTGGCGCCGGCGCCTACTGCTGCGCCAGCGAGC
GCCAGCCACTGCGAAACCGCTTTCGCGCAACGCGGCAGCGGAAGCGGTTC
TGCTGCTGCCTCCGCCGTTGCGGCGCTTGCTGGAGCAGCAGCAGCACCTA
CAACAAACGTGCCGCCACCGCCTCGGGCAGGTGCTGCAGGCCAGATGACT
GAGACTAGCGGCGATACCGGCGGCGGCGGCCGTGATAGCGGCGGTAGCTG
TGCTGACAGCAGCGCTGTCTCGTTTAGCACGGGGAAAGGACGACGCCTTC
ACGTGTCTGCTGAGAGCTTGGCGCGCATCGAGCACATGTTTCAGGAGCCG
ACAGCAGGGGCAGAGGTGGCGGCGGCGGCAGCAGCAGCCGTTCCGGCACG
CCCTGCTTCAGGCGCCGGCAGTGGTGAGGGTGCGACCAACGGCGGTGGCA
GCGGCGCATCAAGTGGTGGCGTTTTCGCCAGTGTGACGCCGCTGCCGCCG
CCACCGTTGCTGCCCCCGCAGCAGCATCAGCGAGCGTCGCGCAGTTTCAG
CGCGCCTTTGCCGAGCGGTCAGAACGGCGGCGGCGGTTCGAAAGGCGGTC
GTGCTGCAGGGCGGCCGGAAACCCTACTGGCAAGAGCACTTTCAACGGCG
GCGGTCGCAACCGGAGAGGTGGGCGCTCCTGCCTTTCACCCCCCTGGCGC
TGCAGCCTCTTTCGGCAAGAGCAGCGGTGGCTCTGCCGGTGGCATTACAT
TTCGTACGGCAGGCAAGAACAATGCGGTGACAGCGTCAGCGGCAAGCCTC
GCCAGCGCGCAGCGCTGGCTGGAAATCGCCACCAGCTTGTCGTGCCAATC
GACGCTGGTAACGTTGGCACCAGCCGCGTCTTCCTCGGTAAGCAACAGCC
GCCAGAGCACCGGCGGCAGCAGCAATGGCGGCGGCAGCAGCAGAAGCGGT
GCCGCCTGGCCAGAGGTCGCAACGCCGCGGGCTGCCGTGGGAGGCGGCCA
AATGAACAGCGACTTTGTCGACCGCCGCGCGTCTGGCGCAGGTGGGGACG
AGGCCGGCGGCCGGCAGGAGATAGCGACCGGCTCTTCTTGTCTGCGGGCG
TGGGGCGCCGGCGCGGGCAGCAGACATGATTCCGGCTGCGGCGGCGGTGC
GGAAGCGCCGCGACAGTTCCAGTTGCTGCCGTTGCCGGGCGGAGTCTCCG
GCGCGGCGTGCTCTACGCCGCTACGTCCGTACCCAGCATCCGTCGGCGGG
CCGCAGCCGATCTGGGACCAGACGCCAGGAGCGGCAGATGGAGGTGACGG
GGCCGGGCTAGTCCAACAGCCGCCGGCCGCTGCCGGGCCTGTAAAGCTGG
CGCAACCAGCGACGGCACCTCTGCCGCCGCCACCGCCGCTGCCACCGCCG
GCGGCAGCAACCGCCCATTCGAGTTCTTCTTTGGATGCGTCGGTGGCACG
GGCAGCCGCGGAAGCGGCGCAGGGGGTGGCAGCGGCGGCGATAGCAAGGA
ATGCGCAGACTCCGGACGCCCCTCGGTGGCAGCAGCAGCAACGCTGGAGT
TACGGCGGGCAAACGCCGGCCAGCGCGTCCAACCGCCGGAACAGTACTGC
ATCTTCATCATCGGTCGCCAGGCTGAATCCGTACGCGAGCCGTCACAGCA
ACCCGTACGCGCTGTCTCCTGCGCCACCCGCAAAGCGTGCTGCCGCGCCA
TACGCTGCCGTTCCGGCTGCAGCGGCGGCGGCGGCAGCGGCGGTGTTAAC
