prot_P-wetherbeei_contig1095.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1095.1.1
Unique Nameprot_P-wetherbeei_contig1095.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length913
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1095.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002093BRCA2 repeatPFAMPF00634BRCA2coord: 201..228
e-value: 4.5E-8
score: 32.4
IPR002093BRCA2 repeatPROSITEPS50138BRCA2_REPEATcoord: 318..352
score: 9.573099
IPR002093BRCA2 repeatPROSITEPS50138BRCA2_REPEATcoord: 197..231
score: 9.766994
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 837..859
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 738..778
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 531..548
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 531..591
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 371..441
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 283..322
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 408..424
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 826..859
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 733..778
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 686..702
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 648..709
IPR015525Breast cancer type 2 susceptibility proteinPANTHERPTHR11289BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2coord: 82..550

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1095contigP-wetherbeei_contig1095:4..2742 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1095.1.1mRNA_P-wetherbeei_contig1095.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1095 2..2742 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1095.1.1 ID=prot_P-wetherbeei_contig1095.1.1|Name=mRNA_P-wetherbeei_contig1095.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=913bp
PGICQDSRQRPLQPMQAIDPEVHANALVRGVAPQPSRPESGLFGVQRVPA
AANAGVFDGGGGSSSGGGNGSDGSAGSSSSNDGGTGVPISFSTSKGRRLH
VSAEGLARIEHTSQEPASIGEGTDGGAGDGRGVKRTSSAASIFGGASAML
APARLILPARMLPASGALLPGLGGCGSGSGSSGSGTSGWGGSSGSGGGGG
AISFSTGNGRPIHVSEESLARAERMFRESVDRADGAAAAVAPAPTAAPAS
ASHCETAFAQRGSGSGSAAASAVAALAGAAAAPTTNVPPPPRAGAAGQMT
ETSGDTGGGGRDSGGSCADSSAVSFSTGKGRRLHVSAESLARIEHMFQEP
TAGAEVAAAAAAAVPARPASGAGSGEGATNGGGSGASSGGVFASVTPLPP
PPLLPPQQHQRASRSFSAPLPSGQNGGGGSKGGRAAGRPETLLARALSTA
AVATGEVGAPAFHPPGAAASFGKSSGGSAGGITFRTAGKNNAVTASAASL
ASAQRWLEIATSLSCQSTLVTLAPAASSSVSNSRQSTGGSSNGGGSSRSG
AAWPEVATPRAAVGGGQMNSDFVDRRASGAGGDEAGGRQEIATGSSCLRA
WGAGAGSRHDSGCGGGAEAPRQFQLLPLPGGVSGAACSTPLRPYPASVGG
PQPIWDQTPGAADGGDGAGLVQQPPAAAGPVKLAQPATAPLPPPPPLPPP
AAATAHSSSSLDASVARAAAEAAQGVAAAAIARNAQTPDAPRWQQQQRWS
YGGQTPASASNRRNSTASSSSVARLNPYASRHSNPYALSPAPPAKRAAAP
YAAVPAAAAAAAAAVLTTNRSQQCAAAMPIGDSSQMRDAPPTGNSGNSHG
GGGSGSSSGSACFGDGGGCRRGVSSTPKVANPYATPRNLYGMPASQAQTP
PQPLWMLGVPPAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002093BRCA2_repeat
IPR015525BRCA2