AACGAATCGCAGCCAGCAGTGCGCGGCAGCCATGCCCATAGGCGATTCCT
CGCAGATGCGTGACGCCCCGCCAACCGGGAATAGTGGGAACTCCCATGGA
GGCGGTGGCAGCGGCAGCAGCAGTGGCAGCGCTTGCTTCGGTGACGGCGG
AGGCTGCCGCCGAGGAGTCAGCAGCACTCCGAAAGTCGCAAATCCGTATG
CGACCCCGCGAAACCTGTACGGCATGCCAGCTTCACAAGCACAAACGCCT
CCGCAGCCATTGTGGATGCTTGGGGTGCCGCCTGCTGCGGC back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig1095:2..2742- >mRNA_P-wetherbeei_contig1095.1.1 ID=mRNA_P-wetherbeei_contig1095.1.1|Name=mRNA_P-wetherbeei_contig1095.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2739bp|location=Sequence derived from alignment at P-wetherbeei_contig1095:2..2742- (Phaeothamnion wetherbeei SAG_119_79)
CCAGGAATTTGCCAAGATAGCCGGCAGCGACCGTTGCAGCCGATGCAGGC
CATAGATCCAGAAGTGCACGCAAATGCTTTAGTTCGCGGCGTGGCACCTC
AACCTAGCAGACCTGAGTCCGGTCTATTTGGTGTGCAACGCGTGCCGGCA
GCAGCCAATGCCGGCGTCTTCGATGGAGGTGGCGGGAGCAGCAGCGGTGG
CGGCAATGGCAGCGACGGTAGCGCGGGCAGCAGCAGCAGCAATGACGGTG
GCACCGGCGTGCCAATCTCGTTCAGCACCAGCAAAGGACGGCGGCTACAC
GTCTCTGCCGAAGGCTTGGCTCGAATAGAGCACACGTCCCAGGAGCCAGC
TTCGATCGGCGAAGGGACAGACGGAGGCGCTGGCGATGGCCGTGGCGTAA
AGCGGACCTCTTCAGCGGCGTCCATTTTCGGCGGCGCGAGCGCAATGCTG
GCGCCGGCGCGTCTCATCTTGCCCGCGCGCATGTTGCCAGCATCGGGAGC
TCTTCTGCCAGGGCTTGGCGGCTGCGGCAGTGGCAGCGGCAGCAGTGGCA
GCGGCACCAGTGGCTGGGGTGGCAGTAGTGGCAGCGGCGGCGGCGGCGGA
GCAATATCCTTCAGCACAGGCAACGGGCGGCCGATCCACGTGTCAGAAGA
GAGCCTGGCGAGGGCGGAACGCATGTTTCGCGAGTCGGTCGACAGGGCTG
ACGGGGCGGCAGCGGCGGTGGCGCCGGCGCCTACTGCTGCGCCAGCGAGC
GCCAGCCACTGCGAAACCGCTTTCGCGCAACGCGGCAGCGGAAGCGGTTC
TGCTGCTGCCTCCGCCGTTGCGGCGCTTGCTGGAGCAGCAGCAGCACCTA
CAACAAACGTGCCGCCACCGCCTCGGGCAGGTGCTGCAGGCCAGATGACT
GAGACTAGCGGCGATACCGGCGGCGGCGGCCGTGATAGCGGCGGTAGCTG
TGCTGACAGCAGCGCTGTCTCGTTTAGCACGGGGAAAGGACGACGCCTTC
ACGTGTCTGCTGAGAGCTTGGCGCGCATCGAGCACATGTTTCAGGAGCCG
ACAGCAGGGGCAGAGGTGGCGGCGGCGGCAGCAGCAGCCGTTCCGGCACG
CCCTGCTTCAGGCGCCGGCAGTGGTGAGGGTGCGACCAACGGCGGTGGCA
GCGGCGCATCAAGTGGTGGCGTTTTCGCCAGTGTGACGCCGCTGCCGCCG
CCACCGTTGCTGCCCCCGCAGCAGCATCAGCGAGCGTCGCGCAGTTTCAG
CGCGCCTTTGCCGAGCGGTCAGAACGGCGGCGGCGGTTCGAAAGGCGGTC
GTGCTGCAGGGCGGCCGGAAACCCTACTGGCAAGAGCACTTTCAACGGCG
GCGGTCGCAACCGGAGAGGTGGGCGCTCCTGCCTTTCACCCCCCTGGCGC
TGCAGCCTCTTTCGGCAAGAGCAGCGGTGGCTCTGCCGGTGGCATTACAT
TTCGTACGGCAGGCAAGAACAATGCGGTGACAGCGTCAGCGGCAAGCCTC
GCCAGCGCGCAGCGCTGGCTGGAAATCGCCACCAGCTTGTCGTGCCAATC
GACGCTGGTAACGTTGGCACCAGCCGCGTCTTCCTCGGTAAGCAACAGCC
GCCAGAGCACCGGCGGCAGCAGCAATGGCGGCGGCAGCAGCAGAAGCGGT
GCCGCCTGGCCAGAGGTCGCAACGCCGCGGGCTGCCGTGGGAGGCGGCCA
AATGAACAGCGACTTTGTCGACCGCCGCGCGTCTGGCGCAGGTGGGGACG
AGGCCGGCGGCCGGCAGGAGATAGCGACCGGCTCTTCTTGTCTGCGGGCG
TGGGGCGCCGGCGCGGGCAGCAGACATGATTCCGGCTGCGGCGGCGGTGC
GGAAGCGCCGCGACAGTTCCAGTTGCTGCCGTTGCCGGGCGGAGTCTCCG
GCGCGGCGTGCTCTACGCCGCTACGTCCGTACCCAGCATCCGTCGGCGGG
CCGCAGCCGATCTGGGACCAGACGCCAGGAGCGGCAGATGGAGGTGACGG
GGCCGGGCTAGTCCAACAGCCGCCGGCCGCTGCCGGGCCTGTAAAGCTGG
CGCAACCAGCGACGGCACCTCTGCCGCCGCCACCGCCGCTGCCACCGCCG
GCGGCAGCAACCGCCCATTCGAGTTCTTCTTTGGATGCGTCGGTGGCACG
GGCAGCCGCGGAAGCGGCGCAGGGGGTGGCAGCGGCGGCGATAGCAAGGA
ATGCGCAGACTCCGGACGCCCCTCGGTGGCAGCAGCAGCAACGCTGGAGT
TACGGCGGGCAAACGCCGGCCAGCGCGTCCAACCGCCGGAACAGTACTGC
ATCTTCATCATCGGTCGCCAGGCTGAATCCGTACGCGAGCCGTCACAGCA
ACCCGTACGCGCTGTCTCCTGCGCCACCCGCAAAGCGTGCTGCCGCGCCA
TACGCTGCCGTTCCGGCTGCAGCGGCGGCGGCGGCAGCGGCGGTGTTAAC
AACGAATCGCAGCCAGCAGTGCGCGGCAGCCATGCCCATAGGCGATTCCT
CGCAGATGCGTGACGCCCCGCCAACCGGGAATAGTGGGAACTCCCATGGA
GGCGGTGGCAGCGGCAGCAGCAGTGGCAGCGCTTGCTTCGGTGACGGCGG
AGGCTGCCGCCGAGGAGTCAGCAGCACTCCGAAAGTCGCAAATCCGTATG
CGACCCCGCGAAACCTGTACGGCATGCCAGCTTCACAAGCACAAACGCCT
CCGCAGCCATTGTGGATGCTTGGGGTGCCGCCTGCTGCG back to top
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